RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 VPS37DQ86XT2 251 aa22.27■■□□□ 1.16
CACNA1A-227ENST00000636549 GOLGA6L1Q8N7Z2 621 aa22.27■■□□□ 1.16
CACNA1A-227ENST00000636549 MCTP1Q6DN14 999 aa22.27■■□□□ 1.15
CACNA1A-227ENST00000636549 APPP05067 770 aa22.26■■□□□ 1.15
CACNA1A-227ENST00000636549 H3BQV1 296 aa22.24■■□□□ 1.15
CACNA1A-227ENST00000636549 IFFO2Q5TF58 517 aa22.24■■□□□ 1.15
CACNA1A-227ENST00000636549 VSIG10Q8N0Z9 540 aa22.23■■□□□ 1.15
CACNA1A-227ENST00000636549 NOL10Q9BSC4 688 aaKnown RBP22.22■■□□□ 1.15
CACNA1A-227ENST00000636549 AKAP17AQ02040 695 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-227ENST00000636549 TCERG1O14776 1098 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-227ENST00000636549 IPO8O15397 1037 aaKnown RBP22.2■■□□□ 1.15
CACNA1A-227ENST00000636549 TPM3P06753 285 aa22.2■■□□□ 1.15
CACNA1A-227ENST00000636549 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
CACNA1A-227ENST00000636549 BCL2L13Q9BXK5 485 aa22.2■■□□□ 1.14
CACNA1A-227ENST00000636549 PLIN1O60240 522 aa22.2■■□□□ 1.14
CACNA1A-227ENST00000636549 C1orf141Q5JVX7 400 aa22.19■■□□□ 1.14
CACNA1A-227ENST00000636549 NUTM2GQ5VZR2 741 aa22.18■■□□□ 1.14
CACNA1A-227ENST00000636549 ROCK2O75116 1388 aaKnown RBP22.18■■□□□ 1.14
CACNA1A-227ENST00000636549 TRAK1Q9UPV9 953 aa22.17■■□□□ 1.14
CACNA1A-227ENST00000636549 HTATSF1O43719 755 aaKnown RBP22.17■■□□□ 1.14
CACNA1A-227ENST00000636549 PKD2Q13563 968 aa22.17■■□□□ 1.14
CACNA1A-227ENST00000636549 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
CACNA1A-227ENST00000636549 CCDC43Q96MW1 224 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-227ENST00000636549 DEKP35659 375 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-227ENST00000636549 TMEM132AQ24JP5 1023 aa22.15■■□□□ 1.14
CACNA1A-227ENST00000636549 PAF1Q8N7H5 531 aa22.15■■□□□ 1.14
CACNA1A-227ENST00000636549 KIF3BO15066 747 aa22.15■■□□□ 1.14
CACNA1A-227ENST00000636549 SKIDA1Q1XH10 827 aa22.14■■□□□ 1.14
CACNA1A-227ENST00000636549 STK11IPQ8N1F8 1099 aa22.14■■□□□ 1.14
CACNA1A-227ENST00000636549 CCDC27Q2M243 656 aa22.14■■□□□ 1.13
CACNA1A-227ENST00000636549 FAM184AQ8NB25 1140 aa22.14■■□□□ 1.13
CACNA1A-227ENST00000636549 ZNF592Q92610 1267 aa22.14■■□□□ 1.13
CACNA1A-227ENST00000636549 KIF16BQ96L93 1317 aa22.13■■□□□ 1.13
CACNA1A-227ENST00000636549 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
CACNA1A-227ENST00000636549 HSPA5P11021 654 aaKnown RBP22.13■■□□□ 1.13
CACNA1A-227ENST00000636549 GBP4Q96PP9 640 aa22.13■■□□□ 1.13
CACNA1A-227ENST00000636549 BAZ1BQ9UIG0 1483 aaKnown RBP22.12■■□□□ 1.13
CACNA1A-227ENST00000636549 AMOTL1Q8IY63 956 aa22.12■■□□□ 1.13
CACNA1A-227ENST00000636549 ZFYVE27Q5T4F4 411 aa22.12■■□□□ 1.13
CACNA1A-227ENST00000636549 IKQ13123 557 aaPredicted RBP22.11■■□□□ 1.13
CACNA1A-227ENST00000636549 HNRNPMP52272 730 aaKnown RBP eCLIP22.11■■□□□ 1.13
CACNA1A-227ENST00000636549 CCAR1Q8IX12 1150 aaKnown RBP22.1■■□□□ 1.13
CACNA1A-227ENST00000636549 RBM33Q96EV2 1170 aaKnown RBP22.09■■□□□ 1.13
CACNA1A-227ENST00000636549 NUTM2BA6NNL0 878 aaPredicted RBP22.09■■□□□ 1.13
CACNA1A-227ENST00000636549 NUTM2EB1AL46 878 aaPredicted RBP22.09■■□□□ 1.13
CACNA1A-227ENST00000636549 NUTM2AQ8IVF1 878 aaPredicted RBP22.09■■□□□ 1.13
CACNA1A-227ENST00000636549 TTC5Q8N0Z6 440 aa22.09■■□□□ 1.13
CACNA1A-227ENST00000636549 TSR1Q2NL82 804 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-227ENST00000636549 CHMP4CQ96CF2 233 aa22.07■■□□□ 1.12
CACNA1A-227ENST00000636549 RWDD1Q9H446 243 aaPredicted RBP22.07■■□□□ 1.12
CACNA1A-227ENST00000636549 KTN1Q86UP2 1357 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-227ENST00000636549 WASHC2CQ9Y4E1 1318 aa22.07■■□□□ 1.12
CACNA1A-227ENST00000636549 NFXL1Q6ZNB6 911 aa22.07■■□□□ 1.12
CACNA1A-227ENST00000636549 NAP1L1P55209 391 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-227ENST00000636549 WDR70Q9NW82 654 aa22.06■■□□□ 1.12
CACNA1A-227ENST00000636549 CCDC34Q96HJ3 373 aa22.06■■□□□ 1.12
CACNA1A-227ENST00000636549 AIMP1Q12904 312 aaKnown RBP22.06■■□□□ 1.12
CACNA1A-227ENST00000636549 SYNE3Q6ZMZ3 975 aa22.05■■□□□ 1.12
CACNA1A-227ENST00000636549 DHX37Q8IY37 1157 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-227ENST00000636549 TPM2P07951 284 aa22.04■■□□□ 1.12
CACNA1A-227ENST00000636549 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
CACNA1A-227ENST00000636549 PPM1FP49593 454 aaPredicted RBP22.03■■□□□ 1.12
CACNA1A-227ENST00000636549 SYAP1Q96A49 352 aaPredicted RBP22.03■■□□□ 1.12
CACNA1A-227ENST00000636549 CALD1Q05682 793 aaKnown RBP22.03■■□□□ 1.12
CACNA1A-227ENST00000636549 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
CACNA1A-227ENST00000636549 DCAF1Q9Y4B6 1507 aa22.02■■□□□ 1.12
CACNA1A-227ENST00000636549 PSME1Q06323 249 aa22.02■■□□□ 1.12
CACNA1A-227ENST00000636549 ANKRD45Q5TZF3 282 aa22.02■■□□□ 1.12
CACNA1A-227ENST00000636549 PIP4K2BP78356 416 aa22.02■■□□□ 1.12
CACNA1A-227ENST00000636549 RCAN3Q9UKA8 241 aa22.01■■□□□ 1.11
CACNA1A-227ENST00000636549 PTMSP20962 102 aa22.01■■□□□ 1.11
CACNA1A-227ENST00000636549 ANO2Q9NQ90 1003 aa22■■□□□ 1.11
CACNA1A-227ENST00000636549 HMMRO75330 724 aa22■■□□□ 1.11
CACNA1A-227ENST00000636549 C9orf78Q9NZ63 289 aaPredicted RBP22■■□□□ 1.11
CACNA1A-227ENST00000636549 CHMP4BP1P59074 171 aa21.99■■□□□ 1.11
CACNA1A-227ENST00000636549 CT47A1Q5JQC4 288 aaPredicted RBP21.99■■□□□ 1.11
CACNA1A-227ENST00000636549 WRNQ14191 1432 aaPredicted RBP eCLIP21.99■■□□□ 1.11
CACNA1A-227ENST00000636549 ODF2Q5BJF6 829 aa21.98■■□□□ 1.11
CACNA1A-227ENST00000636549 TTLL5Q6EMB2 1281 aa21.98■■□□□ 1.11
CACNA1A-227ENST00000636549 MINK1Q8N4C8 1332 aaPredicted RBP21.97■■□□□ 1.11
CACNA1A-227ENST00000636549 ATP2B2Q01814 1243 aa21.97■■□□□ 1.11
CACNA1A-227ENST00000636549 TEFQ10587 303 aa21.96■■□□□ 1.11
CACNA1A-227ENST00000636549 TRIM29Q14134 588 aa21.96■■□□□ 1.11
CACNA1A-227ENST00000636549 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
CACNA1A-227ENST00000636549 MYCNP04198 464 aaPredicted RBP21.96■■□□□ 1.11
CACNA1A-227ENST00000636549 TERF2IPQ9NYB0 399 aa21.95■■□□□ 1.1
CACNA1A-227ENST00000636549 R3HCC1Q9Y3T6 440 aaKnown RBP21.94■■□□□ 1.1
CACNA1A-227ENST00000636549 GOLGA6L19H0YKK7 550 aa21.93■■□□□ 1.1
CACNA1A-227ENST00000636549 NEUROD6Q96NK8 337 aa21.93■■□□□ 1.1
CACNA1A-227ENST00000636549 GOLGA6L3A6NEY3 463 aa21.92■■□□□ 1.1
CACNA1A-227ENST00000636549 STRN4Q9NRL3 753 aa21.92■■□□□ 1.1
CACNA1A-227ENST00000636549 CSPP1Q1MSJ5 1256 aa21.91■■□□□ 1.1
CACNA1A-227ENST00000636549 HSP90AB2PQ58FF8 381 aa21.91■■□□□ 1.1
CACNA1A-227ENST00000636549 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
CACNA1A-227ENST00000636549 PAXIP1Q6ZW49 1069 aaPredicted RBP21.9■■□□□ 1.1
CACNA1A-227ENST00000636549 PMFBP1Q8TBY8 1022 aa21.9■■□□□ 1.1
CACNA1A-227ENST00000636549 BECN2A8MW95 431 aa21.9■■□□□ 1.1
CACNA1A-227ENST00000636549 CCDC180Q9P1Z9 1646 aa21.9■■□□□ 1.1
CACNA1A-227ENST00000636549 DIAPH3Q9NSV4 1193 aa21.89■■□□□ 1.1
CACNA1A-227ENST00000636549 SF3B2Q13435 895 aaKnown RBP21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms