RNA–Protein interactions for RNA: ENST00000639092.1

ARHGEF9-238, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 4,657 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-238	ENST00000639092	ERICH6B	Q5W0A0	696 aa		10.94	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	HFM1	A2PYH4	1435 aa		10.93	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	ROCK1	Q13464	1354 aa		10.93	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	PAK3	O75914	559 aa	Predicted RBP	10.93	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	EPRS	P07814	1512 aa	Known RBP	10.93	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	ARHGAP5	Q13017	1502 aa		10.92	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	THOC2	Q8NI27	1593 aa	Known RBP	10.92	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	KCNJ4	P48050	445 aa		10.92	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	GOLGA2	Q08379	1002 aa		10.92	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	FGD1	P98174	961 aa		10.92	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	CSB-PGBD3	P0DP91	1061 aa		10.91	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	CYB5RL	Q6IPT4	315 aa		10.91	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	NLRP13	Q86W25	1043 aa		10.91	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	TRIM44	Q96DX7	344 aa	Predicted RBP	10.9	□□□□□ -0.66
ARHGEF9-238	ENST00000639092	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	WDR97	A6NE52	1622 aa		10.89	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	NGDN	Q8NEJ9	315 aa	Known RBP	10.89	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	HDAC5	Q9UQL6	1122 aa		10.89	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	MCC	P23508	829 aa		10.87	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	LMOD3	Q0VAK6	560 aa		10.87	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	B4GALNT3	Q6L9W6	998 aa		10.87	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	C9orf84	Q5VXU9	1444 aa		10.87	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	NGEF	Q8N5V2	710 aa		10.87	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	HSP90AB1	P08238	724 aa	Known RBP	10.86	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	PDE3B	Q13370	1112 aa		10.86	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	STK31	Q9BXU1	1019 aa		10.86	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	RCAN3	Q9UKA8	241 aa		10.86	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	DNAJC5B	Q9UF47	199 aa		10.86	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	FAM69C	Q0P6D2	419 aa		10.85	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	PCF11	O94913	1555 aa	Known RBP	10.84	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	DAPK1	P53355	1430 aa		10.84	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	TRAK1	Q9UPV9	953 aa		10.84	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	ZNF644	Q9H582	1327 aa	Predicted RBP	10.84	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	RWDD1	Q9H446	243 aa	Predicted RBP	10.84	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	PTMA	P06454	111 aa	Known RBP	10.84	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	HSCB	Q8IWL3	235 aa		10.84	□□□□□ -0.67
ARHGEF9-238	ENST00000639092	KIAA1107	Q9UPP5	1409 aa		10.83	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	USP47	Q96K76	1375 aa		10.83	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	AMPH	P49418	695 aa		10.83	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	EVC2	Q86UK5	1308 aa		10.83	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	KIF14	Q15058	1648 aa		10.82	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	AKNA	Q7Z591	1439 aa		10.82	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	ST20-MTHFS	A0A0A6YYL1	179 aa		10.82	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	CCDC141	Q6ZP82	1450 aa		10.81	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	GLIPR1L2	Q4G1C9	344 aa		10.81	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	HMMR	O75330	724 aa		10.81	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.81	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	KIAA1211	Q6ZU35	1233 aa		10.81	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.81	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.8	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	GOLGA6L4	A6NEF3	574 aa		10.8	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	ITPRIP	Q8IWB1	547 aa		10.8	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	UGGT2	Q9NYU1	1516 aa		10.8	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	SMC4	Q9NTJ3	1288 aa		10.8	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	PMFBP1	Q8TBY8	1022 aa		10.79	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	RPGRIP1L	Q68CZ1	1315 aa		10.79	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	NOP58	Q9Y2X3	529 aa	Known RBP	10.79	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	CGNL1	Q0VF96	1302 aa		10.79	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.79	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	NRDC	O43847	1150 aa		10.79	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	SLC52A1	Q9NWF4	448 aa		10.78	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	WASHC2A	Q641Q2	1341 aa		10.78	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	WDR62	O43379	1518 aa		10.78	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.78	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	SCAPER	Q9BY12	1400 aa		10.78	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	CCDC9	Q9Y3X0	531 aa	Known RBP	10.78	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.77	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	COG3	Q96JB2	828 aa		10.77	□□□□□ -0.68
ARHGEF9-238	ENST00000639092	ADAMTS12	P58397	1594 aa		10.77	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.77	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	CDK13	Q14004	1512 aa	Known RBP	10.77	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	NAIP	Q13075	1403 aa		10.77	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	GOLGA6L6	A8MZA4	724 aa		10.76	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	PANK3	Q9H999	370 aa		10.76	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	PTPN23	Q9H3S7	1636 aa		10.76	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	TCERG1	O14776	1098 aa	Known RBP	10.76	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	PPP6R1	Q9UPN7	881 aa		10.76	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	CTTNBP2	Q8WZ74	1663 aa		10.76	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	NUTM2F	A1L443	756 aa		10.76	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	APBB1	O00213	710 aa		10.76	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	GPATCH3	Q96I76	525 aa		10.76	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	TMX4	Q9H1E5	349 aa	Predicted RBP	10.76	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	AFAP1	Q8N556	730 aa		10.75	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	POGZ	Q7Z3K3	1410 aa		10.75	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	ANKRD30B	Q9BXX2	1392 aa		10.75	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	CAMSAP2	Q08AD1	1489 aa		10.75	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	PLB1	Q6P1J6	1458 aa		10.75	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	TPRN	Q4KMQ1	711 aa		10.74	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	GORAB	Q5T7V8	394 aa		10.74	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	LTV1	Q96GA3	475 aa	Predicted RBP	10.74	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	TAF7L	Q5H9L4	462 aa		10.74	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.74	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	CCDC7	Q96M83	1385 aa		10.74	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	TAOK2	Q9UL54	1235 aa		10.73	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	RAPGEF6	Q8TEU7	1601 aa		10.73	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.73	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	CCDC146	Q8IYE0	955 aa		10.73	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	PLCB2	Q00722	1185 aa		10.72	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.72	□□□□□ -0.69
ARHGEF9-238	ENST00000639092	ABCC5	O15440	1437 aa		10.72	□□□□□ -0.69

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