RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ZNF771Q7L3S4 317 aaPredicted RBP20.29■□□□□ 0.84
CACNA1A-258ENST00000638029 TIMELESSQ9UNS1 1208 aa20.29■□□□□ 0.84
CACNA1A-258ENST00000638029 ZNF592Q92610 1267 aa20.29■□□□□ 0.84
CACNA1A-258ENST00000638029 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
CACNA1A-258ENST00000638029 SKIDA1Q1XH10 827 aa20.28■□□□□ 0.84
CACNA1A-258ENST00000638029 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-258ENST00000638029 AKAP17AQ02040 695 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-258ENST00000638029 DHX37Q8IY37 1157 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-258ENST00000638029 NGDNQ8NEJ9 315 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-258ENST00000638029 TMEM132AQ24JP5 1023 aa20.27■□□□□ 0.84
CACNA1A-258ENST00000638029 HDGFL2Q7Z4V5 671 aaPredicted RBP20.27■□□□□ 0.84
CACNA1A-258ENST00000638029 ZFYVE27Q5T4F4 411 aa20.27■□□□□ 0.84
CACNA1A-258ENST00000638029 MTMR7Q9Y216 660 aa20.27■□□□□ 0.84
CACNA1A-258ENST00000638029 SPAG9O60271 1321 aaKnown RBP20.27■□□□□ 0.83
CACNA1A-258ENST00000638029 CCNB3Q8WWL7 1395 aa20.26■□□□□ 0.83
CACNA1A-258ENST00000638029 GBP4Q96PP9 640 aa20.26■□□□□ 0.83
CACNA1A-258ENST00000638029 ODF2Q5BJF6 829 aa20.25■□□□□ 0.83
CACNA1A-258ENST00000638029 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
CACNA1A-258ENST00000638029 FYB1O15117 783 aa20.24■□□□□ 0.83
CACNA1A-258ENST00000638029 AMPHP49418 695 aa20.24■□□□□ 0.83
CACNA1A-258ENST00000638029 AMOTL1Q8IY63 956 aa20.24■□□□□ 0.83
CACNA1A-258ENST00000638029 H3BQV1 296 aa20.23■□□□□ 0.83
CACNA1A-258ENST00000638029 IFFO2Q5TF58 517 aa20.23■□□□□ 0.83
CACNA1A-258ENST00000638029 IPO8O15397 1037 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-258ENST00000638029 AK7Q96M32 723 aa20.23■□□□□ 0.83
CACNA1A-258ENST00000638029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
CACNA1A-258ENST00000638029 SYAP1Q96A49 352 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-258ENST00000638029 STK31Q9BXU1 1019 aa20.22■□□□□ 0.83
CACNA1A-258ENST00000638029 APPP05067 770 aa20.22■□□□□ 0.83
CACNA1A-258ENST00000638029 TPM2P07951 284 aa20.21■□□□□ 0.83
CACNA1A-258ENST00000638029 EEA1Q15075 1411 aa20.21■□□□□ 0.83
CACNA1A-258ENST00000638029 FOSBP53539 338 aa20.21■□□□□ 0.83
CACNA1A-258ENST00000638029 RBM19Q9Y4C8 960 aaKnown RBP20.21■□□□□ 0.83
CACNA1A-258ENST00000638029 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-258ENST00000638029 U2AF1L5P0DN76 240 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-258ENST00000638029 U2AF1Q01081 240 aaKnown RBP eCLIP20.2■□□□□ 0.82
CACNA1A-258ENST00000638029 MCTP1Q6DN14 999 aa20.2■□□□□ 0.82
CACNA1A-258ENST00000638029 NAP1L1P55209 391 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-258ENST00000638029 CALD1Q05682 793 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-258ENST00000638029 CT47A1Q5JQC4 288 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-258ENST00000638029 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.18■□□□□ 0.82
CACNA1A-258ENST00000638029 PLCD4Q9BRC7 762 aa20.18■□□□□ 0.82
CACNA1A-258ENST00000638029 KDM4AO75164 1064 aa20.18■□□□□ 0.82
CACNA1A-258ENST00000638029 CCDC97Q96F63 343 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-258ENST00000638029 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
CACNA1A-258ENST00000638029 GOLGA6L3A6NEY3 463 aa20.17■□□□□ 0.82
CACNA1A-258ENST00000638029 IKQ13123 557 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-258ENST00000638029 RILPL2Q969X0 211 aa20.16■□□□□ 0.82
CACNA1A-258ENST00000638029 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
CACNA1A-258ENST00000638029 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
CACNA1A-258ENST00000638029 EID1Q9Y6B2 187 aa20.14■□□□□ 0.82
CACNA1A-258ENST00000638029 USP35Q9P2H5 1018 aa20.14■□□□□ 0.81
CACNA1A-258ENST00000638029 KIF16BQ96L93 1317 aa20.13■□□□□ 0.81
CACNA1A-258ENST00000638029 FAM184AQ8NB25 1140 aa20.13■□□□□ 0.81
CACNA1A-258ENST00000638029 WWC2Q6AWC2 1192 aa20.12■□□□□ 0.81
CACNA1A-258ENST00000638029 FHAD1B1AJZ9 1412 aa20.12■□□□□ 0.81
CACNA1A-258ENST00000638029 CCDC70Q6NSX1 233 aa20.12■□□□□ 0.81
CACNA1A-258ENST00000638029 KTN1Q86UP2 1357 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-258ENST00000638029 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-258ENST00000638029 GOLGA6L19H0YKK7 550 aa20.1■□□□□ 0.81
CACNA1A-258ENST00000638029 SYNE3Q6ZMZ3 975 aa20.1■□□□□ 0.81
CACNA1A-258ENST00000638029 MAP7D2Q96T17 732 aa20.1■□□□□ 0.81
CACNA1A-258ENST00000638029 ROCK2O75116 1388 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-258ENST00000638029 HSP90AB2PQ58FF8 381 aa20.09■□□□□ 0.81
CACNA1A-258ENST00000638029 C1orf141Q5JVX7 400 aa20.09■□□□□ 0.81
CACNA1A-258ENST00000638029 CSPP1Q1MSJ5 1256 aa20.07■□□□□ 0.8
CACNA1A-258ENST00000638029 CCDC27Q2M243 656 aa20.07■□□□□ 0.8
CACNA1A-258ENST00000638029 TPM1P09493 284 aa20.07■□□□□ 0.8
CACNA1A-258ENST00000638029 CLUAP1Q96AJ1 413 aa20.06■□□□□ 0.8
CACNA1A-258ENST00000638029 SMC4Q9NTJ3 1288 aa20.06■□□□□ 0.8
CACNA1A-258ENST00000638029 EPS15P42566 896 aa20.06■□□□□ 0.8
CACNA1A-258ENST00000638029 CCDC146Q8IYE0 955 aa20.06■□□□□ 0.8
CACNA1A-258ENST00000638029 TTLL5Q6EMB2 1281 aa20.05■□□□□ 0.8
CACNA1A-258ENST00000638029 CHMP4AQ9BY43 222 aa20.05■□□□□ 0.8
CACNA1A-258ENST00000638029 PLIN1O60240 522 aa20.05■□□□□ 0.8
CACNA1A-258ENST00000638029 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-258ENST00000638029 MYCNP04198 464 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-258ENST00000638029 RSPH6AQ9H0K4 717 aa20.04■□□□□ 0.8
CACNA1A-258ENST00000638029 RWDD1Q9H446 243 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-258ENST00000638029 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
CACNA1A-258ENST00000638029 SF3B2Q13435 895 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-258ENST00000638029 NFXL1Q6ZNB6 911 aa20.03■□□□□ 0.8
CACNA1A-258ENST00000638029 SPDYE4A6NLX3 237 aa20.02■□□□□ 0.8
CACNA1A-258ENST00000638029 ARHGAP35Q9NRY4 1499 aa20.02■□□□□ 0.8
CACNA1A-258ENST00000638029 BECN2A8MW95 431 aa20.02■□□□□ 0.8
CACNA1A-258ENST00000638029 TRIM29Q14134 588 aa20.01■□□□□ 0.79
CACNA1A-258ENST00000638029 PAXIP1Q6ZW49 1069 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-258ENST00000638029 CHMP4BP1P59074 171 aa20.01■□□□□ 0.79
CACNA1A-258ENST00000638029 HDAC5Q9UQL6 1122 aa20■□□□□ 0.79
CACNA1A-258ENST00000638029 PHF14O94880 888 aa19.99■□□□□ 0.79
CACNA1A-258ENST00000638029 PMFBP1Q8TBY8 1022 aa19.99■□□□□ 0.79
CACNA1A-258ENST00000638029 RUFY1Q96T51 708 aa19.99■□□□□ 0.79
CACNA1A-258ENST00000638029 HOMER1Q86YM7 354 aa19.99■□□□□ 0.79
CACNA1A-258ENST00000638029 PLCD3Q8N3E9 789 aa19.99■□□□□ 0.79
CACNA1A-258ENST00000638029 FOXD1Q16676 465 aa19.99■□□□□ 0.79
CACNA1A-258ENST00000638029 RCAN3Q9UKA8 241 aa19.99■□□□□ 0.79
CACNA1A-258ENST00000638029 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
CACNA1A-258ENST00000638029 EIF3AQ14152 1382 aaKnown RBP19.98■□□□□ 0.79
CACNA1A-258ENST00000638029 HMMRO75330 724 aa19.98■□□□□ 0.79
CACNA1A-258ENST00000638029 TTC5Q8N0Z6 440 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms