RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 NCOA1Q15788 1441 aa2.63□□□□□ -1.99
SYNGAP1-216ENST00000636640 UHRF1BP1Q6BDS2 1440 aa2.63□□□□□ -1.99
SYNGAP1-216ENST00000636640 FBXO31Q5XUX0 539 aaPredicted RBP2.63□□□□□ -1.99
SYNGAP1-216ENST00000636640 CDK11AQ9UQ88 783 aaPredicted RBP2.63□□□□□ -1.99
SYNGAP1-216ENST00000636640 RGPD8O14715 1765 aaPredicted RBP2.63□□□□□ -1.99
SYNGAP1-216ENST00000636640 LRRC9Q6ZRR7 1453 aa2.63□□□□□ -1.99
SYNGAP1-216ENST00000636640 SPAG9O60271 1321 aaKnown RBP2.63□□□□□ -1.99
SYNGAP1-216ENST00000636640 ZMYM3Q14202 1370 aa2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 MTUS2Q5JR59 1369 aa2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 CCNB3Q8WWL7 1395 aa2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 SETD1AO15047 1707 aaKnown RBP2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 PTPRTO14522 1441 aa2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 KIAA1107Q9UPP5 1409 aa2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 GGT6Q6P531 493 aa2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 CFDP1Q9UEE9 299 aaPredicted RBP2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 TCOF1Q13428 1488 aaKnown RBP2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 CCDC141Q6ZP82 1450 aa2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 ZNF335Q9H4Z2 1342 aaPredicted RBP2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 ABCC3O15438 1527 aa2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 KDM5DQ9BY66 1539 aa2.62□□□□□ -1.99
SYNGAP1-216ENST00000636640 KIF1BO60333 1816 aa2.61□□□□□ -1.99
SYNGAP1-216ENST00000636640 NPATQ14207 1427 aa2.61□□□□□ -1.99
SYNGAP1-216ENST00000636640 VPS8Q8N3P4 1428 aa2.61□□□□□ -1.99
SYNGAP1-216ENST00000636640 A2ML1A8K2U0 1454 aa2.61□□□□□ -1.99
SYNGAP1-216ENST00000636640 PLEKHH2Q8IVE3 1493 aa2.61□□□□□ -1.99
SYNGAP1-216ENST00000636640 KIF3BO15066 747 aa2.61□□□□□ -1.99
SYNGAP1-216ENST00000636640 SPHKAPQ2M3C7 1700 aa2.61□□□□□ -1.99
SYNGAP1-216ENST00000636640 UGGT1Q9NYU2 1555 aa2.61□□□□□ -1.99
SYNGAP1-216ENST00000636640 DHX29Q7Z478 1369 aaKnown RBP2.61□□□□□ -1.99
SYNGAP1-216ENST00000636640 TMEM131LA2VDJ0 1609 aa2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 RTEL1-TNFRSF6BF6WH68 1400 aa2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 CNTLNQ9NXG0 1405 aa2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 TET3O43151 1660 aa2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 KDM5AP29375 1690 aaKnown RBP2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 ROBO1Q9Y6N7 1651 aa2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 PZPP20742 1482 aa2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 NALCNQ8IZF0 1738 aa2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 PRDM15P57071 1507 aaPredicted RBP2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 MAP3K1Q13233 1512 aa2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 SENP3Q9H4L4 574 aaPredicted RBP2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 UNC13BO14795 1591 aa2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 MED1Q15648 1581 aaPredicted RBP2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 NRXN3Q9Y4C0 1643 aa2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.6□□□□□ -1.99
SYNGAP1-216ENST00000636640 ABCC5O15440 1437 aa2.59□□□□□ -1.99
SYNGAP1-216ENST00000636640 MYOM3Q5VTT5 1437 aa2.59□□□□□ -1.99
SYNGAP1-216ENST00000636640 PHLPP1O60346 1717 aa2.59□□□□□ -1.99
SYNGAP1-216ENST00000636640 IFT172Q9UG01 1749 aa2.59□□□□□ -1.99
SYNGAP1-216ENST00000636640 ERVK-7P63135 1459 aa2.59□□□□□ -1.99
SYNGAP1-216ENST00000636640 PLA2R1Q13018 1463 aa2.59□□□□□ -1.99
SYNGAP1-216ENST00000636640 PPLO60437 1756 aa2.59□□□□□ -1.99
SYNGAP1-216ENST00000636640 DUOX2Q9NRD8 1548 aa2.59□□□□□ -1.99
SYNGAP1-216ENST00000636640 PPARGC1BQ86YN6 1023 aaKnown RBP2.59□□□□□ -1.99
SYNGAP1-216ENST00000636640 IQGAP3Q86VI3 1631 aa2.59□□□□□ -1.99
SYNGAP1-216ENST00000636640 TNRQ92752 1358 aa2.59□□□□□ -2
SYNGAP1-216ENST00000636640 MARF1Q9Y4F3 1742 aaKnown RBP2.59□□□□□ -2
SYNGAP1-216ENST00000636640 DAPK1P53355 1430 aa2.59□□□□□ -2
SYNGAP1-216ENST00000636640 MIA2Q96PC5 1412 aa2.59□□□□□ -2
SYNGAP1-216ENST00000636640 MED14O60244 1454 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 IQSEC2Q5JU85 1478 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 SHANK2Q9UPX8 1470 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 EFCAB6Q5THR3 1501 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 LRRC7Q96NW7 1537 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 LTKP29376 864 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 RBM33Q96EV2 1170 aaKnown RBP2.58□□□□□ -2
SYNGAP1-216ENST00000636640 ESF1Q9H501 851 aaKnown RBP2.58□□□□□ -2
SYNGAP1-216ENST00000636640 CHIC2Q9UKJ5 165 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 BRWD3Q6RI45 1802 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 DISP3Q9P2K9 1392 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 NPHP4O75161 1426 aaPredicted RBP2.58□□□□□ -2
SYNGAP1-216ENST00000636640 FGD6Q6ZV73 1430 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 ARHGAP23Q9P227 1491 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 ADGRB3O60242 1522 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 SLIT1O75093 1534 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 FAM135AQ9P2D6 1515 aa2.58□□□□□ -2
SYNGAP1-216ENST00000636640 NWD1Q149M9 1564 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 CLTCL1P53675 1640 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 UBAP1LF5GYI3 381 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 HSPA1LP34931 641 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.57□□□□□ -2
SYNGAP1-216ENST00000636640 RRP7BPQ9NSQ0 103 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 PPP6R1Q9UPN7 881 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 WASHC2CQ9Y4E1 1318 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 KIF15Q9NS87 1388 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 NLRP1Q9C000 1473 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 CPS1P31327 1500 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 COL16A1Q07092 1604 aaPredicted RBP2.57□□□□□ -2
SYNGAP1-216ENST00000636640 NHSL1Q5SYE7 1610 aa2.57□□□□□ -2
SYNGAP1-216ENST00000636640 XRN1Q8IZH2 1706 aaKnown RBP2.56□□□□□ -2
SYNGAP1-216ENST00000636640 PIP4K2BP78356 416 aa2.56□□□□□ -2
SYNGAP1-216ENST00000636640 PKD2Q13563 968 aa2.56□□□□□ -2
SYNGAP1-216ENST00000636640 DMRT2Q9Y5R5 561 aa2.56□□□□□ -2
SYNGAP1-216ENST00000636640 NOS1P29475 1434 aa2.56□□□□□ -2
SYNGAP1-216ENST00000636640 ADGRL2O95490 1459 aa2.56□□□□□ -2
SYNGAP1-216ENST00000636640 SCAF11Q99590 1463 aaKnown RBP2.56□□□□□ -2
SYNGAP1-216ENST00000636640 LMTK2Q8IWU2 1503 aa2.56□□□□□ -2
SYNGAP1-216ENST00000636640 SHPRHQ149N8 1683 aa2.56□□□□□ -2
SYNGAP1-216ENST00000636640 ZFYVE9O95405 1425 aa2.55□□□□□ -2
SYNGAP1-216ENST00000636640 TSPY4P0CV99 314 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms