RNA–Protein interactions for RNA: ENST00000622445.4

CACNB1-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 5 BASIC

Gene CACNB1, Length 3,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-212ENST00000622445 APAF1O14727 1248 aa16.73■□□□□ 0.27
CACNB1-212ENST00000622445 TEX14Q8IWB6 1497 aa16.73■□□□□ 0.27
CACNB1-212ENST00000622445 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
CACNB1-212ENST00000622445 SAFB2Q14151 953 aaKnown RBP eCLIP16.72■□□□□ 0.27
CACNB1-212ENST00000622445 SPATA31E1Q6ZUB1 1445 aa16.72■□□□□ 0.27
CACNB1-212ENST00000622445 LRRIQ1Q96JM4 1722 aa16.72■□□□□ 0.27
CACNB1-212ENST00000622445 CUL7Q14999 1698 aa16.71■□□□□ 0.27
CACNB1-212ENST00000622445 BCAR3O75815 825 aa16.71■□□□□ 0.27
CACNB1-212ENST00000622445 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
CACNB1-212ENST00000622445 HECW1Q76N89 1606 aa16.68■□□□□ 0.26
CACNB1-212ENST00000622445 IQGAP2Q13576 1575 aa16.68■□□□□ 0.26
CACNB1-212ENST00000622445 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
CACNB1-212ENST00000622445 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
CACNB1-212ENST00000622445 PZPP20742 1482 aa16.67■□□□□ 0.26
CACNB1-212ENST00000622445 CCDC144AA2RUR9 1427 aa16.67■□□□□ 0.26
CACNB1-212ENST00000622445 NFKBIBQ15653 356 aa16.67■□□□□ 0.26
CACNB1-212ENST00000622445 FRAT2O75474 233 aaPredicted RBP16.66■□□□□ 0.26
CACNB1-212ENST00000622445 DISP3Q9P2K9 1392 aa16.66■□□□□ 0.26
CACNB1-212ENST00000622445 ARHGEF11O15085 1522 aa16.66■□□□□ 0.26
CACNB1-212ENST00000622445 PANK1Q8TE04 598 aa16.66■□□□□ 0.26
CACNB1-212ENST00000622445 BRD4O60885 1362 aaPredicted RBP16.65■□□□□ 0.26
CACNB1-212ENST00000622445 NUP153P49790 1475 aaKnown RBP16.65■□□□□ 0.26
CACNB1-212ENST00000622445 PPM1GO15355 546 aaPredicted RBP16.65■□□□□ 0.26
CACNB1-212ENST00000622445 GOLGA2Q08379 1002 aa16.65■□□□□ 0.26
CACNB1-212ENST00000622445 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
CACNB1-212ENST00000622445 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
CACNB1-212ENST00000622445 C9orf84Q5VXU9 1444 aa16.63■□□□□ 0.25
CACNB1-212ENST00000622445 TCOF1Q13428 1488 aaKnown RBP16.63■□□□□ 0.25
CACNB1-212ENST00000622445 ROCK1Q13464 1354 aa16.62■□□□□ 0.25
CACNB1-212ENST00000622445 SPINK5Q9NQ38 1064 aaPredicted RBP16.62■□□□□ 0.25
CACNB1-212ENST00000622445 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
CACNB1-212ENST00000622445 SAMD9Q5K651 1589 aa16.61■□□□□ 0.25
CACNB1-212ENST00000622445 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.61■□□□□ 0.25
CACNB1-212ENST00000622445 DDRGK1Q96HY6 314 aa16.61■□□□□ 0.25
CACNB1-212ENST00000622445 BCORL1Q5H9F3 1711 aa16.61■□□□□ 0.25
CACNB1-212ENST00000622445 PPP2R1AP30153 589 aa16.6■□□□□ 0.25
CACNB1-212ENST00000622445 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
CACNB1-212ENST00000622445 PER1O15534 1290 aaPredicted RBP16.59■□□□□ 0.25
CACNB1-212ENST00000622445 AFAP1Q8N556 730 aa16.59■□□□□ 0.25
CACNB1-212ENST00000622445 PDE3BQ13370 1112 aa16.58■□□□□ 0.25
CACNB1-212ENST00000622445 RNF123Q5XPI4 1314 aa16.58■□□□□ 0.25
CACNB1-212ENST00000622445 GSE1Q14687 1217 aa16.58■□□□□ 0.24
CACNB1-212ENST00000622445 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
CACNB1-212ENST00000622445 TRAK1Q9UPV9 953 aa16.57■□□□□ 0.24
CACNB1-212ENST00000622445 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
CACNB1-212ENST00000622445 WDR62O43379 1518 aa16.56■□□□□ 0.24
CACNB1-212ENST00000622445 CFAP70Q5T0N1 1121 aa16.56■□□□□ 0.24
CACNB1-212ENST00000622445 FAM161AQ3B820 660 aa16.55■□□□□ 0.24
CACNB1-212ENST00000622445 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
CACNB1-212ENST00000622445 TESK2Q96S53 571 aa16.54■□□□□ 0.24
CACNB1-212ENST00000622445 KIF3BO15066 747 aa16.53■□□□□ 0.24
CACNB1-212ENST00000622445 PLEKHH1Q9ULM0 1364 aa16.53■□□□□ 0.24
CACNB1-212ENST00000622445 ARID4BQ4LE39 1312 aaPredicted RBP16.53■□□□□ 0.24
CACNB1-212ENST00000622445 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
CACNB1-212ENST00000622445 IGHDP01880 384 aa16.52■□□□□ 0.24
CACNB1-212ENST00000622445 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.24
CACNB1-212ENST00000622445 SEC24BO95487 1268 aa16.52■□□□□ 0.23
CACNB1-212ENST00000622445 MS4A1P11836 297 aa16.52■□□□□ 0.23
CACNB1-212ENST00000622445 TMEM132EQ6IEE7 984 aa16.52■□□□□ 0.23
CACNB1-212ENST00000622445 CENPQQ7L2Z9 268 aaPredicted RBP16.52■□□□□ 0.23
CACNB1-212ENST00000622445 ABCA5Q8WWZ7 1642 aa16.51■□□□□ 0.23
CACNB1-212ENST00000622445 KIAA0586Q9BVV6 1533 aa16.51■□□□□ 0.23
CACNB1-212ENST00000622445 KIF14Q15058 1648 aa16.51■□□□□ 0.23
CACNB1-212ENST00000622445 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
CACNB1-212ENST00000622445 GCC2Q8IWJ2 1684 aa16.51■□□□□ 0.23
CACNB1-212ENST00000622445 DISP1Q96F81 1524 aa16.51■□□□□ 0.23
CACNB1-212ENST00000622445 STK26Q9P289 416 aa16.5■□□□□ 0.23
CACNB1-212ENST00000622445 LRPPRCP42704 1394 aaKnown RBP16.5■□□□□ 0.23
CACNB1-212ENST00000622445 MORC1Q86VD1 984 aa16.5■□□□□ 0.23
CACNB1-212ENST00000622445 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
CACNB1-212ENST00000622445 PTPRGP23470 1445 aa16.49■□□□□ 0.23
CACNB1-212ENST00000622445 GGT6Q6P531 493 aa16.48■□□□□ 0.23
CACNB1-212ENST00000622445 POGKQ9P215 609 aa16.47■□□□□ 0.23
CACNB1-212ENST00000622445 ERBINQ96RT1 1412 aa16.47■□□□□ 0.23
CACNB1-212ENST00000622445 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
CACNB1-212ENST00000622445 U2AF1L5P0DN76 240 aaPredicted RBP16.46■□□□□ 0.23
CACNB1-212ENST00000622445 U2AF1Q01081 240 aaKnown RBP eCLIP16.46■□□□□ 0.23
CACNB1-212ENST00000622445 SLC12A5Q9H2X9 1139 aa16.46■□□□□ 0.23
CACNB1-212ENST00000622445 CENPJQ9HC77 1338 aaPredicted RBP16.46■□□□□ 0.23
CACNB1-212ENST00000622445 PARD3Q8TEW0 1356 aa16.46■□□□□ 0.22
CACNB1-212ENST00000622445 DNMT1P26358 1616 aaKnown RBP16.45■□□□□ 0.22
CACNB1-212ENST00000622445 C8orf34Q49A92 452 aa16.45■□□□□ 0.22
CACNB1-212ENST00000622445 UPF2Q9HAU5 1272 aaKnown RBP16.45■□□□□ 0.22
CACNB1-212ENST00000622445 FTSJ3Q8IY81 847 aaKnown RBP16.45■□□□□ 0.22
CACNB1-212ENST00000622445 PLEKHH2Q8IVE3 1493 aa16.44■□□□□ 0.22
CACNB1-212ENST00000622445 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
CACNB1-212ENST00000622445 RALGAPBQ86X10 1494 aa16.44■□□□□ 0.22
CACNB1-212ENST00000622445 TSR2Q969E8 191 aaKnown RBP16.43■□□□□ 0.22
CACNB1-212ENST00000622445 SLFN5Q08AF3 891 aa16.42■□□□□ 0.22
CACNB1-212ENST00000622445 ELL2O00472 640 aaPredicted RBP16.42■□□□□ 0.22
CACNB1-212ENST00000622445 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
CACNB1-212ENST00000622445 RAPGEF6Q8TEU7 1601 aa16.41■□□□□ 0.22
CACNB1-212ENST00000622445 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
CACNB1-212ENST00000622445 SPAG9O60271 1321 aaKnown RBP16.41■□□□□ 0.22
CACNB1-212ENST00000622445 USP35Q9P2H5 1018 aa16.41■□□□□ 0.22
CACNB1-212ENST00000622445 KDM5CP41229 1560 aa16.4■□□□□ 0.22
CACNB1-212ENST00000622445 AMER1Q5JTC6 1135 aaPredicted RBP16.4■□□□□ 0.22
CACNB1-212ENST00000622445 CDCA8Q53HL2 280 aa16.4■□□□□ 0.22
CACNB1-212ENST00000622445 ATP10BO94823 1461 aa16.4■□□□□ 0.22
CACNB1-212ENST00000622445 PRAG1Q86YV5 1406 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms