RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 THSD4Q6ZMP0 1018 aa13.27□□□□□ -0.29
SCARB2-217ENST00000639324 CFAP44Q96MT7 982 aa13.27□□□□□ -0.29
SCARB2-217ENST00000639324 PTPN5P54829 565 aa13.26□□□□□ -0.29
SCARB2-217ENST00000639324 MRPL50Q8N5N7 158 aaKnown RBP13.26□□□□□ -0.29
SCARB2-217ENST00000639324 DDX12PQ92771 950 aa13.26□□□□□ -0.29
SCARB2-217ENST00000639324 PDIA6Q15084 440 aa13.25□□□□□ -0.29
SCARB2-217ENST00000639324 C6orf132Q5T0Z8 1188 aa13.25□□□□□ -0.29
SCARB2-217ENST00000639324 EPAS1Q99814 870 aa13.25□□□□□ -0.29
SCARB2-217ENST00000639324 RABGEF1Q9UJ41 708 aa13.24□□□□□ -0.29
SCARB2-217ENST00000639324 WNT2BQ93097 391 aa13.23□□□□□ -0.29
SCARB2-217ENST00000639324 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
SCARB2-217ENST00000639324 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.29
SCARB2-217ENST00000639324 GOLGA8CPA6NN73 597 aa13.19□□□□□ -0.3
SCARB2-217ENST00000639324 E2F4Q16254 413 aa13.19□□□□□ -0.3
SCARB2-217ENST00000639324 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
SCARB2-217ENST00000639324 ARIH1Q9Y4X5 557 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-217ENST00000639324 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-217ENST00000639324 TSR1Q2NL82 804 aaKnown RBP13.17□□□□□ -0.3
SCARB2-217ENST00000639324 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
SCARB2-217ENST00000639324 NBR1Q14596 966 aa13.16□□□□□ -0.3
SCARB2-217ENST00000639324 SPDYE16A6NNV3 312 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-217ENST00000639324 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
SCARB2-217ENST00000639324 ONECUT3O60422 494 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-217ENST00000639324 BCAMP50895 628 aa13.11□□□□□ -0.31
SCARB2-217ENST00000639324 LAPTM4BQ86VI4 370 aa13.11□□□□□ -0.31
SCARB2-217ENST00000639324 SEPT9Q9UHD8 586 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-217ENST00000639324 MAP3K7O43318 606 aa13.09□□□□□ -0.31
SCARB2-217ENST00000639324 ANKK1Q8NFD2 765 aa13.09□□□□□ -0.31
SCARB2-217ENST00000639324 ZFRQ96KR1 1074 aaKnown RBP13.09□□□□□ -0.31
SCARB2-217ENST00000639324 WDR70Q9NW82 654 aa13.09□□□□□ -0.31
SCARB2-217ENST00000639324 TSKSQ9UJT2 592 aa13.09□□□□□ -0.31
SCARB2-217ENST00000639324 SOWAHBA6NEL2 793 aa13.07□□□□□ -0.32
SCARB2-217ENST00000639324 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
SCARB2-217ENST00000639324 GRXCR2A6NFK2 248 aa13.05□□□□□ -0.32
SCARB2-217ENST00000639324 FAM198AQ9UFP1 575 aa13.05□□□□□ -0.32
SCARB2-217ENST00000639324 OSBPP22059 807 aa13.04□□□□□ -0.32
SCARB2-217ENST00000639324 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
SCARB2-217ENST00000639324 C3orf80F5H4A9 247 aa13.03□□□□□ -0.32
SCARB2-217ENST00000639324 FAM98CQ17RN3 349 aaKnown RBP13.03□□□□□ -0.32
SCARB2-217ENST00000639324 CDHR5Q9HBB8 845 aa13.02□□□□□ -0.33
SCARB2-217ENST00000639324 CDCA7LQ96GN5 454 aa13□□□□□ -0.33
SCARB2-217ENST00000639324 WBP1LQ9NX94 342 aa13□□□□□ -0.33
SCARB2-217ENST00000639324 PRSS12P56730 875 aa12.98□□□□□ -0.33
SCARB2-217ENST00000639324 A0A0G2JS52 829 aa12.97□□□□□ -0.33
SCARB2-217ENST00000639324 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-217ENST00000639324 PACS2Q86VP3 889 aa12.97□□□□□ -0.33
SCARB2-217ENST00000639324 SMAPO00193 183 aa12.96□□□□□ -0.33
SCARB2-217ENST00000639324 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-217ENST00000639324 CERKQ8TCT0 537 aa12.93□□□□□ -0.34
SCARB2-217ENST00000639324 KCNV2Q8TDN2 545 aa12.92□□□□□ -0.34
SCARB2-217ENST00000639324 LRCH3Q96II8 777 aa12.92□□□□□ -0.34
SCARB2-217ENST00000639324 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
SCARB2-217ENST00000639324 HPS5Q9UPZ3 1129 aa12.92□□□□□ -0.34
SCARB2-217ENST00000639324 NYAP1Q6ZVC0 841 aa12.91□□□□□ -0.34
SCARB2-217ENST00000639324 TSR3Q9UJK0 312 aaKnown RBP12.91□□□□□ -0.34
SCARB2-217ENST00000639324 TATDN2Q93075 761 aa12.9□□□□□ -0.34
SCARB2-217ENST00000639324 MLLT3P42568 568 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-217ENST00000639324 SAMD7Q7Z3H4 446 aa12.88□□□□□ -0.35
SCARB2-217ENST00000639324 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
SCARB2-217ENST00000639324 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
SCARB2-217ENST00000639324 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
SCARB2-217ENST00000639324 PNMA3Q9UL41 463 aa12.87□□□□□ -0.35
SCARB2-217ENST00000639324 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
SCARB2-217ENST00000639324 RGS20O76081 388 aa12.85□□□□□ -0.35
SCARB2-217ENST00000639324 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
SCARB2-217ENST00000639324 PADI6Q6TGC4 694 aa12.84□□□□□ -0.35
SCARB2-217ENST00000639324 PPP4CP60510 307 aa12.8□□□□□ -0.36
SCARB2-217ENST00000639324 KCNC4Q03721 635 aa12.8□□□□□ -0.36
SCARB2-217ENST00000639324 SLC24A1O60721 1099 aa12.79□□□□□ -0.36
SCARB2-217ENST00000639324 TJAP1Q5JTD0 557 aa12.76□□□□□ -0.37
SCARB2-217ENST00000639324 EYA1Q99502 592 aa12.75□□□□□ -0.37
SCARB2-217ENST00000639324 PTGDRQ13258 359 aa12.74□□□□□ -0.37
SCARB2-217ENST00000639324 APLP1P51693 650 aa12.72□□□□□ -0.37
SCARB2-217ENST00000639324 SWT1Q5T5J6 900 aaKnown RBP12.72□□□□□ -0.37
SCARB2-217ENST00000639324 SEMA3EO15041 775 aa12.7□□□□□ -0.38
SCARB2-217ENST00000639324 RNF40O75150 1001 aa12.7□□□□□ -0.38
SCARB2-217ENST00000639324 MTRQ99707 1265 aa12.7□□□□□ -0.38
SCARB2-217ENST00000639324 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-217ENST00000639324 PLCB2Q00722 1185 aa12.67□□□□□ -0.38
SCARB2-217ENST00000639324 P3H3Q8IVL6 736 aa12.66□□□□□ -0.38
SCARB2-217ENST00000639324 ZNF516Q92618 1163 aa12.66□□□□□ -0.38
SCARB2-217ENST00000639324 IL21Q9HBE4 155 aa12.65□□□□□ -0.38
SCARB2-217ENST00000639324 NISCHQ9Y2I1 1504 aa12.64□□□□□ -0.39
SCARB2-217ENST00000639324 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
SCARB2-217ENST00000639324 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
SCARB2-217ENST00000639324 FAM161AQ3B820 660 aa12.63□□□□□ -0.39
SCARB2-217ENST00000639324 NUTM2FA1L443 756 aa12.62□□□□□ -0.39
SCARB2-217ENST00000639324 SLF2Q8IX21 1173 aa12.62□□□□□ -0.39
SCARB2-217ENST00000639324 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
SCARB2-217ENST00000639324 PPP1R18Q6NYC8 613 aa12.58□□□□□ -0.4
SCARB2-217ENST00000639324 TMEM134Q9H6X4 195 aa12.58□□□□□ -0.4
SCARB2-217ENST00000639324 TESPA1A2RU30 521 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-217ENST00000639324 DNAJB2P25686 324 aa12.57□□□□□ -0.4
SCARB2-217ENST00000639324 COPS2P61201 443 aa12.57□□□□□ -0.4
SCARB2-217ENST00000639324 RCCD1A6NED2 376 aa12.55□□□□□ -0.4
SCARB2-217ENST00000639324 FCHSD2O94868 740 aa12.55□□□□□ -0.4
SCARB2-217ENST00000639324 RBM46Q8TBY0 533 aaKnown RBP12.55□□□□□ -0.4
SCARB2-217ENST00000639324 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
SCARB2-217ENST00000639324 NECTIN2Q92692 538 aa12.54□□□□□ -0.4
SCARB2-217ENST00000639324 GPR37O15354 613 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms