RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 ZSWIM6Q9HCJ5 1215 aa6.65□□□□□ -1.34
CHD2-220ENST00000630813 DHX57Q6P158 1386 aaKnown RBP6.65□□□□□ -1.35
CHD2-220ENST00000630813 GRIN2BQ13224 1484 aa6.65□□□□□ -1.35
CHD2-220ENST00000630813 FYCO1Q9BQS8 1478 aa6.65□□□□□ -1.35
CHD2-220ENST00000630813 KLHL34Q8N239 644 aa6.64□□□□□ -1.35
CHD2-220ENST00000630813 MAGI3Q5TCQ9 1506 aa6.63□□□□□ -1.35
CHD2-220ENST00000630813 GPR153Q6NV75 609 aa6.62□□□□□ -1.35
CHD2-220ENST00000630813 PLA2G2EQ9NZK7 142 aa6.62□□□□□ -1.35
CHD2-220ENST00000630813 EIF4G3O43432 1585 aaKnown RBP6.61□□□□□ -1.35
CHD2-220ENST00000630813 UGGT2Q9NYU1 1516 aa6.6□□□□□ -1.35
CHD2-220ENST00000630813 FMN1Q68DA7 1419 aa6.6□□□□□ -1.35
CHD2-220ENST00000630813 FBXO3Q9UK99 471 aa6.6□□□□□ -1.35
CHD2-220ENST00000630813 IQGAP2Q13576 1575 aa6.6□□□□□ -1.35
CHD2-220ENST00000630813 DISP1Q96F81 1524 aa6.6□□□□□ -1.35
CHD2-220ENST00000630813 PTPRKQ15262 1439 aa6.59□□□□□ -1.35
CHD2-220ENST00000630813 LSM11P83369 360 aaKnown RBP eCLIP6.59□□□□□ -1.35
CHD2-220ENST00000630813 FKBP8Q14318 412 aa6.59□□□□□ -1.35
CHD2-220ENST00000630813 ATP1B4Q9UN42 357 aaPredicted RBP6.59□□□□□ -1.35
CHD2-220ENST00000630813 ARHGEF11O15085 1522 aa6.59□□□□□ -1.35
CHD2-220ENST00000630813 ERCC6Q03468 1493 aa6.59□□□□□ -1.36
CHD2-220ENST00000630813 GRIN2AQ12879 1464 aa6.59□□□□□ -1.36
CHD2-220ENST00000630813 RAB3GAP2Q9H2M9 1393 aa6.58□□□□□ -1.36
CHD2-220ENST00000630813 ITGAEP38570 1179 aa6.58□□□□□ -1.36
CHD2-220ENST00000630813 MAPKBP1O60336 1514 aa6.58□□□□□ -1.36
CHD2-220ENST00000630813 KIAA0586Q9BVV6 1533 aa6.58□□□□□ -1.36
CHD2-220ENST00000630813 CEP170Q5SW79 1584 aa6.57□□□□□ -1.36
CHD2-220ENST00000630813 ARSIQ5FYB1 569 aa6.57□□□□□ -1.36
CHD2-220ENST00000630813 TMEM92Q6UXU6 159 aa6.57□□□□□ -1.36
CHD2-220ENST00000630813 FGD6Q6ZV73 1430 aa6.57□□□□□ -1.36
CHD2-220ENST00000630813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.57□□□□□ -1.36
CHD2-220ENST00000630813 NCOA2Q15596 1464 aa6.56□□□□□ -1.36
CHD2-220ENST00000630813 MICALL2Q8IY33 904 aa6.56□□□□□ -1.36
CHD2-220ENST00000630813 SETD5Q9C0A6 1442 aa6.56□□□□□ -1.36
CHD2-220ENST00000630813 EPRSP07814 1512 aaKnown RBP6.55□□□□□ -1.36
CHD2-220ENST00000630813 CDK13Q14004 1512 aaKnown RBP6.55□□□□□ -1.36
CHD2-220ENST00000630813 MAGI1Q96QZ7 1491 aaPredicted RBP6.55□□□□□ -1.36
CHD2-220ENST00000630813 KIAA0556O60303 1618 aa6.55□□□□□ -1.36
CHD2-220ENST00000630813 FAM50AQ14320 339 aaKnown RBP6.55□□□□□ -1.36
CHD2-220ENST00000630813 HCSTQ9UBK5 93 aa6.55□□□□□ -1.36
CHD2-220ENST00000630813 NUP160Q12769 1436 aa6.55□□□□□ -1.36
CHD2-220ENST00000630813 SYNJ2O15056 1496 aa6.54□□□□□ -1.36
CHD2-220ENST00000630813 NUP153P49790 1475 aaKnown RBP6.54□□□□□ -1.36
CHD2-220ENST00000630813 CLSPNQ9HAW4 1339 aa6.54□□□□□ -1.36
CHD2-220ENST00000630813 ZNF316A6NFI3 1004 aaPredicted RBP6.54□□□□□ -1.36
CHD2-220ENST00000630813 EFCAB3Q8N7B9 438 aa6.54□□□□□ -1.36
CHD2-220ENST00000630813 EHBP1L1Q8N3D4 1523 aa6.54□□□□□ -1.36
CHD2-220ENST00000630813 MYOM3Q5VTT5 1437 aa6.53□□□□□ -1.36
CHD2-220ENST00000630813 MTUS2Q5JR59 1369 aa6.53□□□□□ -1.36
CHD2-220ENST00000630813 TCOF1Q13428 1488 aaKnown RBP6.53□□□□□ -1.36
CHD2-220ENST00000630813 HECW1Q76N89 1606 aa6.52□□□□□ -1.37
CHD2-220ENST00000630813 ARID3CA6NKF2 412 aa6.52□□□□□ -1.37
CHD2-220ENST00000630813 VASPP50552 380 aaPredicted RBP6.52□□□□□ -1.37
CHD2-220ENST00000630813 DIEXFQ68CQ4 756 aaKnown RBP6.52□□□□□ -1.37
CHD2-220ENST00000630813 KHSRPQ92945 711 aaKnown RBP eCLIP6.52□□□□□ -1.37
CHD2-220ENST00000630813 CCDC18Q5T9S5 1454 aa6.52□□□□□ -1.37
CHD2-220ENST00000630813 SUPT6HQ7KZ85 1726 aaKnown RBP6.51□□□□□ -1.37
CHD2-220ENST00000630813 SIN3AQ96ST3 1273 aa6.51□□□□□ -1.37
CHD2-220ENST00000630813 CIZ1Q9ULV3 898 aaPredicted RBP6.51□□□□□ -1.37
CHD2-220ENST00000630813 NAIPQ13075 1403 aa6.5□□□□□ -1.37
CHD2-220ENST00000630813 PTPN23Q9H3S7 1636 aa6.5□□□□□ -1.37
CHD2-220ENST00000630813 DENND4BO75064 1496 aaPredicted RBP6.5□□□□□ -1.37
CHD2-220ENST00000630813 PLB1Q6P1J6 1458 aa6.5□□□□□ -1.37
CHD2-220ENST00000630813 PBX2P40425 430 aa6.5□□□□□ -1.37
CHD2-220ENST00000630813 CHMP7Q8WUX9 453 aaPredicted RBP6.5□□□□□ -1.37
CHD2-220ENST00000630813 JPH4Q96JJ6 628 aa6.5□□□□□ -1.37
CHD2-220ENST00000630813 KDM6BO15054 1643 aa6.5□□□□□ -1.37
CHD2-220ENST00000630813 RAPGEF6Q8TEU7 1601 aa6.5□□□□□ -1.37
CHD2-220ENST00000630813 HFM1A2PYH4 1435 aa6.49□□□□□ -1.37
CHD2-220ENST00000630813 PRG4Q92954 1404 aaPredicted RBP6.49□□□□□ -1.37
CHD2-220ENST00000630813 AXIN2Q9Y2T1 843 aa6.48□□□□□ -1.37
CHD2-220ENST00000630813 ABCA8O94911 1581 aa6.48□□□□□ -1.37
CHD2-220ENST00000630813 ZNF644Q9H582 1327 aaPredicted RBP6.48□□□□□ -1.37
CHD2-220ENST00000630813 KDM5BQ9UGL1 1544 aa6.46□□□□□ -1.37
CHD2-220ENST00000630813 ABCC5O15440 1437 aa6.46□□□□□ -1.38
CHD2-220ENST00000630813 MIA2Q96PC5 1412 aa6.46□□□□□ -1.38
CHD2-220ENST00000630813 KIF14Q15058 1648 aa6.46□□□□□ -1.38
CHD2-220ENST00000630813 ATP10BO94823 1461 aa6.46□□□□□ -1.38
CHD2-220ENST00000630813 ERCC6L2Q5T890 1561 aa6.45□□□□□ -1.38
CHD2-220ENST00000630813 TROQ12816 1431 aaPredicted RBP6.45□□□□□ -1.38
CHD2-220ENST00000630813 POTEEQ6S8J3 1075 aa6.45□□□□□ -1.38
CHD2-220ENST00000630813 RRP7BPQ9NSQ0 103 aa6.45□□□□□ -1.38
CHD2-220ENST00000630813 GPATCH8Q9UKJ3 1502 aaKnown RBP6.45□□□□□ -1.38
CHD2-220ENST00000630813 CHD1O14646 1710 aa6.45□□□□□ -1.38
CHD2-220ENST00000630813 AKNAQ7Z591 1439 aa6.44□□□□□ -1.38
CHD2-220ENST00000630813 UACAQ9BZF9 1416 aa6.44□□□□□ -1.38
CHD2-220ENST00000630813 NUDT7P0C024 238 aa6.44□□□□□ -1.38
CHD2-220ENST00000630813 SPOCK2Q92563 424 aa6.44□□□□□ -1.38
CHD2-220ENST00000630813 MS4A4AQ96JQ5 239 aa6.44□□□□□ -1.38
CHD2-220ENST00000630813 CHIC2Q9UKJ5 165 aa6.44□□□□□ -1.38
CHD2-220ENST00000630813 ABCC10Q5T3U5 1492 aa6.44□□□□□ -1.38
CHD2-220ENST00000630813 SHROOM2Q13796 1616 aa6.43□□□□□ -1.38
CHD2-220ENST00000630813 ADCY10Q96PN6 1610 aa6.43□□□□□ -1.38
CHD2-220ENST00000630813 GCC2Q8IWJ2 1684 aa6.43□□□□□ -1.38
CHD2-220ENST00000630813 SOX12O15370 315 aa6.43□□□□□ -1.38
CHD2-220ENST00000630813 PPP1R15AO75807 674 aaPredicted RBP6.43□□□□□ -1.38
CHD2-220ENST00000630813 NEUROD1Q13562 356 aa6.43□□□□□ -1.38
CHD2-220ENST00000630813 ADGRD1Q6QNK2 874 aa6.43□□□□□ -1.38
CHD2-220ENST00000630813 DAPK1P53355 1430 aa6.42□□□□□ -1.38
CHD2-220ENST00000630813 CARMIL2Q6F5E8 1435 aa6.42□□□□□ -1.38
CHD2-220ENST00000630813 LHX6Q9UPM6 363 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms