RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 ADAM33Q9BZ11 813 aa7.53□□□□□ -1.2
CNOT1-223ENST00000628857 CDAN1Q8IWY9 1227 aa7.52□□□□□ -1.21
CNOT1-223ENST00000628857 ONECUT3O60422 494 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-223ENST00000628857 PPP1R3GB7ZBB8 358 aa7.5□□□□□ -1.21
CNOT1-223ENST00000628857 TK2O00142 265 aa7.5□□□□□ -1.21
CNOT1-223ENST00000628857 POTEEQ6S8J3 1075 aa7.5□□□□□ -1.21
CNOT1-223ENST00000628857 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.5□□□□□ -1.21
CNOT1-223ENST00000628857 MAP3K7O43318 606 aa7.49□□□□□ -1.21
CNOT1-223ENST00000628857 RBM27Q9P2N5 1060 aaKnown RBP7.49□□□□□ -1.21
CNOT1-223ENST00000628857 PRIM1P49642 420 aaKnown RBP7.47□□□□□ -1.21
CNOT1-223ENST00000628857 LSM11P83369 360 aaKnown RBP eCLIP7.47□□□□□ -1.21
CNOT1-223ENST00000628857 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
CNOT1-223ENST00000628857 KRTAP3-2Q9BYR7 98 aa7.47□□□□□ -1.21
CNOT1-223ENST00000628857 RBM33Q96EV2 1170 aaKnown RBP7.46□□□□□ -1.22
CNOT1-223ENST00000628857 KCNK17Q96T54 332 aa7.46□□□□□ -1.22
CNOT1-223ENST00000628857 NPDC1Q9NQX5 325 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-223ENST00000628857 ZBED2Q9BTP6 218 aa7.45□□□□□ -1.22
CNOT1-223ENST00000628857 FCHSD2O94868 740 aa7.44□□□□□ -1.22
CNOT1-223ENST00000628857 PSEN2P49810 448 aa7.44□□□□□ -1.22
CNOT1-223ENST00000628857 PTGDRQ13258 359 aa7.44□□□□□ -1.22
CNOT1-223ENST00000628857 TSR1Q2NL82 804 aaKnown RBP7.44□□□□□ -1.22
CNOT1-223ENST00000628857 HIC1Q14526 733 aa7.43□□□□□ -1.22
CNOT1-223ENST00000628857 RBM26Q5T8P6 1007 aaKnown RBP7.43□□□□□ -1.22
CNOT1-223ENST00000628857 TTC13Q8NBP0 860 aa7.43□□□□□ -1.22
CNOT1-223ENST00000628857 VPS9D1Q9Y2B5 631 aa7.43□□□□□ -1.22
CNOT1-223ENST00000628857 AXIN2Q9Y2T1 843 aa7.43□□□□□ -1.22
CNOT1-223ENST00000628857 COL9A1P20849 921 aa7.42□□□□□ -1.22
CNOT1-223ENST00000628857 PRSS12P56730 875 aa7.42□□□□□ -1.22
CNOT1-223ENST00000628857 DMRTA1Q5VZB9 504 aa7.42□□□□□ -1.22
CNOT1-223ENST00000628857 LMOD2Q6P5Q4 547 aa7.42□□□□□ -1.22
CNOT1-223ENST00000628857 NUTM2FA1L443 756 aa7.41□□□□□ -1.22
CNOT1-223ENST00000628857 TRIM6-TRIM34B2RNG4 842 aa7.41□□□□□ -1.22
CNOT1-223ENST00000628857 ADGRD1Q6QNK2 874 aa7.41□□□□□ -1.22
CNOT1-223ENST00000628857 CDCA7LQ96GN5 454 aa7.41□□□□□ -1.22
CNOT1-223ENST00000628857 RABGEF1Q9UJ41 708 aa7.41□□□□□ -1.22
CNOT1-223ENST00000628857 BHMG1C9JSJ3 638 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-223ENST00000628857 HRO43593 1189 aa7.4□□□□□ -1.22
CNOT1-223ENST00000628857 GPIHBP1Q8IV16 184 aa7.4□□□□□ -1.22
CNOT1-223ENST00000628857 GNPATO15228 680 aa7.39□□□□□ -1.23
CNOT1-223ENST00000628857 GPR37O15354 613 aa7.39□□□□□ -1.23
CNOT1-223ENST00000628857 PACS2Q86VP3 889 aa7.39□□□□□ -1.23
CNOT1-223ENST00000628857 CDHR5Q9HBB8 845 aa7.39□□□□□ -1.23
CNOT1-223ENST00000628857 ANKRD13DQ6ZTN6 518 aa7.38□□□□□ -1.23
CNOT1-223ENST00000628857 LAPTM4BQ86VI4 370 aa7.38□□□□□ -1.23
CNOT1-223ENST00000628857 NBPF3Q9H094 633 aa7.37□□□□□ -1.23
CNOT1-223ENST00000628857 TSKSQ9UJT2 592 aa7.36□□□□□ -1.23
CNOT1-223ENST00000628857 ZMYND10O75800 440 aa7.35□□□□□ -1.23
CNOT1-223ENST00000628857 PROX2Q3B8N5 592 aa7.35□□□□□ -1.23
CNOT1-223ENST00000628857 KIAA1468Q9P260 1216 aa7.35□□□□□ -1.23
CNOT1-223ENST00000628857 NBPF26B4DH59 902 aa7.34□□□□□ -1.23
CNOT1-223ENST00000628857 OATP04181 439 aa7.34□□□□□ -1.23
CNOT1-223ENST00000628857 BARGINQ6ZT62 677 aa7.34□□□□□ -1.23
CNOT1-223ENST00000628857 SPNS2Q8IVW8 549 aa7.34□□□□□ -1.23
CNOT1-223ENST00000628857 ZC3H15Q8WU90 426 aaKnown RBP7.34□□□□□ -1.23
CNOT1-223ENST00000628857 MINK1Q8N4C8 1332 aaPredicted RBP7.33□□□□□ -1.24
CNOT1-223ENST00000628857 PADI6Q6TGC4 694 aa7.33□□□□□ -1.24
CNOT1-223ENST00000628857 TATDN2Q93075 761 aa7.33□□□□□ -1.24
CNOT1-223ENST00000628857 STAC3Q96MF2 364 aa7.33□□□□□ -1.24
CNOT1-223ENST00000628857 FAM198AQ9UFP1 575 aa7.33□□□□□ -1.24
CNOT1-223ENST00000628857 MAP2K5Q13163 448 aa7.32□□□□□ -1.24
CNOT1-223ENST00000628857 MRPL50Q8N5N7 158 aaKnown RBP7.32□□□□□ -1.24
CNOT1-223ENST00000628857 FAM98CQ17RN3 349 aaKnown RBP7.31□□□□□ -1.24
CNOT1-223ENST00000628857 RBM46Q8TBY0 533 aaKnown RBP7.31□□□□□ -1.24
CNOT1-223ENST00000628857 EYA1Q99502 592 aa7.31□□□□□ -1.24
CNOT1-223ENST00000628857 ADGRG1Q9Y653 693 aa7.31□□□□□ -1.24
CNOT1-223ENST00000628857 IRF6O14896 467 aa7.3□□□□□ -1.24
CNOT1-223ENST00000628857 NUDT18Q6ZVK8 323 aa7.29□□□□□ -1.24
CNOT1-223ENST00000628857 PNMA3Q9UL41 463 aa7.29□□□□□ -1.24
CNOT1-223ENST00000628857 FECHP22830 423 aa7.28□□□□□ -1.24
CNOT1-223ENST00000628857 MYT1LQ9UL68 1186 aa7.28□□□□□ -1.24
CNOT1-223ENST00000628857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.27□□□□□ -1.25
CNOT1-223ENST00000628857 PXYLP1Q8TE99 480 aa7.27□□□□□ -1.25
CNOT1-223ENST00000628857 ZFRQ96KR1 1074 aaKnown RBP7.27□□□□□ -1.25
CNOT1-223ENST00000628857 GOLGA8CPA6NN73 597 aa7.26□□□□□ -1.25
CNOT1-223ENST00000628857 DNAJB2P25686 324 aa7.26□□□□□ -1.25
CNOT1-223ENST00000628857 HDGFP51858 240 aaKnown RBP7.26□□□□□ -1.25
CNOT1-223ENST00000628857 MMRN1Q13201 1228 aa7.26□□□□□ -1.25
CNOT1-223ENST00000628857 METTL3Q86U44 580 aaKnown RBP7.26□□□□□ -1.25
CNOT1-223ENST00000628857 C3orf80F5H4A9 247 aa7.25□□□□□ -1.25
CNOT1-223ENST00000628857 KRI1Q8N9T8 703 aaKnown RBP7.25□□□□□ -1.25
CNOT1-223ENST00000628857 NECTIN2Q92692 538 aa7.25□□□□□ -1.25
CNOT1-223ENST00000628857 ANKK1Q8NFD2 765 aa7.24□□□□□ -1.25
CNOT1-223ENST00000628857 AK7Q96M32 723 aa7.24□□□□□ -1.25
CNOT1-223ENST00000628857 TMEM134Q9H6X4 195 aa7.24□□□□□ -1.25
CNOT1-223ENST00000628857 SEPT9Q9UHD8 586 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-223ENST00000628857 RCCD1A6NED2 376 aa7.23□□□□□ -1.25
CNOT1-223ENST00000628857 SOWAHBA6NEL2 793 aa7.23□□□□□ -1.25
CNOT1-223ENST00000628857 WNT2BQ93097 391 aa7.23□□□□□ -1.25
CNOT1-223ENST00000628857 RNF166Q96A37 237 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-223ENST00000628857 SMAPO00193 183 aa7.22□□□□□ -1.25
CNOT1-223ENST00000628857 SLC4A3P48751 1232 aa7.22□□□□□ -1.25
CNOT1-223ENST00000628857 NYAP1Q6ZVC0 841 aa7.22□□□□□ -1.25
CNOT1-223ENST00000628857 CCDC102AQ96A19 550 aa7.22□□□□□ -1.25
CNOT1-223ENST00000628857 DAXXQ9UER7 740 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-223ENST00000628857 THSD4Q6ZMP0 1018 aa7.21□□□□□ -1.26
CNOT1-223ENST00000628857 SLF2Q8IX21 1173 aa7.21□□□□□ -1.26
CNOT1-223ENST00000628857 LRCH3Q96II8 777 aa7.21□□□□□ -1.26
CNOT1-223ENST00000628857 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-223ENST00000628857 AMHR2Q16671 573 aa7.2□□□□□ -1.26
CNOT1-223ENST00000628857 SAMD7Q7Z3H4 446 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms