RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ANKRD18AQ8IVF6 992 aa23.68■■□□□ 1.38
CACNA1A-257ENST00000638009 USP8P40818 1118 aa23.68■■□□□ 1.38
CACNA1A-257ENST00000638009 ITPRIPQ8IWB1 547 aa23.67■■□□□ 1.38
CACNA1A-257ENST00000638009 AMOTL1Q8IY63 956 aa23.67■■□□□ 1.38
CACNA1A-257ENST00000638009 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
CACNA1A-257ENST00000638009 PCMTD1Q96MG8 357 aaPredicted RBP23.66■■□□□ 1.38
CACNA1A-257ENST00000638009 NAT10Q9H0A0 1025 aaKnown RBP23.66■■□□□ 1.38
CACNA1A-257ENST00000638009 RGL3Q3MIN7 710 aa23.65■■□□□ 1.38
CACNA1A-257ENST00000638009 HIRIP3Q9BW71 556 aaPredicted RBP23.65■■□□□ 1.38
CACNA1A-257ENST00000638009 EIF3AQ14152 1382 aaKnown RBP23.65■■□□□ 1.38
CACNA1A-257ENST00000638009 NEFHP12036 1026 aa23.65■■□□□ 1.38
CACNA1A-257ENST00000638009 LEKR1Q6ZMV7 388 aa23.64■■□□□ 1.38
CACNA1A-257ENST00000638009 ZNF592Q92610 1267 aa23.63■■□□□ 1.37
CACNA1A-257ENST00000638009 SYNE3Q6ZMZ3 975 aa23.63■■□□□ 1.37
CACNA1A-257ENST00000638009 FBXO3Q9UK99 471 aa23.63■■□□□ 1.37
CACNA1A-257ENST00000638009 DHX8Q14562 1220 aaKnown RBP23.63■■□□□ 1.37
CACNA1A-257ENST00000638009 CCP110O43303 1012 aa23.63■■□□□ 1.37
CACNA1A-257ENST00000638009 TAF3Q5VWG9 929 aa23.63■■□□□ 1.37
CACNA1A-257ENST00000638009 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
CACNA1A-257ENST00000638009 TRIM29Q14134 588 aa23.62■■□□□ 1.37
CACNA1A-257ENST00000638009 CC2D1BQ5T0F9 858 aaKnown RBP23.62■■□□□ 1.37
CACNA1A-257ENST00000638009 GOLGA3Q08378 1498 aa23.62■■□□□ 1.37
CACNA1A-257ENST00000638009 PLEKHD1A6NEE1 506 aa23.61■■□□□ 1.37
CACNA1A-257ENST00000638009 MNS1Q8NEH6 495 aa23.61■■□□□ 1.37
CACNA1A-257ENST00000638009 RCAN3Q9UKA8 241 aa23.61■■□□□ 1.37
CACNA1A-257ENST00000638009 RRP7BPQ9NSQ0 103 aa23.61■■□□□ 1.37
CACNA1A-257ENST00000638009 MORC1Q86VD1 984 aa23.6■■□□□ 1.37
CACNA1A-257ENST00000638009 EPS15P42566 896 aa23.6■■□□□ 1.37
CACNA1A-257ENST00000638009 GOLGA6L10A6NI86 522 aa23.59■■□□□ 1.37
CACNA1A-257ENST00000638009 ERLIN2O94905 339 aa23.59■■□□□ 1.37
CACNA1A-257ENST00000638009 DDX49Q9Y6V7 483 aaKnown RBP23.59■■□□□ 1.37
CACNA1A-257ENST00000638009 LMOD3Q0VAK6 560 aa23.58■■□□□ 1.37
CACNA1A-257ENST00000638009 GSE1Q14687 1217 aa23.58■■□□□ 1.37
CACNA1A-257ENST00000638009 CHMP3Q9Y3E7 222 aa23.58■■□□□ 1.37
CACNA1A-257ENST00000638009 EZRP15311 586 aaKnown RBP23.58■■□□□ 1.37
CACNA1A-257ENST00000638009 CCDC43Q96MW1 224 aaKnown RBP23.58■■□□□ 1.36
CACNA1A-257ENST00000638009 MFAP1P55081 439 aaKnown RBP23.58■■□□□ 1.36
CACNA1A-257ENST00000638009 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
CACNA1A-257ENST00000638009 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
CACNA1A-257ENST00000638009 KIAA0754O94854 1291 aa23.55■■□□□ 1.36
CACNA1A-257ENST00000638009 HSP90AB2PQ58FF8 381 aa23.55■■□□□ 1.36
CACNA1A-257ENST00000638009 APBB1O00213 710 aa23.54■■□□□ 1.36
CACNA1A-257ENST00000638009 FAM13BQ9NYF5 915 aa23.54■■□□□ 1.36
CACNA1A-257ENST00000638009 HDGFL2Q7Z4V5 671 aaPredicted RBP23.54■■□□□ 1.36
CACNA1A-257ENST00000638009 NAP1L1P55209 391 aaKnown RBP23.54■■□□□ 1.36
CACNA1A-257ENST00000638009 ABCC9O60706 1549 aa23.53■■□□□ 1.36
CACNA1A-257ENST00000638009 TIMELESSQ9UNS1 1208 aa23.53■■□□□ 1.36
CACNA1A-257ENST00000638009 RALBP1Q15311 655 aa23.53■■□□□ 1.36
CACNA1A-257ENST00000638009 TXLNBQ8N3L3 684 aa23.53■■□□□ 1.36
CACNA1A-257ENST00000638009 FAM43AQ8N2R8 423 aa23.53■■□□□ 1.36
CACNA1A-257ENST00000638009 R3HCC1Q9Y3T6 440 aaKnown RBP23.52■■□□□ 1.36
CACNA1A-257ENST00000638009 REC8O95072 547 aa23.52■■□□□ 1.36
CACNA1A-257ENST00000638009 NOL10Q9BSC4 688 aaKnown RBP23.52■■□□□ 1.36
CACNA1A-257ENST00000638009 FRAT2O75474 233 aaPredicted RBP23.51■■□□□ 1.35
CACNA1A-257ENST00000638009 SRPK2P78362 688 aaKnown RBP23.51■■□□□ 1.35
CACNA1A-257ENST00000638009 RUFY2Q8WXA3 655 aa23.51■■□□□ 1.35
CACNA1A-257ENST00000638009 TRIM34Q9BYJ4 488 aa23.51■■□□□ 1.35
CACNA1A-257ENST00000638009 CGNL1Q0VF96 1302 aa23.5■■□□□ 1.35
CACNA1A-257ENST00000638009 SEPT7Q16181 437 aaKnown RBP23.5■■□□□ 1.35
CACNA1A-257ENST00000638009 RABEP1Q15276 862 aa23.49■■□□□ 1.35
CACNA1A-257ENST00000638009 LUC7LQ9NQ29 371 aaKnown RBP23.49■■□□□ 1.35
CACNA1A-257ENST00000638009 CFDP1Q9UEE9 299 aaPredicted RBP23.48■■□□□ 1.35
CACNA1A-257ENST00000638009 SASS6Q6UVJ0 657 aa23.48■■□□□ 1.35
CACNA1A-257ENST00000638009 CTDP1Q9Y5B0 961 aaPredicted RBP23.48■■□□□ 1.35
CACNA1A-257ENST00000638009 HMGN5P82970 282 aaKnown RBP23.47■■□□□ 1.35
CACNA1A-257ENST00000638009 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
CACNA1A-257ENST00000638009 DEF6Q9H4E7 631 aa23.47■■□□□ 1.35
CACNA1A-257ENST00000638009 HSP90AB3PQ58FF7 597 aa23.47■■□□□ 1.35
CACNA1A-257ENST00000638009 TSPYL1Q9H0U9 437 aa23.46■■□□□ 1.35
CACNA1A-257ENST00000638009 FEZ1Q99689 392 aa23.46■■□□□ 1.35
CACNA1A-257ENST00000638009 TOMM22Q9NS69 142 aa23.46■■□□□ 1.35
CACNA1A-257ENST00000638009 OFD1O75665 1012 aa23.46■■□□□ 1.35
CACNA1A-257ENST00000638009 ZKSCAN1P17029 563 aaPredicted RBP23.45■■□□□ 1.34
CACNA1A-257ENST00000638009 SMC4Q9NTJ3 1288 aa23.45■■□□□ 1.34
CACNA1A-257ENST00000638009 IFT57Q9NWB7 429 aa23.45■■□□□ 1.34
CACNA1A-257ENST00000638009 MCTP1Q6DN14 999 aa23.45■■□□□ 1.34
CACNA1A-257ENST00000638009 RNF20Q5VTR2 975 aa23.44■■□□□ 1.34
CACNA1A-257ENST00000638009 MEX3CQ5U5Q3 659 aaKnown RBP23.44■■□□□ 1.34
CACNA1A-257ENST00000638009 ROCK1Q13464 1354 aa23.43■■□□□ 1.34
CACNA1A-257ENST00000638009 WWC1Q8IX03 1113 aa23.43■■□□□ 1.34
CACNA1A-257ENST00000638009 OLFM4Q6UX06 510 aa23.43■■□□□ 1.34
CACNA1A-257ENST00000638009 CLASRPQ8N2M8 674 aaKnown RBP23.43■■□□□ 1.34
CACNA1A-257ENST00000638009 KIF7Q2M1P5 1343 aa23.41■■□□□ 1.34
CACNA1A-257ENST00000638009 SMARCE1Q969G3 411 aa23.41■■□□□ 1.34
CACNA1A-257ENST00000638009 IQCEQ6IPM2 695 aa23.41■■□□□ 1.34
CACNA1A-257ENST00000638009 CAVIN1Q6NZI2 390 aaKnown RBP23.41■■□□□ 1.34
CACNA1A-257ENST00000638009 PLCD4Q9BRC7 762 aa23.41■■□□□ 1.34
CACNA1A-257ENST00000638009 CT47B1P0C2W7 299 aaPredicted RBP23.41■■□□□ 1.34
CACNA1A-257ENST00000638009 CCDC39Q9UFE4 941 aa23.41■■□□□ 1.34
CACNA1A-257ENST00000638009 SAFBQ15424 915 aaKnown RBP eCLIP23.41■■□□□ 1.34
CACNA1A-257ENST00000638009 LETM1O95202 739 aaPredicted RBP23.4■■□□□ 1.34
CACNA1A-257ENST00000638009 SEPT11Q9NVA2 429 aaKnown RBP23.4■■□□□ 1.34
CACNA1A-257ENST00000638009 GBP2P32456 591 aaPredicted RBP23.4■■□□□ 1.34
CACNA1A-257ENST00000638009 PDE3BQ13370 1112 aa23.4■■□□□ 1.34
CACNA1A-257ENST00000638009 EIF3JO75822 258 aaKnown RBP23.39■■□□□ 1.34
CACNA1A-257ENST00000638009 CHMP5Q9NZZ3 219 aa23.39■■□□□ 1.34
CACNA1A-257ENST00000638009 CPLX1O14810 134 aa23.39■■□□□ 1.33
CACNA1A-257ENST00000638009 TRDNQ13061 729 aa23.39■■□□□ 1.33
CACNA1A-257ENST00000638009 BRMS1Q9HCU9 246 aa23.38■■□□□ 1.33
CACNA1A-257ENST00000638009 CENPQQ7L2Z9 268 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms