RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
CACNA1A-254ENST00000637952 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
CACNA1A-254ENST00000637952 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
CACNA1A-254ENST00000637952 DIP2BQ9P265 1576 aa12.04□□□□□ -0.48
CACNA1A-254ENST00000637952 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-254ENST00000637952 SAMD9LQ8IVG5 1584 aa12.03□□□□□ -0.48
CACNA1A-254ENST00000637952 CFAP74Q9C0B2 1584 aa12.03□□□□□ -0.48
CACNA1A-254ENST00000637952 PREX2Q70Z35 1606 aa12.03□□□□□ -0.48
CACNA1A-254ENST00000637952 ARHGEF12Q9NZN5 1544 aa12.03□□□□□ -0.48
CACNA1A-254ENST00000637952 LRRIQ1Q96JM4 1722 aa12.03□□□□□ -0.48
CACNA1A-254ENST00000637952 ATP7AQ04656 1500 aa12.02□□□□□ -0.48
CACNA1A-254ENST00000637952 L3MBTL2Q969R5 705 aa12.02□□□□□ -0.48
CACNA1A-254ENST00000637952 KDM6BO15054 1643 aa12.02□□□□□ -0.49
CACNA1A-254ENST00000637952 STK26Q9P289 416 aa12.02□□□□□ -0.49
CACNA1A-254ENST00000637952 SLC52A1Q9NWF4 448 aa12.01□□□□□ -0.49
CACNA1A-254ENST00000637952 ABCC1P33527 1531 aa12.01□□□□□ -0.49
CACNA1A-254ENST00000637952 DUOX2Q9NRD8 1548 aa12.01□□□□□ -0.49
CACNA1A-254ENST00000637952 CARD11Q9BXL7 1154 aa12.01□□□□□ -0.49
CACNA1A-254ENST00000637952 CDC42BPAQ5VT25 1732 aa12.01□□□□□ -0.49
CACNA1A-254ENST00000637952 HIRIP3Q9BW71 556 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-254ENST00000637952 ZFYVE16Q7Z3T8 1539 aa12.01□□□□□ -0.49
CACNA1A-254ENST00000637952 THEMISQ8N1K5 641 aaPredicted RBP12□□□□□ -0.49
CACNA1A-254ENST00000637952 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
CACNA1A-254ENST00000637952 POGKQ9P215 609 aa12□□□□□ -0.49
CACNA1A-254ENST00000637952 GLI2P10070 1586 aa11.99□□□□□ -0.49
CACNA1A-254ENST00000637952 ARAP3Q8WWN8 1544 aa11.99□□□□□ -0.49
CACNA1A-254ENST00000637952 SHANK2Q9UPX8 1470 aa11.99□□□□□ -0.49
CACNA1A-254ENST00000637952 UBE2Q2Q8WVN8 375 aa11.99□□□□□ -0.49
CACNA1A-254ENST00000637952 DNMT1P26358 1616 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-254ENST00000637952 TXNDC2Q86VQ3 553 aa11.98□□□□□ -0.49
CACNA1A-254ENST00000637952 MLH3Q9UHC1 1453 aa11.98□□□□□ -0.49
CACNA1A-254ENST00000637952 ERBINQ96RT1 1412 aa11.98□□□□□ -0.49
CACNA1A-254ENST00000637952 SAFB2Q14151 953 aaKnown RBP eCLIP11.98□□□□□ -0.49
CACNA1A-254ENST00000637952 MAGI2Q86UL8 1455 aa11.97□□□□□ -0.49
CACNA1A-254ENST00000637952 IDI1Q13907 227 aa11.97□□□□□ -0.49
CACNA1A-254ENST00000637952 TIMELESSQ9UNS1 1208 aa11.96□□□□□ -0.49
CACNA1A-254ENST00000637952 CDC42BPBQ9Y5S2 1711 aa11.96□□□□□ -0.49
CACNA1A-254ENST00000637952 EIF4G2P78344 907 aaKnown RBP eCLIP11.96□□□□□ -0.49
CACNA1A-254ENST00000637952 ZMYM3Q14202 1370 aa11.96□□□□□ -0.49
CACNA1A-254ENST00000637952 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.5
CACNA1A-254ENST00000637952 COL17A1Q9UMD9 1497 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-254ENST00000637952 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.95□□□□□ -0.5
CACNA1A-254ENST00000637952 ANKLE2Q86XL3 938 aa11.93□□□□□ -0.5
CACNA1A-254ENST00000637952 ADGRL2O95490 1459 aa11.93□□□□□ -0.5
CACNA1A-254ENST00000637952 HECW2Q9P2P5 1572 aa11.92□□□□□ -0.5
CACNA1A-254ENST00000637952 TNRQ92752 1358 aa11.91□□□□□ -0.5
CACNA1A-254ENST00000637952 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.5
CACNA1A-254ENST00000637952 TRAK1Q9UPV9 953 aa11.9□□□□□ -0.5
CACNA1A-254ENST00000637952 HSPA2P54652 639 aa11.9□□□□□ -0.5
CACNA1A-254ENST00000637952 TMC1Q8TDI8 760 aa11.9□□□□□ -0.5
CACNA1A-254ENST00000637952 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
CACNA1A-254ENST00000637952 ROCK2O75116 1388 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-254ENST00000637952 CNTLNQ9NXG0 1405 aa11.88□□□□□ -0.51
CACNA1A-254ENST00000637952 MAP3K4Q9Y6R4 1608 aa11.88□□□□□ -0.51
CACNA1A-254ENST00000637952 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
CACNA1A-254ENST00000637952 CFAP70Q5T0N1 1121 aa11.87□□□□□ -0.51
CACNA1A-254ENST00000637952 ANKRD30BQ9BXX2 1392 aa11.86□□□□□ -0.51
CACNA1A-254ENST00000637952 FAM135AQ9P2D6 1515 aa11.86□□□□□ -0.51
CACNA1A-254ENST00000637952 SRPK2P78362 688 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-254ENST00000637952 STAC3Q96MF2 364 aa11.86□□□□□ -0.51
CACNA1A-254ENST00000637952 CFAP65Q6ZU64 1925 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-254ENST00000637952 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
CACNA1A-254ENST00000637952 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-254ENST00000637952 ANO8Q9HCE9 1232 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-254ENST00000637952 RPGRIP1LQ68CZ1 1315 aa11.84□□□□□ -0.51
CACNA1A-254ENST00000637952 DDX10Q13206 875 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-254ENST00000637952 CDCA8Q53HL2 280 aa11.83□□□□□ -0.52
CACNA1A-254ENST00000637952 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
CACNA1A-254ENST00000637952 ADGBQ8N7X0 1667 aa11.81□□□□□ -0.52
CACNA1A-254ENST00000637952 HSPA5P11021 654 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-254ENST00000637952 TMF1P82094 1093 aa11.81□□□□□ -0.52
CACNA1A-254ENST00000637952 PROSER2Q86WR7 435 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-254ENST00000637952 NPATQ14207 1427 aa11.8□□□□□ -0.52
CACNA1A-254ENST00000637952 NBPF1Q3BBV0 1214 aa11.8□□□□□ -0.52
CACNA1A-254ENST00000637952 PZPP20742 1482 aa11.79□□□□□ -0.52
CACNA1A-254ENST00000637952 KIF13AQ9H1H9 1805 aa11.79□□□□□ -0.52
CACNA1A-254ENST00000637952 ADGRF5Q8IZF2 1346 aa11.79□□□□□ -0.52
CACNA1A-254ENST00000637952 MINK1Q8N4C8 1332 aaPredicted RBP11.79□□□□□ -0.52
CACNA1A-254ENST00000637952 ST20-MTHFSA0A0A6YYL1 179 aa11.79□□□□□ -0.52
CACNA1A-254ENST00000637952 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
CACNA1A-254ENST00000637952 UHRF1BP1Q6BDS2 1440 aa11.79□□□□□ -0.52
CACNA1A-254ENST00000637952 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
CACNA1A-254ENST00000637952 MAST1Q9Y2H9 1570 aa11.79□□□□□ -0.52
CACNA1A-254ENST00000637952 NCKAP5LQ9HCH0 1330 aa11.78□□□□□ -0.52
CACNA1A-254ENST00000637952 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
CACNA1A-254ENST00000637952 KDM5CP41229 1560 aa11.78□□□□□ -0.52
CACNA1A-254ENST00000637952 NBPF8Q3BBV2 869 aa11.77□□□□□ -0.52
CACNA1A-254ENST00000637952 PLXNC1O60486 1568 aa11.77□□□□□ -0.53
CACNA1A-254ENST00000637952 KIDINS220Q9ULH0 1771 aa11.77□□□□□ -0.53
CACNA1A-254ENST00000637952 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-254ENST00000637952 ANP32CO43423 234 aa11.76□□□□□ -0.53
CACNA1A-254ENST00000637952 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-254ENST00000637952 NOS1P29475 1434 aa11.76□□□□□ -0.53
CACNA1A-254ENST00000637952 KDM5DQ9BY66 1539 aa11.75□□□□□ -0.53
CACNA1A-254ENST00000637952 ABCA6Q8N139 1617 aa11.75□□□□□ -0.53
CACNA1A-254ENST00000637952 RBM33Q96EV2 1170 aaKnown RBP11.75□□□□□ -0.53
CACNA1A-254ENST00000637952 ANP32EQ9BTT0 268 aa11.75□□□□□ -0.53
CACNA1A-254ENST00000637952 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
CACNA1A-254ENST00000637952 ARHGEF40Q8TER5 1519 aa11.75□□□□□ -0.53
CACNA1A-254ENST00000637952 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms