RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 CARD11Q9BXL7 1154 aa21.4■■□□□ 1.02
SCN8A-214ENST00000637709 ADGRL1O94910 1474 aa21.39■■□□□ 1.02
SCN8A-214ENST00000637709 ABCA9Q8IUA7 1624 aa21.39■■□□□ 1.01
SCN8A-214ENST00000637709 ZFYVE16Q7Z3T8 1539 aa21.38■■□□□ 1.01
SCN8A-214ENST00000637709 CCDC184Q52MB2 194 aa21.38■■□□□ 1.01
SCN8A-214ENST00000637709 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
SCN8A-214ENST00000637709 IQGAP3Q86VI3 1631 aa21.36■■□□□ 1.01
SCN8A-214ENST00000637709 KIF3BO15066 747 aa21.35■■□□□ 1.01
SCN8A-214ENST00000637709 CYB5RLQ6IPT4 315 aa21.35■■□□□ 1.01
SCN8A-214ENST00000637709 ERBINQ96RT1 1412 aa21.35■■□□□ 1.01
SCN8A-214ENST00000637709 NBPF1Q3BBV0 1214 aa21.35■■□□□ 1.01
SCN8A-214ENST00000637709 CNTLNQ9NXG0 1405 aa21.34■■□□□ 1.01
SCN8A-214ENST00000637709 ST20-MTHFSA0A0A6YYL1 179 aa21.33■■□□□ 1
SCN8A-214ENST00000637709 KDM5CP41229 1560 aa21.32■■□□□ 1
SCN8A-214ENST00000637709 ATP7AQ04656 1500 aa21.32■■□□□ 1
SCN8A-214ENST00000637709 CCER2I3L3R5 266 aa21.32■■□□□ 1
SCN8A-214ENST00000637709 ROCK2O75116 1388 aaKnown RBP21.31■■□□□ 1
SCN8A-214ENST00000637709 E9PCH4 1651 aa21.28■■□□□ 1
SCN8A-214ENST00000637709 A2MP01023 1474 aa21.28■■□□□ 1
SCN8A-214ENST00000637709 UHRF1BP1Q6BDS2 1440 aa21.28■■□□□ 1
SCN8A-214ENST00000637709 CD109Q6YHK3 1445 aa21.28■■□□□ 1
SCN8A-214ENST00000637709 RALGAPBQ86X10 1494 aa21.28■■□□□ 1
SCN8A-214ENST00000637709 ARAP3Q8WWN8 1544 aa21.28■■□□□ 1
SCN8A-214ENST00000637709 MAGI2Q86UL8 1455 aa21.27■■□□□ 1
SCN8A-214ENST00000637709 INO80Q9ULG1 1556 aaPredicted RBP21.26■□□□□ 0.99
SCN8A-214ENST00000637709 CFAP65Q6ZU64 1925 aaKnown RBP21.26■□□□□ 0.99
SCN8A-214ENST00000637709 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
SCN8A-214ENST00000637709 POLR1AO95602 1720 aaPredicted RBP21.25■□□□□ 0.99
SCN8A-214ENST00000637709 SENP3-EIF4A1A0A087X0R7 540 aa21.25■□□□□ 0.99
SCN8A-214ENST00000637709 PRKRIP1Q9H875 184 aaPredicted RBP21.25■□□□□ 0.99
SCN8A-214ENST00000637709 RTEL1-TNFRSF6BF6WH68 1400 aa21.24■□□□□ 0.99
SCN8A-214ENST00000637709 PRAG1Q86YV5 1406 aa21.24■□□□□ 0.99
SCN8A-214ENST00000637709 KIDINS220Q9ULH0 1771 aa21.23■□□□□ 0.99
SCN8A-214ENST00000637709 FAM9BQ8IZU0 186 aa21.22■□□□□ 0.99
SCN8A-214ENST00000637709 HNRNPUQ00839 825 aaKnown RBP eCLIP21.21■□□□□ 0.99
SCN8A-214ENST00000637709 TRPM1Q7Z4N2 1603 aa21.2■□□□□ 0.98
SCN8A-214ENST00000637709 UGGT1Q9NYU2 1555 aa21.2■□□□□ 0.98
SCN8A-214ENST00000637709 GGT6Q6P531 493 aa21.2■□□□□ 0.98
SCN8A-214ENST00000637709 ATP10AO60312 1499 aa21.19■□□□□ 0.98
SCN8A-214ENST00000637709 MRS2Q9HD23 443 aa21.18■□□□□ 0.98
SCN8A-214ENST00000637709 DHX29Q7Z478 1369 aaKnown RBP21.17■□□□□ 0.98
SCN8A-214ENST00000637709 DEPDC5O75140 1603 aa21.16■□□□□ 0.98
SCN8A-214ENST00000637709 BCANQ96GW7 911 aa21.15■□□□□ 0.98
SCN8A-214ENST00000637709 SUPT16HQ9Y5B9 1047 aaKnown RBP21.15■□□□□ 0.98
SCN8A-214ENST00000637709 ZNF518AQ6AHZ1 1483 aa21.15■□□□□ 0.98
SCN8A-214ENST00000637709 CLTCL1P53675 1640 aa21.15■□□□□ 0.98
SCN8A-214ENST00000637709 SPHKAPQ2M3C7 1700 aa21.15■□□□□ 0.98
SCN8A-214ENST00000637709 KANK1Q14678 1352 aa21.14■□□□□ 0.98
SCN8A-214ENST00000637709 MROH1Q8NDA8 1641 aa21.14■□□□□ 0.97
SCN8A-214ENST00000637709 SENP3Q9H4L4 574 aaPredicted RBP21.14■□□□□ 0.97
SCN8A-214ENST00000637709 CEP152O94986 1710 aa21.12■□□□□ 0.97
SCN8A-214ENST00000637709 POGZQ7Z3K3 1410 aa21.12■□□□□ 0.97
SCN8A-214ENST00000637709 TET3O43151 1660 aa21.11■□□□□ 0.97
SCN8A-214ENST00000637709 CHGAP10645 457 aaKnown RBP21.11■□□□□ 0.97
SCN8A-214ENST00000637709 TRPM2O94759 1503 aa21.09■□□□□ 0.97
SCN8A-214ENST00000637709 RIMBP3CA6NJZ7 1639 aa21.08■□□□□ 0.97
SCN8A-214ENST00000637709 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.97
SCN8A-214ENST00000637709 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.97
SCN8A-214ENST00000637709 DISP3Q9P2K9 1392 aa21.08■□□□□ 0.96
SCN8A-214ENST00000637709 TSPOAP1O95153 1857 aa21.07■□□□□ 0.96
SCN8A-214ENST00000637709 PRDM15P57071 1507 aaPredicted RBP21.07■□□□□ 0.96
SCN8A-214ENST00000637709 PPRC1Q5VV67 1664 aaKnown RBP21.07■□□□□ 0.96
SCN8A-214ENST00000637709 FRMPD1Q5SYB0 1578 aa21.06■□□□□ 0.96
SCN8A-214ENST00000637709 ABCA6Q8N139 1617 aa21.06■□□□□ 0.96
SCN8A-214ENST00000637709 VWDEQ8N2E2 1590 aa21.06■□□□□ 0.96
SCN8A-214ENST00000637709 FKBP8Q14318 412 aa21.05■□□□□ 0.96
SCN8A-214ENST00000637709 FAM69CQ0P6D2 419 aa21.05■□□□□ 0.96
SCN8A-214ENST00000637709 HECW2Q9P2P5 1572 aa21.04■□□□□ 0.96
SCN8A-214ENST00000637709 PTPRTO14522 1441 aa21.04■□□□□ 0.96
SCN8A-214ENST00000637709 NUTM2DQ5VT03 806 aaPredicted RBP21.03■□□□□ 0.96
SCN8A-214ENST00000637709 TESK2Q96S53 571 aa21.03■□□□□ 0.96
SCN8A-214ENST00000637709 EIF2AK4Q9P2K8 1649 aaKnown RBP21.03■□□□□ 0.96
SCN8A-214ENST00000637709 MADDQ8WXG6 1647 aa21.02■□□□□ 0.96
SCN8A-214ENST00000637709 CFAP74Q9C0B2 1584 aa21.02■□□□□ 0.96
SCN8A-214ENST00000637709 WASHC2CQ9Y4E1 1318 aa21.02■□□□□ 0.96
SCN8A-214ENST00000637709 GPRASP1Q5JY77 1395 aa21■□□□□ 0.95
SCN8A-214ENST00000637709 ADGRF5Q8IZF2 1346 aa21■□□□□ 0.95
SCN8A-214ENST00000637709 CFAP70Q5T0N1 1121 aa21■□□□□ 0.95
SCN8A-214ENST00000637709 EFCAB6Q5THR3 1501 aa21■□□□□ 0.95
SCN8A-214ENST00000637709 YEATS2Q9ULM3 1422 aa21■□□□□ 0.95
SCN8A-214ENST00000637709 IRX6P78412 446 aaPredicted RBP21■□□□□ 0.95
SCN8A-214ENST00000637709 MROH2AA6NES4 1674 aa20.99■□□□□ 0.95
SCN8A-214ENST00000637709 MLH3Q9UHC1 1453 aa20.98■□□□□ 0.95
SCN8A-214ENST00000637709 CC2D1BQ5T0F9 858 aaKnown RBP20.98■□□□□ 0.95
SCN8A-214ENST00000637709 ARID4BQ4LE39 1312 aaPredicted RBP20.97■□□□□ 0.95
SCN8A-214ENST00000637709 NPATQ14207 1427 aa20.97■□□□□ 0.95
SCN8A-214ENST00000637709 RNF17Q9BXT8 1623 aaKnown RBP20.96■□□□□ 0.95
SCN8A-214ENST00000637709 MAP3K4Q9Y6R4 1608 aa20.95■□□□□ 0.94
SCN8A-214ENST00000637709 KIF1BO60333 1816 aa20.95■□□□□ 0.94
SCN8A-214ENST00000637709 PANK3Q9H999 370 aa20.94■□□□□ 0.94
SCN8A-214ENST00000637709 RICTORQ6R327 1708 aa20.94■□□□□ 0.94
SCN8A-214ENST00000637709 NEO1Q92859 1461 aa20.93■□□□□ 0.94
SCN8A-214ENST00000637709 COL17A1Q9UMD9 1497 aaPredicted RBP20.93■□□□□ 0.94
SCN8A-214ENST00000637709 DIP2CQ9Y2E4 1556 aa20.93■□□□□ 0.94
SCN8A-214ENST00000637709 TMC1Q8TDI8 760 aa20.93■□□□□ 0.94
SCN8A-214ENST00000637709 TMF1P82094 1093 aa20.92■□□□□ 0.94
SCN8A-214ENST00000637709 SIGLEC1Q9BZZ2 1709 aa20.9■□□□□ 0.94
SCN8A-214ENST00000637709 NOS1P29475 1434 aa20.9■□□□□ 0.94
SCN8A-214ENST00000637709 LAMC1P11047 1609 aa20.9■□□□□ 0.94
SCN8A-214ENST00000637709 ABCC3O15438 1527 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms