RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 HNRNPMP52272 730 aaKnown RBP eCLIP14.03□□□□□ -0.162e-10■■□□□ 11.9
HNRNPU-224ENST00000640056 RBM19Q9Y4C8 960 aaKnown RBP14.03□□□□□ -0.16
HNRNPU-224ENST00000640056 CNTLNQ9NXG0 1405 aa14.03□□□□□ -0.16
HNRNPU-224ENST00000640056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.03□□□□□ -0.162e-10■■■□□ 16.6
HNRNPU-224ENST00000640056 ESF1Q9H501 851 aaKnown RBP14.02□□□□□ -0.16
HNRNPU-224ENST00000640056 RTEL1-TNFRSF6BF6WH68 1400 aa14.02□□□□□ -0.17
HNRNPU-224ENST00000640056 FER1L4A9Z1Z3 1794 aa14.02□□□□□ -0.17
HNRNPU-224ENST00000640056 KIDINS220Q9ULH0 1771 aa14.02□□□□□ -0.17
HNRNPU-224ENST00000640056 NCOA2Q15596 1464 aa14.01□□□□□ -0.17
HNRNPU-224ENST00000640056 ATP7AQ04656 1500 aa14.01□□□□□ -0.17
HNRNPU-224ENST00000640056 MBD5Q9P267 1494 aa14□□□□□ -0.17
HNRNPU-224ENST00000640056 TRIM52Q96A61 297 aa14□□□□□ -0.17
HNRNPU-224ENST00000640056 PPP6R1Q9UPN7 881 aa14□□□□□ -0.17
HNRNPU-224ENST00000640056 SUPT6HQ7KZ85 1726 aaKnown RBP13.99□□□□□ -0.17
HNRNPU-224ENST00000640056 INO80Q9ULG1 1556 aaPredicted RBP13.99□□□□□ -0.17
HNRNPU-224ENST00000640056 HIRIP3Q9BW71 556 aaPredicted RBP13.98□□□□□ -0.17
HNRNPU-224ENST00000640056 A2MP01023 1474 aa13.98□□□□□ -0.17
HNRNPU-224ENST00000640056 PLXNC1O60486 1568 aa13.97□□□□□ -0.17
HNRNPU-224ENST00000640056 CCDC141Q6ZP82 1450 aa13.96□□□□□ -0.17
HNRNPU-224ENST00000640056 ZNF644Q9H582 1327 aaPredicted RBP13.96□□□□□ -0.17
HNRNPU-224ENST00000640056 UHRF1BP1Q6BDS2 1440 aa13.95□□□□□ -0.18
HNRNPU-224ENST00000640056 UBAP1LF5GYI3 381 aa13.95□□□□□ -0.18
HNRNPU-224ENST00000640056 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
HNRNPU-224ENST00000640056 CAMSAP2Q08AD1 1489 aa13.94□□□□□ -0.18
HNRNPU-224ENST00000640056 TONSLQ96HA7 1378 aa13.94□□□□□ -0.18
HNRNPU-224ENST00000640056 NPATQ14207 1427 aa13.94□□□□□ -0.18
HNRNPU-224ENST00000640056 MIA2Q96PC5 1412 aa13.94□□□□□ -0.18
HNRNPU-224ENST00000640056 CEBPAP49715 358 aaPredicted RBP13.93□□□□□ -0.18
HNRNPU-224ENST00000640056 DHX29Q7Z478 1369 aaKnown RBP13.93□□□□□ -0.18
HNRNPU-224ENST00000640056 ARHGEF5Q12774 1597 aa13.93□□□□□ -0.18
HNRNPU-224ENST00000640056 PREX1Q8TCU6 1659 aa13.92□□□□□ -0.18
HNRNPU-224ENST00000640056 TSPY4P0CV99 314 aa13.92□□□□□ -0.18
HNRNPU-224ENST00000640056 TSPY10P0CW01 314 aa13.92□□□□□ -0.18
HNRNPU-224ENST00000640056 BCL11AQ9H165 835 aa13.91□□□□□ -0.18
HNRNPU-224ENST00000640056 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
HNRNPU-224ENST00000640056 PTPRTO14522 1441 aa13.91□□□□□ -0.18
HNRNPU-224ENST00000640056 FAM135AQ9P2D6 1515 aa13.91□□□□□ -0.18
HNRNPU-224ENST00000640056 LTBP4Q8N2S1 1624 aa13.91□□□□□ -0.18
HNRNPU-224ENST00000640056 ZMYM3Q14202 1370 aa13.9□□□□□ -0.18
HNRNPU-224ENST00000640056 MROH2AA6NES4 1674 aa13.9□□□□□ -0.18
HNRNPU-224ENST00000640056 MYOM3Q5VTT5 1437 aa13.9□□□□□ -0.18
HNRNPU-224ENST00000640056 FGD6Q6ZV73 1430 aa13.89□□□□□ -0.19
HNRNPU-224ENST00000640056 HFM1A2PYH4 1435 aa13.88□□□□□ -0.19
HNRNPU-224ENST00000640056 C3P01024 1663 aa13.87□□□□□ -0.19
HNRNPU-224ENST00000640056 GGT6Q6P531 493 aa13.87□□□□□ -0.19
HNRNPU-224ENST00000640056 HSPA1LP34931 641 aa13.86□□□□□ -0.19
HNRNPU-224ENST00000640056 MAST1Q9Y2H9 1570 aa13.85□□□□□ -0.19
HNRNPU-224ENST00000640056 IFFO2Q5TF58 517 aa13.85□□□□□ -0.19
HNRNPU-224ENST00000640056 FANCIQ9NVI1 1328 aa13.85□□□□□ -0.19
HNRNPU-224ENST00000640056 SETD1BQ9UPS6 1966 aaKnown RBP13.85□□□□□ -0.19
HNRNPU-224ENST00000640056 ERICH6BQ5W0A0 696 aa13.85□□□□□ -0.19
HNRNPU-224ENST00000640056 MSH5O43196 834 aa13.84□□□□□ -0.19
HNRNPU-224ENST00000640056 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
HNRNPU-224ENST00000640056 PTPRKQ15262 1439 aa13.84□□□□□ -0.19
HNRNPU-224ENST00000640056 KIF3BO15066 747 aa13.83□□□□□ -0.2
HNRNPU-224ENST00000640056 PTPN23Q9H3S7 1636 aa13.82□□□□□ -0.2
HNRNPU-224ENST00000640056 NAIPQ13075 1403 aa13.81□□□□□ -0.2
HNRNPU-224ENST00000640056 KDM5DQ9BY66 1539 aa13.81□□□□□ -0.2
HNRNPU-224ENST00000640056 SHANK2Q9UPX8 1470 aa13.81□□□□□ -0.2
HNRNPU-224ENST00000640056 NCOA1Q15788 1441 aa13.8□□□□□ -0.2
HNRNPU-224ENST00000640056 CLTCQ00610 1675 aaKnown RBP13.8□□□□□ -0.2
HNRNPU-224ENST00000640056 WASHC2CQ9Y4E1 1318 aa13.8□□□□□ -0.2
HNRNPU-224ENST00000640056 PLA2R1Q13018 1463 aa13.79□□□□□ -0.2
HNRNPU-224ENST00000640056 PZPP20742 1482 aa13.79□□□□□ -0.2
HNRNPU-224ENST00000640056 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
HNRNPU-224ENST00000640056 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
HNRNPU-224ENST00000640056 STRCQ7RTU9 1775 aa13.78□□□□□ -0.2
HNRNPU-224ENST00000640056 EIF2AK4Q9P2K8 1649 aaKnown RBP13.77□□□□□ -0.2
HNRNPU-224ENST00000640056 DUOX2Q9NRD8 1548 aa13.77□□□□□ -0.2
HNRNPU-224ENST00000640056 PKD2Q13563 968 aa13.77□□□□□ -0.21
HNRNPU-224ENST00000640056 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
HNRNPU-224ENST00000640056 PPP4R2Q9NY27 417 aa13.76□□□□□ -0.21
HNRNPU-224ENST00000640056 ABCC5O15440 1437 aa13.76□□□□□ -0.21
HNRNPU-224ENST00000640056 ZNF142P52746 1687 aaPredicted RBP13.76□□□□□ -0.21
HNRNPU-224ENST00000640056 RNF17Q9BXT8 1623 aaKnown RBP13.75□□□□□ -0.21
HNRNPU-224ENST00000640056 A2ML1A8K2U0 1454 aa13.75□□□□□ -0.21
HNRNPU-224ENST00000640056 CEP170BQ9Y4F5 1589 aaPredicted RBP13.75□□□□□ -0.21
HNRNPU-224ENST00000640056 ERBINQ96RT1 1412 aa13.75□□□□□ -0.21
HNRNPU-224ENST00000640056 TNRQ92752 1358 aa13.75□□□□□ -0.21
HNRNPU-224ENST00000640056 MYO3AQ8NEV4 1616 aa13.75□□□□□ -0.21
HNRNPU-224ENST00000640056 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
HNRNPU-224ENST00000640056 RGS17Q9UGC6 210 aaPredicted RBP13.74□□□□□ -0.21
HNRNPU-224ENST00000640056 DAPK1P53355 1430 aa13.74□□□□□ -0.21
HNRNPU-224ENST00000640056 CAMSAP1Q5T5Y3 1602 aa13.74□□□□□ -0.21
HNRNPU-224ENST00000640056 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.212e-12■■■■□ 22
HNRNPU-224ENST00000640056 KIF15Q9NS87 1388 aa13.74□□□□□ -0.21
HNRNPU-224ENST00000640056 NLRP1Q9C000 1473 aa13.73□□□□□ -0.21
HNRNPU-224ENST00000640056 ZC3H13Q5T200 1668 aaKnown RBP13.73□□□□□ -0.21
HNRNPU-224ENST00000640056 ANKRD30AQ9BXX3 1397 aa13.72□□□□□ -0.21
HNRNPU-224ENST00000640056 DNMT1P26358 1616 aaKnown RBP13.71□□□□□ -0.21
HNRNPU-224ENST00000640056 ERICH6Q7L0X2 663 aa13.71□□□□□ -0.21
HNRNPU-224ENST00000640056 ABCC3O15438 1527 aa13.71□□□□□ -0.21
HNRNPU-224ENST00000640056 FBXO31Q5XUX0 539 aaPredicted RBP13.69□□□□□ -0.22
HNRNPU-224ENST00000640056 THEMISQ8N1K5 641 aaPredicted RBP13.69□□□□□ -0.22
HNRNPU-224ENST00000640056 ARHGAP31Q2M1Z3 1444 aa13.69□□□□□ -0.22
HNRNPU-224ENST00000640056 PRKRIP1Q9H875 184 aaPredicted RBP13.69□□□□□ -0.22
HNRNPU-224ENST00000640056 CROCC2H7BZ55 1655 aa13.69□□□□□ -0.22
HNRNPU-224ENST00000640056 RRP7BPQ9NSQ0 103 aa13.68□□□□□ -0.22
HNRNPU-224ENST00000640056 PRDM15P57071 1507 aaPredicted RBP13.68□□□□□ -0.22
HNRNPU-224ENST00000640056 KANK1Q14678 1352 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms