RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
PTPN11-205ENST00000635625 CNTLNQ9NXG0 1405 aa17.32■□□□□ 0.36
PTPN11-205ENST00000635625 TTC37Q6PGP7 1564 aa17.3■□□□□ 0.36
PTPN11-205ENST00000635625 KIF15Q9NS87 1388 aa17.3■□□□□ 0.36
PTPN11-205ENST00000635625 HIRIP3Q9BW71 556 aaPredicted RBP17.3■□□□□ 0.36
PTPN11-205ENST00000635625 UNC13BO14795 1591 aa17.29■□□□□ 0.36
PTPN11-205ENST00000635625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.29■□□□□ 0.36
PTPN11-205ENST00000635625 UHRF1BP1Q6BDS2 1440 aa17.29■□□□□ 0.36
PTPN11-205ENST00000635625 SPATA31E1Q6ZUB1 1445 aa17.29■□□□□ 0.36
PTPN11-205ENST00000635625 WASHC2AQ641Q2 1341 aa17.28■□□□□ 0.36
PTPN11-205ENST00000635625 ARHGAP5Q13017 1502 aa17.28■□□□□ 0.36
PTPN11-205ENST00000635625 CCDC7Q96M83 1385 aa17.26■□□□□ 0.35
PTPN11-205ENST00000635625 NUP155O75694 1391 aa17.26■□□□□ 0.35
PTPN11-205ENST00000635625 SYCP2Q9BX26 1530 aa17.25■□□□□ 0.35
PTPN11-205ENST00000635625 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
PTPN11-205ENST00000635625 ARAP3Q8WWN8 1544 aa17.25■□□□□ 0.35
PTPN11-205ENST00000635625 DSG3P32926 999 aa17.25■□□□□ 0.35
PTPN11-205ENST00000635625 PKD2Q13563 968 aa17.25■□□□□ 0.35
PTPN11-205ENST00000635625 RALGAPBQ86X10 1494 aa17.24■□□□□ 0.35
PTPN11-205ENST00000635625 KCNH8Q96L42 1107 aa17.23■□□□□ 0.35
PTPN11-205ENST00000635625 ARID4BQ4LE39 1312 aaPredicted RBP17.23■□□□□ 0.35
PTPN11-205ENST00000635625 FAM135AQ9P2D6 1515 aa17.22■□□□□ 0.35
PTPN11-205ENST00000635625 NBPF8Q3BBV2 869 aa17.22■□□□□ 0.35
PTPN11-205ENST00000635625 IQGAP3Q86VI3 1631 aa17.22■□□□□ 0.35
PTPN11-205ENST00000635625 KDM5CP41229 1560 aa17.21■□□□□ 0.35
PTPN11-205ENST00000635625 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
PTPN11-205ENST00000635625 DUOX2Q9NRD8 1548 aa17.21■□□□□ 0.34
PTPN11-205ENST00000635625 ABCB7O75027 752 aa17.2■□□□□ 0.34
PTPN11-205ENST00000635625 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
PTPN11-205ENST00000635625 PLCH2O75038 1416 aa17.19■□□□□ 0.34
PTPN11-205ENST00000635625 ERBINQ96RT1 1412 aa17.19■□□□□ 0.34
PTPN11-205ENST00000635625 HNRNPMP52272 730 aaKnown RBP eCLIP17.18■□□□□ 0.34
PTPN11-205ENST00000635625 ABCC1P33527 1531 aa17.18■□□□□ 0.34
PTPN11-205ENST00000635625 POLA2Q14181 598 aa17.16■□□□□ 0.34
PTPN11-205ENST00000635625 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
PTPN11-205ENST00000635625 USP47Q96K76 1375 aa17.15■□□□□ 0.34
PTPN11-205ENST00000635625 LAMC1P11047 1609 aa17.14■□□□□ 0.33
PTPN11-205ENST00000635625 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
PTPN11-205ENST00000635625 ATP10AO60312 1499 aa17.13■□□□□ 0.33
PTPN11-205ENST00000635625 EIF2AK4Q9P2K8 1649 aaKnown RBP17.11■□□□□ 0.33
PTPN11-205ENST00000635625 EFCAB2Q5VUJ9 269 aa17.1■□□□□ 0.33
PTPN11-205ENST00000635625 CCDC144AA2RUR9 1427 aa17.1■□□□□ 0.33
PTPN11-205ENST00000635625 RTEL1-TNFRSF6BF6WH68 1400 aa17.1■□□□□ 0.33
PTPN11-205ENST00000635625 BCORL1Q5H9F3 1711 aa17.1■□□□□ 0.33
PTPN11-205ENST00000635625 NEFLP07196 543 aa17.09■□□□□ 0.33
PTPN11-205ENST00000635625 PRKRIP1Q9H875 184 aaPredicted RBP17.09■□□□□ 0.33
PTPN11-205ENST00000635625 TRPM1Q7Z4N2 1603 aa17.09■□□□□ 0.33
PTPN11-205ENST00000635625 C11orf95C9JLR9 678 aaPredicted RBP17.07■□□□□ 0.32
PTPN11-205ENST00000635625 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
PTPN11-205ENST00000635625 ABCA9Q8IUA7 1624 aa17.06■□□□□ 0.32
PTPN11-205ENST00000635625 WDR7Q9Y4E6 1490 aa17.06■□□□□ 0.32
PTPN11-205ENST00000635625 ZFYVE16Q7Z3T8 1539 aa17.04■□□□□ 0.32
PTPN11-205ENST00000635625 DEPDC5O75140 1603 aa17.04■□□□□ 0.32
PTPN11-205ENST00000635625 KTN1Q86UP2 1357 aaKnown RBP17.04■□□□□ 0.32
PTPN11-205ENST00000635625 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
PTPN11-205ENST00000635625 KIF13AQ9H1H9 1805 aa17.03■□□□□ 0.32
PTPN11-205ENST00000635625 E9PCH4 1651 aa17.03■□□□□ 0.32
PTPN11-205ENST00000635625 INO80Q9ULG1 1556 aaPredicted RBP17.02■□□□□ 0.32
PTPN11-205ENST00000635625 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.31
PTPN11-205ENST00000635625 DHX29Q7Z478 1369 aaKnown RBP17.02■□□□□ 0.31
PTPN11-205ENST00000635625 PLA2R1Q13018 1463 aa17.01■□□□□ 0.31
PTPN11-205ENST00000635625 CARD11Q9BXL7 1154 aa17.01■□□□□ 0.31
PTPN11-205ENST00000635625 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN11-205ENST00000635625 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
PTPN11-205ENST00000635625 A2MP01023 1474 aa16.99■□□□□ 0.31
PTPN11-205ENST00000635625 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
PTPN11-205ENST00000635625 ZNF326Q5BKZ1 582 aaKnown RBP16.99■□□□□ 0.31
PTPN11-205ENST00000635625 RNF17Q9BXT8 1623 aaKnown RBP16.98■□□□□ 0.31
PTPN11-205ENST00000635625 NEURL4Q96JN8 1562 aa16.98■□□□□ 0.31
PTPN11-205ENST00000635625 TET3O43151 1660 aa16.98■□□□□ 0.31
PTPN11-205ENST00000635625 DCAF11Q8TEB1 546 aa16.97■□□□□ 0.31
PTPN11-205ENST00000635625 TRAPPC8Q9Y2L5 1435 aa16.97■□□□□ 0.31
PTPN11-205ENST00000635625 TRPM2O94759 1503 aa16.97■□□□□ 0.31
PTPN11-205ENST00000635625 MRS2Q9HD23 443 aa16.97■□□□□ 0.31
PTPN11-205ENST00000635625 ATP7AQ04656 1500 aa16.97■□□□□ 0.31
PTPN11-205ENST00000635625 CEP152O94986 1710 aa16.96■□□□□ 0.31
PTPN11-205ENST00000635625 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
PTPN11-205ENST00000635625 CFAP74Q9C0B2 1584 aa16.96■□□□□ 0.31
PTPN11-205ENST00000635625 FKBP8Q14318 412 aa16.96■□□□□ 0.31
PTPN11-205ENST00000635625 ERICH6BQ5W0A0 696 aa16.96■□□□□ 0.31
PTPN11-205ENST00000635625 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
PTPN11-205ENST00000635625 SPHKAPQ2M3C7 1700 aa16.96■□□□□ 0.31
PTPN11-205ENST00000635625 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.3
PTPN11-205ENST00000635625 VWDEQ8N2E2 1590 aa16.95■□□□□ 0.3
PTPN11-205ENST00000635625 DIP2BQ9P265 1576 aa16.95■□□□□ 0.3
PTPN11-205ENST00000635625 FANCAO15360 1455 aa16.94■□□□□ 0.3
PTPN11-205ENST00000635625 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
PTPN11-205ENST00000635625 PTPRTO14522 1441 aa16.91■□□□□ 0.3
PTPN11-205ENST00000635625 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
PTPN11-205ENST00000635625 COL17A1Q9UMD9 1497 aaPredicted RBP16.91■□□□□ 0.3
PTPN11-205ENST00000635625 KANK1Q14678 1352 aa16.9■□□□□ 0.3
PTPN11-205ENST00000635625 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.3
PTPN11-205ENST00000635625 MADDQ8WXG6 1647 aa16.89■□□□□ 0.29
PTPN11-205ENST00000635625 ADGRL1O94910 1474 aa16.89■□□□□ 0.29
PTPN11-205ENST00000635625 KIAA1210Q9ULL0 1709 aa16.89■□□□□ 0.29
PTPN11-205ENST00000635625 TSPOAP1O95153 1857 aa16.89■□□□□ 0.29
PTPN11-205ENST00000635625 ST20-MTHFSA0A0A6YYL1 179 aa16.88■□□□□ 0.29
PTPN11-205ENST00000635625 RALBP1Q15311 655 aa16.88■□□□□ 0.29
PTPN11-205ENST00000635625 IQGAP1P46940 1657 aa16.87■□□□□ 0.29
PTPN11-205ENST00000635625 WASHC2CQ9Y4E1 1318 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms