RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 ST20-MTHFSA0A0A6YYL1 179 aa21.45■■□□□ 1.02
HNRNPU-217ENST00000638952 SLC4A3P48751 1232 aa21.45■■□□□ 1.02
HNRNPU-217ENST00000638952 RRP1P56182 461 aaKnown RBP21.45■■□□□ 1.02
HNRNPU-217ENST00000638952 PANK3Q9H999 370 aa21.43■■□□□ 1.02
HNRNPU-217ENST00000638952 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
HNRNPU-217ENST00000638952 EFCAB2Q5VUJ9 269 aa21.42■■□□□ 1.02
HNRNPU-217ENST00000638952 CENPQQ7L2Z9 268 aaPredicted RBP21.42■■□□□ 1.02
HNRNPU-217ENST00000638952 RRP7AQ9Y3A4 280 aaKnown RBP21.41■■□□□ 1.02
HNRNPU-217ENST00000638952 NPHP1O15259 732 aa21.41■■□□□ 1.02
HNRNPU-217ENST00000638952 CRBNQ96SW2 442 aa21.41■■□□□ 1.02
HNRNPU-217ENST00000638952 PDE4CQ08493 712 aa21.4■■□□□ 1.02
HNRNPU-217ENST00000638952 FAM161AQ3B820 660 aa21.4■■□□□ 1.02
HNRNPU-217ENST00000638952 NUTM2DQ5VT03 806 aaPredicted RBP21.4■■□□□ 1.02
HNRNPU-217ENST00000638952 KIF3BO15066 747 aa21.39■■□□□ 1.01
HNRNPU-217ENST00000638952 TRIM6-TRIM34B2RNG4 842 aa21.38■■□□□ 1.01
HNRNPU-217ENST00000638952 HSP90B1P14625 803 aaKnown RBP21.38■■□□□ 1.01
HNRNPU-217ENST00000638952 NOL8Q76FK4 1167 aaKnown RBP21.38■■□□□ 1.01
HNRNPU-217ENST00000638952 USP47Q96K76 1375 aa21.37■■□□□ 1.01
HNRNPU-217ENST00000638952 GSE1Q14687 1217 aa21.37■■□□□ 1.01
HNRNPU-217ENST00000638952 FANCIQ9NVI1 1328 aa21.37■■□□□ 1.01
HNRNPU-217ENST00000638952 CSPP1Q1MSJ5 1256 aa21.37■■□□□ 1.01
HNRNPU-217ENST00000638952 PHF14O94880 888 aa21.36■■□□□ 1.01
HNRNPU-217ENST00000638952 TPM3P06753 285 aa21.36■■□□□ 1.01
HNRNPU-217ENST00000638952 PAK3O75914 559 aaPredicted RBP21.35■■□□□ 1.01
HNRNPU-217ENST00000638952 TERF2IPQ9NYB0 399 aa21.35■■□□□ 1.01
HNRNPU-217ENST00000638952 SMARCA4P51532 1647 aa21.35■■□□□ 1.01
HNRNPU-217ENST00000638952 PATL2C9JE40 543 aaKnown RBP21.35■■□□□ 1.01
HNRNPU-217ENST00000638952 STK31Q9BXU1 1019 aa21.35■■□□□ 1.01
HNRNPU-217ENST00000638952 ISY1Q9ULR0 285 aaKnown RBP21.35■■□□□ 1.01
HNRNPU-217ENST00000638952 CCDC144AA2RUR9 1427 aa21.34■■□□□ 1.01
HNRNPU-217ENST00000638952 SLC4A10Q6U841 1118 aa21.34■■□□□ 1.01
HNRNPU-217ENST00000638952 BCL2L13Q9BXK5 485 aa21.33■■□□□ 1.01
HNRNPU-217ENST00000638952 SPAG9O60271 1321 aaKnown RBP21.33■■□□□ 1.01
HNRNPU-217ENST00000638952 DDX11L8A8MPP1 907 aa21.33■■□□□ 1.01
HNRNPU-217ENST00000638952 HMMRO75330 724 aa21.33■■□□□ 1
HNRNPU-217ENST00000638952 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
HNRNPU-217ENST00000638952 GPS2Q13227 327 aa21.31■■□□□ 1
HNRNPU-217ENST00000638952 FOXD4L5Q5VV16 416 aaPredicted RBP21.31■■□□□ 1
HNRNPU-217ENST00000638952 FOXD4L4Q8WXT5 416 aaPredicted RBP21.31■■□□□ 1
HNRNPU-217ENST00000638952 FAM13BQ9NYF5 915 aa21.31■■□□□ 1
HNRNPU-217ENST00000638952 PRM3Q9NNZ6 103 aa21.3■■□□□ 1
HNRNPU-217ENST00000638952 TRAK1Q9UPV9 953 aa21.3■■□□□ 1
HNRNPU-217ENST00000638952 CREBRFQ8IUR6 639 aa21.3■■□□□ 1
HNRNPU-217ENST00000638952 CCAR2Q8N163 923 aaKnown RBP21.3■■□□□ 1
HNRNPU-217ENST00000638952 CCDC34Q96HJ3 373 aa21.3■■□□□ 1
HNRNPU-217ENST00000638952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.29■■□□□ 1
HNRNPU-217ENST00000638952 E9PSI1 815 aa21.29■■□□□ 1
HNRNPU-217ENST00000638952 RSPH4AQ5TD94 716 aa21.28■■□□□ 1
HNRNPU-217ENST00000638952 ST18O60284 1047 aa21.27■■□□□ 1
HNRNPU-217ENST00000638952 COG6Q9Y2V7 657 aa21.27■■□□□ 1
HNRNPU-217ENST00000638952 ATAD2BQ9ULI0 1458 aa21.27■■□□□ 1
HNRNPU-217ENST00000638952 GPATCH3Q96I76 525 aa21.26■□□□□ 0.99
HNRNPU-217ENST00000638952 LMOD3Q0VAK6 560 aa21.25■□□□□ 0.99
HNRNPU-217ENST00000638952 TEX35Q5T0J7 233 aa21.24■□□□□ 0.99
HNRNPU-217ENST00000638952 ANKRD45Q5TZF3 282 aa21.24■□□□□ 0.99
HNRNPU-217ENST00000638952 ZKSCAN2Q63HK3 967 aa21.23■□□□□ 0.99
HNRNPU-217ENST00000638952 ZNF330Q9Y3S2 320 aaPredicted RBP21.23■□□□□ 0.99
HNRNPU-217ENST00000638952 DDX49Q9Y6V7 483 aaKnown RBP21.22■□□□□ 0.99
HNRNPU-217ENST00000638952 ZNF592Q92610 1267 aa21.22■□□□□ 0.99
HNRNPU-217ENST00000638952 WASHC2CQ9Y4E1 1318 aa21.21■□□□□ 0.99
HNRNPU-217ENST00000638952 APAF1O14727 1248 aa21.21■□□□□ 0.99
HNRNPU-217ENST00000638952 CEP89Q96ST8 783 aa21.21■□□□□ 0.99
HNRNPU-217ENST00000638952 ELL2O00472 640 aaPredicted RBP21.21■□□□□ 0.99
HNRNPU-217ENST00000638952 CCDC7Q96M83 1385 aa21.21■□□□□ 0.99
HNRNPU-217ENST00000638952 KIF21BO75037 1637 aa21.2■□□□□ 0.99
HNRNPU-217ENST00000638952 CHMP3Q9Y3E7 222 aa21.2■□□□□ 0.99
HNRNPU-217ENST00000638952 CGNL1Q0VF96 1302 aa21.2■□□□□ 0.98
HNRNPU-217ENST00000638952 SKOR2Q2VWA4 1001 aaPredicted RBP21.2■□□□□ 0.98
HNRNPU-217ENST00000638952 CSB-PGBD3P0DP91 1061 aa21.2■□□□□ 0.98
HNRNPU-217ENST00000638952 RASSF8Q8NHQ8 419 aa21.19■□□□□ 0.98
HNRNPU-217ENST00000638952 CNTLNQ9NXG0 1405 aa21.19■□□□□ 0.98
HNRNPU-217ENST00000638952 KIF7Q2M1P5 1343 aa21.18■□□□□ 0.98
HNRNPU-217ENST00000638952 APPP05067 770 aa21.18■□□□□ 0.98
HNRNPU-217ENST00000638952 PKNOX2Q96KN3 472 aa21.18■□□□□ 0.98
HNRNPU-217ENST00000638952 GORABQ5T7V8 394 aa21.16■□□□□ 0.98
HNRNPU-217ENST00000638952 CCDC70Q6NSX1 233 aa21.16■□□□□ 0.98
HNRNPU-217ENST00000638952 GOLGA6L19H0YKK7 550 aa21.16■□□□□ 0.98
HNRNPU-217ENST00000638952 KIF16BQ96L93 1317 aa21.16■□□□□ 0.98
HNRNPU-217ENST00000638952 RILPL2Q969X0 211 aa21.15■□□□□ 0.98
HNRNPU-217ENST00000638952 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
HNRNPU-217ENST00000638952 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
HNRNPU-217ENST00000638952 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.15■□□□□ 0.98
HNRNPU-217ENST00000638952 CHMP4AQ9BY43 222 aa21.15■□□□□ 0.98
HNRNPU-217ENST00000638952 UACAQ9BZF9 1416 aa21.15■□□□□ 0.98
HNRNPU-217ENST00000638952 NOM1Q5C9Z4 860 aaKnown RBP21.15■□□□□ 0.98
HNRNPU-217ENST00000638952 AMPHP49418 695 aa21.14■□□□□ 0.97
HNRNPU-217ENST00000638952 PES1O00541 588 aaKnown RBP21.13■□□□□ 0.97
HNRNPU-217ENST00000638952 SF3A1Q15459 793 aaKnown RBP21.13■□□□□ 0.97
HNRNPU-217ENST00000638952 LTV1Q96GA3 475 aaPredicted RBP21.13■□□□□ 0.97
HNRNPU-217ENST00000638952 NUTM2FA1L443 756 aa21.13■□□□□ 0.97
HNRNPU-217ENST00000638952 FOXD4L6Q3SYB3 417 aaPredicted RBP21.13■□□□□ 0.97
HNRNPU-217ENST00000638952 FOXD4L3Q6VB84 417 aaPredicted RBP21.13■□□□□ 0.97
HNRNPU-217ENST00000638952 BECN2A8MW95 431 aa21.12■□□□□ 0.97
HNRNPU-217ENST00000638952 TSR1Q2NL82 804 aaKnown RBP21.12■□□□□ 0.97
HNRNPU-217ENST00000638952 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
HNRNPU-217ENST00000638952 NGDNQ8NEJ9 315 aaKnown RBP21.12■□□□□ 0.97
HNRNPU-217ENST00000638952 FAM43AQ8N2R8 423 aa21.11■□□□□ 0.97
HNRNPU-217ENST00000638952 HDAC5Q9UQL6 1122 aa21.11■□□□□ 0.97
HNRNPU-217ENST00000638952 RRP12Q5JTH9 1297 aaKnown RBP21.11■□□□□ 0.97
HNRNPU-217ENST00000638952 TPD52L1Q16890 204 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms