RNA–Protein interactions for RNA: ENST00000635914.1

UBE3A-224, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 9,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-224ENST00000635914 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
UBE3A-224ENST00000635914 SOX12O15370 315 aa17.07■□□□□ 0.32
UBE3A-224ENST00000635914 EID1Q9Y6B2 187 aa17.06■□□□□ 0.32
UBE3A-224ENST00000635914 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
UBE3A-224ENST00000635914 TEX35Q5T0J7 233 aa17.05■□□□□ 0.32
UBE3A-224ENST00000635914 CCDC9Q9Y3X0 531 aaKnown RBP17.05■□□□□ 0.32
UBE3A-224ENST00000635914 SYNE3Q6ZMZ3 975 aa17.04■□□□□ 0.32
UBE3A-224ENST00000635914 CCDC43Q96MW1 224 aaKnown RBP17.04■□□□□ 0.32
UBE3A-224ENST00000635914 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
UBE3A-224ENST00000635914 CCER2I3L3R5 266 aa17.03■□□□□ 0.32
UBE3A-224ENST00000635914 MYO6Q9UM54 1294 aa17.03■□□□□ 0.32
UBE3A-224ENST00000635914 WASHC2AQ641Q2 1341 aa17.03■□□□□ 0.32
UBE3A-224ENST00000635914 APBB1O00213 710 aa17.03■□□□□ 0.32
UBE3A-224ENST00000635914 CPLX2Q6PUV4 134 aaKnown RBP17.02■□□□□ 0.31
UBE3A-224ENST00000635914 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
UBE3A-224ENST00000635914 AK7Q96M32 723 aa17.01■□□□□ 0.31
UBE3A-224ENST00000635914 ROCK1Q13464 1354 aa17.01■□□□□ 0.31
UBE3A-224ENST00000635914 NOM1Q5C9Z4 860 aaKnown RBP17■□□□□ 0.31
UBE3A-224ENST00000635914 DCAF8L1A6NGE4 600 aa17■□□□□ 0.31
UBE3A-224ENST00000635914 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
UBE3A-224ENST00000635914 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.312e-7■■■■□ 25
UBE3A-224ENST00000635914 ODF2Q5BJF6 829 aa17■□□□□ 0.31
UBE3A-224ENST00000635914 TNIKQ9UKE5 1360 aa17■□□□□ 0.31
UBE3A-224ENST00000635914 FMN1Q68DA7 1419 aa17■□□□□ 0.31
UBE3A-224ENST00000635914 CCDC18Q5T9S5 1454 aa17■□□□□ 0.31
UBE3A-224ENST00000635914 SKOR2Q2VWA4 1001 aaPredicted RBP17■□□□□ 0.31
UBE3A-224ENST00000635914 TOMM22Q9NS69 142 aa16.99■□□□□ 0.31
UBE3A-224ENST00000635914 TRIM29Q14134 588 aa16.99■□□□□ 0.31
UBE3A-224ENST00000635914 FAM184AQ8NB25 1140 aa16.98■□□□□ 0.31
UBE3A-224ENST00000635914 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
UBE3A-224ENST00000635914 RUFY1Q96T51 708 aa16.98■□□□□ 0.31
UBE3A-224ENST00000635914 ACBD3Q9H3P7 528 aa16.98■□□□□ 0.31
UBE3A-224ENST00000635914 CWC22Q9HCG8 908 aaKnown RBP16.98■□□□□ 0.31
UBE3A-224ENST00000635914 BECN2A8MW95 431 aa16.97■□□□□ 0.31
UBE3A-224ENST00000635914 RCAN3Q9UKA8 241 aa16.97■□□□□ 0.31
UBE3A-224ENST00000635914 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.97■□□□□ 0.318e-7■■■■■ 64.5
UBE3A-224ENST00000635914 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
UBE3A-224ENST00000635914 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
UBE3A-224ENST00000635914 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.31
UBE3A-224ENST00000635914 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
UBE3A-224ENST00000635914 GZF1Q9H116 711 aaPredicted RBP16.96■□□□□ 0.31
UBE3A-224ENST00000635914 ZRSR2Q15696 482 aaKnown RBP16.96■□□□□ 0.31
UBE3A-224ENST00000635914 CT47A1Q5JQC4 288 aaPredicted RBP16.95■□□□□ 0.3
UBE3A-224ENST00000635914 RUFY2Q8WXA3 655 aa16.94■□□□□ 0.3
UBE3A-224ENST00000635914 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
UBE3A-224ENST00000635914 ANKRD30AQ9BXX3 1397 aa16.94■□□□□ 0.3
UBE3A-224ENST00000635914 CCAR2Q8N163 923 aaKnown RBP16.93■□□□□ 0.3
UBE3A-224ENST00000635914 R3HCC1Q9Y3T6 440 aaKnown RBP16.93■□□□□ 0.3
UBE3A-224ENST00000635914 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
UBE3A-224ENST00000635914 VPS37DQ86XT2 251 aa16.93■□□□□ 0.3
UBE3A-224ENST00000635914 MLECQ14165 292 aa16.93■□□□□ 0.3
UBE3A-224ENST00000635914 EPS15P42566 896 aa16.92■□□□□ 0.3
UBE3A-224ENST00000635914 PCMTD1Q96MG8 357 aaPredicted RBP16.92■□□□□ 0.3
UBE3A-224ENST00000635914 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.32e-6■■■□□ 15.5
UBE3A-224ENST00000635914 AMPHP49418 695 aa16.91■□□□□ 0.3
UBE3A-224ENST00000635914 STK26Q9P289 416 aa16.91■□□□□ 0.3
UBE3A-224ENST00000635914 C1orf141Q5JVX7 400 aa16.91■□□□□ 0.3
UBE3A-224ENST00000635914 SLKQ9H2G2 1235 aaPredicted RBP16.9■□□□□ 0.3
UBE3A-224ENST00000635914 MFAP1P55081 439 aaKnown RBP16.9■□□□□ 0.3
UBE3A-224ENST00000635914 CENPJQ9HC77 1338 aaPredicted RBP16.9■□□□□ 0.3
UBE3A-224ENST00000635914 RSPH6AQ9H0K4 717 aa16.9■□□□□ 0.3
UBE3A-224ENST00000635914 WWC2Q6AWC2 1192 aa16.9■□□□□ 0.3
UBE3A-224ENST00000635914 REC8O95072 547 aa16.89■□□□□ 0.29
UBE3A-224ENST00000635914 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.29
UBE3A-224ENST00000635914 ERICH2A1L162 156 aa16.89■□□□□ 0.29
UBE3A-224ENST00000635914 RNF20Q5VTR2 975 aa16.88■□□□□ 0.29
UBE3A-224ENST00000635914 ARID3AQ99856 593 aa16.88■□□□□ 0.29
UBE3A-224ENST00000635914 TRDNQ13061 729 aa16.87■□□□□ 0.29
UBE3A-224ENST00000635914 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
UBE3A-224ENST00000635914 NAT10Q9H0A0 1025 aaKnown RBP16.87■□□□□ 0.29
UBE3A-224ENST00000635914 ZKSCAN1P17029 563 aaPredicted RBP16.87■□□□□ 0.29
UBE3A-224ENST00000635914 BRMS1Q9HCU9 246 aa16.87■□□□□ 0.29
UBE3A-224ENST00000635914 DIAPH3Q9NSV4 1193 aa16.87■□□□□ 0.29
UBE3A-224ENST00000635914 ARGLU1Q9NWB6 273 aaPredicted RBP16.87■□□□□ 0.29
UBE3A-224ENST00000635914 HSP90AA2PQ14568 343 aaPredicted RBP16.87■□□□□ 0.29
UBE3A-224ENST00000635914 PATL2C9JE40 543 aaKnown RBP16.86■□□□□ 0.29
UBE3A-224ENST00000635914 SLC4A10Q6U841 1118 aa16.86■□□□□ 0.29
UBE3A-224ENST00000635914 PDE3BQ13370 1112 aa16.86■□□□□ 0.29
UBE3A-224ENST00000635914 TTC5Q8N0Z6 440 aa16.85■□□□□ 0.29
UBE3A-224ENST00000635914 CPLX1O14810 134 aa16.85■□□□□ 0.29
UBE3A-224ENST00000635914 CUX2O14529 1486 aa16.85■□□□□ 0.29
UBE3A-224ENST00000635914 MCTP1Q6DN14 999 aa16.85■□□□□ 0.29
UBE3A-224ENST00000635914 HSP90B2PQ58FF3 399 aa16.84■□□□□ 0.29
UBE3A-224ENST00000635914 KIF15Q9NS87 1388 aa16.84■□□□□ 0.29
UBE3A-224ENST00000635914 SAFBQ15424 915 aaKnown RBP eCLIP16.84■□□□□ 0.29
UBE3A-224ENST00000635914 CGNL1Q0VF96 1302 aa16.83■□□□□ 0.29
UBE3A-224ENST00000635914 CWC15Q9P013 229 aaKnown RBP16.83■□□□□ 0.28
UBE3A-224ENST00000635914 EVA1CP58658 441 aa16.82■□□□□ 0.28
UBE3A-224ENST00000635914 FBXO3Q9UK99 471 aa16.82■□□□□ 0.28
UBE3A-224ENST00000635914 MAP7D2Q96T17 732 aa16.82■□□□□ 0.28
UBE3A-224ENST00000635914 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
UBE3A-224ENST00000635914 RSPH4AQ5TD94 716 aa16.81■□□□□ 0.28
UBE3A-224ENST00000635914 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
UBE3A-224ENST00000635914 XBP1P17861 261 aa16.81■□□□□ 0.28
UBE3A-224ENST00000635914 ANKRD18AQ8IVF6 992 aa16.81■□□□□ 0.28
UBE3A-224ENST00000635914 ZNF771Q7L3S4 317 aaPredicted RBP16.81■□□□□ 0.28
UBE3A-224ENST00000635914 HOMER1Q86YM7 354 aa16.8■□□□□ 0.28
UBE3A-224ENST00000635914 HSP90AB2PQ58FF8 381 aa16.8■□□□□ 0.28
UBE3A-224ENST00000635914 GGT6Q6P531 493 aa16.8■□□□□ 0.28
UBE3A-224ENST00000635914 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 339.8 ms