RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 RABGEF1Q9UJ41 708 aa6.59□□□□□ -1.35
PSPC1-208ENST00000635562 PTPN5P54829 565 aa6.58□□□□□ -1.36
PSPC1-208ENST00000635562 CAMK2BQ13554 666 aa6.58□□□□□ -1.36
PSPC1-208ENST00000635562 PCDHGA10Q9Y5H3 936 aa6.58□□□□□ -1.36
PSPC1-208ENST00000635562 ONECUT3O60422 494 aaPredicted RBP6.57□□□□□ -1.36
PSPC1-208ENST00000635562 LAPTM4BQ86VI4 370 aa6.57□□□□□ -1.36
PSPC1-208ENST00000635562 BBXQ8WY36 941 aaPredicted RBP6.57□□□□□ -1.36
PSPC1-208ENST00000635562 NYAP1Q6ZVC0 841 aa6.56□□□□□ -1.36
PSPC1-208ENST00000635562 ANKK1Q8NFD2 765 aa6.56□□□□□ -1.36
PSPC1-208ENST00000635562 CADPS2Q86UW7 1296 aa6.54□□□□□ -1.36
PSPC1-208ENST00000635562 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.52□□□□□ -1.37
PSPC1-208ENST00000635562 SPDYE16A6NNV3 312 aaPredicted RBP6.51□□□□□ -1.37
PSPC1-208ENST00000635562 C6orf132Q5T0Z8 1188 aa6.51□□□□□ -1.37
PSPC1-208ENST00000635562 A0A0G2JS52 829 aa6.5□□□□□ -1.37
PSPC1-208ENST00000635562 DPYSL4O14531 572 aa6.5□□□□□ -1.37
PSPC1-208ENST00000635562 COL9A1P20849 921 aa6.5□□□□□ -1.37
PSPC1-208ENST00000635562 SOWAHBA6NEL2 793 aa6.49□□□□□ -1.37
PSPC1-208ENST00000635562 TRIM6-TRIM34B2RNG4 842 aa6.49□□□□□ -1.37
PSPC1-208ENST00000635562 ITGBL1O95965 494 aaPredicted RBP6.49□□□□□ -1.37
PSPC1-208ENST00000635562 PDIA6Q15084 440 aa6.49□□□□□ -1.37
PSPC1-208ENST00000635562 PROX2Q3B8N5 592 aa6.49□□□□□ -1.37
PSPC1-208ENST00000635562 SPRYD3Q8NCJ5 442 aa6.49□□□□□ -1.37
PSPC1-208ENST00000635562 ZFRQ96KR1 1074 aaKnown RBP6.49□□□□□ -1.37
PSPC1-208ENST00000635562 FAM98CQ17RN3 349 aaKnown RBP6.48□□□□□ -1.37
PSPC1-208ENST00000635562 KIAA1468Q9P260 1216 aa6.48□□□□□ -1.37
PSPC1-208ENST00000635562 EN1Q05925 392 aaPredicted RBP6.47□□□□□ -1.37
PSPC1-208ENST00000635562 CERKQ8TCT0 537 aa6.47□□□□□ -1.37
PSPC1-208ENST00000635562 PACS2Q86VP3 889 aa6.46□□□□□ -1.38
PSPC1-208ENST00000635562 ARIH1Q9Y4X5 557 aaPredicted RBP6.46□□□□□ -1.38
PSPC1-208ENST00000635562 MAP3K7O43318 606 aa6.45□□□□□ -1.38
PSPC1-208ENST00000635562 NBR1Q14596 966 aa6.45□□□□□ -1.38
PSPC1-208ENST00000635562 DDX12PQ92771 950 aa6.45□□□□□ -1.38
PSPC1-208ENST00000635562 LRCH3Q96II8 777 aa6.45□□□□□ -1.38
PSPC1-208ENST00000635562 WDR70Q9NW82 654 aa6.45□□□□□ -1.38
PSPC1-208ENST00000635562 BCAMP50895 628 aa6.44□□□□□ -1.38
PSPC1-208ENST00000635562 HAP1P54257 671 aaPredicted RBP6.44□□□□□ -1.38
PSPC1-208ENST00000635562 E2F4Q16254 413 aa6.44□□□□□ -1.38
PSPC1-208ENST00000635562 PAXIP1Q6ZW49 1069 aaPredicted RBP6.44□□□□□ -1.38
PSPC1-208ENST00000635562 RBM33Q96EV2 1170 aaKnown RBP6.44□□□□□ -1.38
PSPC1-208ENST00000635562 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.44□□□□□ -1.38
PSPC1-208ENST00000635562 TSR3Q9UJK0 312 aaKnown RBP6.44□□□□□ -1.38
PSPC1-208ENST00000635562 IRX2Q9BZI1 471 aaPredicted RBP6.43□□□□□ -1.38
PSPC1-208ENST00000635562 KCNC4Q03721 635 aa6.42□□□□□ -1.38
PSPC1-208ENST00000635562 SEPT9Q9UHD8 586 aaPredicted RBP6.42□□□□□ -1.38
PSPC1-208ENST00000635562 VSIG10Q8N0Z9 540 aa6.41□□□□□ -1.38
PSPC1-208ENST00000635562 NECTIN2Q92692 538 aa6.41□□□□□ -1.38
PSPC1-208ENST00000635562 WBP1LQ9NX94 342 aa6.41□□□□□ -1.38
PSPC1-208ENST00000635562 RBM27Q9P2N5 1060 aaKnown RBP6.41□□□□□ -1.38
PSPC1-208ENST00000635562 NBPF26B4DH59 902 aa6.4□□□□□ -1.38
PSPC1-208ENST00000635562 CFAP44Q96MT7 982 aa6.4□□□□□ -1.38
PSPC1-208ENST00000635562 HPS5Q9UPZ3 1129 aa6.4□□□□□ -1.38
PSPC1-208ENST00000635562 PRSS12P56730 875 aa6.39□□□□□ -1.39
PSPC1-208ENST00000635562 CDCA7LQ96GN5 454 aa6.39□□□□□ -1.39
PSPC1-208ENST00000635562 TSKSQ9UJT2 592 aa6.39□□□□□ -1.39
PSPC1-208ENST00000635562 HDGFP51858 240 aaKnown RBP6.38□□□□□ -1.39
PSPC1-208ENST00000635562 TSR1Q2NL82 804 aaKnown RBP6.38□□□□□ -1.39
PSPC1-208ENST00000635562 PPP4CP60510 307 aa6.37□□□□□ -1.39
PSPC1-208ENST00000635562 KDM2AQ9Y2K7 1162 aa6.37□□□□□ -1.39
PSPC1-208ENST00000635562 TSHZ2Q9NRE2 1034 aa6.36□□□□□ -1.39
PSPC1-208ENST00000635562 GRXCR2A6NFK2 248 aa6.35□□□□□ -1.39
PSPC1-208ENST00000635562 SLC4A3P48751 1232 aa6.35□□□□□ -1.39
PSPC1-208ENST00000635562 LAPTM4AQ15012 233 aa6.35□□□□□ -1.39
PSPC1-208ENST00000635562 TATDN2Q93075 761 aa6.34□□□□□ -1.39
PSPC1-208ENST00000635562 OSBPP22059 807 aa6.33□□□□□ -1.4
PSPC1-208ENST00000635562 SAMD7Q7Z3H4 446 aa6.33□□□□□ -1.4
PSPC1-208ENST00000635562 PNMA3Q9UL41 463 aa6.33□□□□□ -1.4
PSPC1-208ENST00000635562 IL21Q9HBE4 155 aa6.32□□□□□ -1.4
PSPC1-208ENST00000635562 PRR14Q9BWN1 585 aa6.31□□□□□ -1.4
PSPC1-208ENST00000635562 TJAP1Q5JTD0 557 aa6.3□□□□□ -1.4
PSPC1-208ENST00000635562 SLF2Q8IX21 1173 aa6.3□□□□□ -1.4
PSPC1-208ENST00000635562 ARHGEF1Q92888 912 aaKnown RBP6.3□□□□□ -1.4
PSPC1-208ENST00000635562 SMAPO00193 183 aa6.29□□□□□ -1.4
PSPC1-208ENST00000635562 NUDT18Q6ZVK8 323 aa6.29□□□□□ -1.4
PSPC1-208ENST00000635562 TTC13Q8NBP0 860 aa6.29□□□□□ -1.4
PSPC1-208ENST00000635562 MTRQ99707 1265 aa6.29□□□□□ -1.4
PSPC1-208ENST00000635562 FAM198AQ9UFP1 575 aa6.29□□□□□ -1.4
PSPC1-208ENST00000635562 RNF40O75150 1001 aa6.28□□□□□ -1.4
PSPC1-208ENST00000635562 GGCXP38435 758 aa6.28□□□□□ -1.4
PSPC1-208ENST00000635562 PRIM1P49642 420 aaKnown RBP6.28□□□□□ -1.4
PSPC1-208ENST00000635562 Q6ZNB5 142 aa6.28□□□□□ -1.4
PSPC1-208ENST00000635562 CDHR5Q9HBB8 845 aa6.28□□□□□ -1.4
PSPC1-208ENST00000635562 V9GY48 417 aaPredicted RBP6.27□□□□□ -1.41
PSPC1-208ENST00000635562 PADI6Q6TGC4 694 aa6.26□□□□□ -1.41
PSPC1-208ENST00000635562 P3H3Q8IVL6 736 aa6.25□□□□□ -1.41
PSPC1-208ENST00000635562 NPDC1Q9NQX5 325 aaPredicted RBP6.25□□□□□ -1.41
PSPC1-208ENST00000635562 APLP1P51693 650 aa6.24□□□□□ -1.41
PSPC1-208ENST00000635562 TMUB1Q9BVT8 246 aa6.24□□□□□ -1.41
PSPC1-208ENST00000635562 C3orf80F5H4A9 247 aa6.23□□□□□ -1.41
PSPC1-208ENST00000635562 SWT1Q5T5J6 900 aaKnown RBP6.23□□□□□ -1.41
PSPC1-208ENST00000635562 PPP1R18Q6NYC8 613 aa6.23□□□□□ -1.41
PSPC1-208ENST00000635562 BCANQ96GW7 911 aa6.23□□□□□ -1.41
PSPC1-208ENST00000635562 PRKD2Q9BZL6 878 aa6.23□□□□□ -1.41
PSPC1-208ENST00000635562 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.23□□□□□ -1.41
PSPC1-208ENST00000635562 NRG2O14511 850 aaPredicted RBP6.22□□□□□ -1.41
PSPC1-208ENST00000635562 RBM46Q8TBY0 533 aaKnown RBP6.22□□□□□ -1.41
PSPC1-208ENST00000635562 EYA1Q99502 592 aa6.22□□□□□ -1.41
PSPC1-208ENST00000635562 GFRA3O60609 400 aa6.21□□□□□ -1.42
PSPC1-208ENST00000635562 DNAJB2P25686 324 aa6.21□□□□□ -1.42
PSPC1-208ENST00000635562 PTGDRQ13258 359 aa6.21□□□□□ -1.42
PSPC1-208ENST00000635562 KCNV2Q8TDN2 545 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms