RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 A2MP01023 1474 aa17.21■□□□□ 0.35
SCAMP1-207ENST00000621999 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
SCAMP1-207ENST00000621999 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
SCAMP1-207ENST00000621999 NEO1Q92859 1461 aa17.18■□□□□ 0.34
SCAMP1-207ENST00000621999 DNMT1P26358 1616 aaKnown RBP17.18■□□□□ 0.34
SCAMP1-207ENST00000621999 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
SCAMP1-207ENST00000621999 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
SCAMP1-207ENST00000621999 LRRIQ1Q96JM4 1722 aa17.17■□□□□ 0.34
SCAMP1-207ENST00000621999 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
SCAMP1-207ENST00000621999 SAMD9LQ8IVG5 1584 aa17.16■□□□□ 0.34
SCAMP1-207ENST00000621999 DUOX2Q9NRD8 1548 aa17.15■□□□□ 0.34
SCAMP1-207ENST00000621999 RTEL1-TNFRSF6BF6WH68 1400 aa17.14■□□□□ 0.33
SCAMP1-207ENST00000621999 SLC52A1Q9NWF4 448 aa17.14■□□□□ 0.33
SCAMP1-207ENST00000621999 SHANK2Q9UPX8 1470 aa17.13■□□□□ 0.33
SCAMP1-207ENST00000621999 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
SCAMP1-207ENST00000621999 TMF1P82094 1093 aa17.12■□□□□ 0.33
SCAMP1-207ENST00000621999 CDCA8Q53HL2 280 aa17.12■□□□□ 0.33
SCAMP1-207ENST00000621999 PREX2Q70Z35 1606 aa17.12■□□□□ 0.33
SCAMP1-207ENST00000621999 SRPK2P78362 688 aaKnown RBP17.11■□□□□ 0.33
SCAMP1-207ENST00000621999 YEATS2Q9ULM3 1422 aa17.11■□□□□ 0.33
SCAMP1-207ENST00000621999 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
SCAMP1-207ENST00000621999 ANKRD30BQ9BXX2 1392 aa17.11■□□□□ 0.33
SCAMP1-207ENST00000621999 CDC42BPAQ5VT25 1732 aa17.11■□□□□ 0.33
SCAMP1-207ENST00000621999 ERBINQ96RT1 1412 aa17.11■□□□□ 0.33
SCAMP1-207ENST00000621999 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
SCAMP1-207ENST00000621999 IDI1Q13907 227 aa17.11■□□□□ 0.33
SCAMP1-207ENST00000621999 ST20-MTHFSA0A0A6YYL1 179 aa17.1■□□□□ 0.33
SCAMP1-207ENST00000621999 TMEM132EQ6IEE7 984 aa17.1■□□□□ 0.33
SCAMP1-207ENST00000621999 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
SCAMP1-207ENST00000621999 TXNDC2Q86VQ3 553 aa17.09■□□□□ 0.33
SCAMP1-207ENST00000621999 ABCC1P33527 1531 aa17.07■□□□□ 0.32
SCAMP1-207ENST00000621999 NBPF8Q3BBV2 869 aa17.07■□□□□ 0.32
SCAMP1-207ENST00000621999 ADGRL2O95490 1459 aa17.06■□□□□ 0.32
SCAMP1-207ENST00000621999 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
SCAMP1-207ENST00000621999 ATP10AO60312 1499 aa17.06■□□□□ 0.32
SCAMP1-207ENST00000621999 NBPF1Q3BBV0 1214 aa17.06■□□□□ 0.32
SCAMP1-207ENST00000621999 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.06■□□□□ 0.32
SCAMP1-207ENST00000621999 NUTM2FA1L443 756 aa17.05■□□□□ 0.32
SCAMP1-207ENST00000621999 MIER1Q8N108 512 aa17.05■□□□□ 0.32
SCAMP1-207ENST00000621999 THEMISQ8N1K5 641 aaPredicted RBP17.05■□□□□ 0.32
SCAMP1-207ENST00000621999 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
SCAMP1-207ENST00000621999 ARHGEF5Q12774 1597 aa17.05■□□□□ 0.32
SCAMP1-207ENST00000621999 KNSTRNQ9Y448 316 aa17.03■□□□□ 0.32
SCAMP1-207ENST00000621999 CFAP74Q9C0B2 1584 aa17.03■□□□□ 0.32
SCAMP1-207ENST00000621999 ABCA9Q8IUA7 1624 aa17.02■□□□□ 0.32
SCAMP1-207ENST00000621999 CDC42BPBQ9Y5S2 1711 aa17.02■□□□□ 0.32
SCAMP1-207ENST00000621999 FAM135AQ9P2D6 1515 aa17.02■□□□□ 0.31
SCAMP1-207ENST00000621999 STAC3Q96MF2 364 aa17.01■□□□□ 0.31
SCAMP1-207ENST00000621999 SLC26A8Q96RN1 970 aa17.01■□□□□ 0.31
SCAMP1-207ENST00000621999 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
SCAMP1-207ENST00000621999 AEBP2Q6ZN18 517 aaPredicted RBP17.01■□□□□ 0.31
SCAMP1-207ENST00000621999 USP47Q96K76 1375 aa17.01■□□□□ 0.31
SCAMP1-207ENST00000621999 LMOD2Q6P5Q4 547 aa17■□□□□ 0.31
SCAMP1-207ENST00000621999 FAM9BQ8IZU0 186 aa17■□□□□ 0.31
SCAMP1-207ENST00000621999 ZFYVE16Q7Z3T8 1539 aa16.99■□□□□ 0.31
SCAMP1-207ENST00000621999 EIF3AQ14152 1382 aaKnown RBP16.99■□□□□ 0.31
SCAMP1-207ENST00000621999 MINK1Q8N4C8 1332 aaPredicted RBP16.99■□□□□ 0.31
SCAMP1-207ENST00000621999 MLH3Q9UHC1 1453 aa16.97■□□□□ 0.31
SCAMP1-207ENST00000621999 TNNT2P45379 298 aaPredicted RBP16.97■□□□□ 0.31
SCAMP1-207ENST00000621999 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
SCAMP1-207ENST00000621999 CFAP65Q6ZU64 1925 aaKnown RBP16.97■□□□□ 0.31
SCAMP1-207ENST00000621999 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
SCAMP1-207ENST00000621999 ARAP3Q8WWN8 1544 aa16.97■□□□□ 0.31
SCAMP1-207ENST00000621999 ZMYM3Q14202 1370 aa16.97■□□□□ 0.31
SCAMP1-207ENST00000621999 MRS2Q9HD23 443 aa16.97■□□□□ 0.31
SCAMP1-207ENST00000621999 PZPP20742 1482 aa16.96■□□□□ 0.31
SCAMP1-207ENST00000621999 ANKLE2Q86XL3 938 aa16.95■□□□□ 0.3
SCAMP1-207ENST00000621999 KDM6BO15054 1643 aa16.94■□□□□ 0.3
SCAMP1-207ENST00000621999 ADGRF5Q8IZF2 1346 aa16.94■□□□□ 0.3
SCAMP1-207ENST00000621999 PPM1GO15355 546 aaPredicted RBP16.93■□□□□ 0.3
SCAMP1-207ENST00000621999 TNRQ92752 1358 aa16.93■□□□□ 0.3
SCAMP1-207ENST00000621999 RPGRIP1LQ68CZ1 1315 aa16.93■□□□□ 0.3
SCAMP1-207ENST00000621999 RPRD2Q5VT52 1461 aaKnown RBP16.93■□□□□ 0.3
SCAMP1-207ENST00000621999 ADGBQ8N7X0 1667 aa16.92■□□□□ 0.3
SCAMP1-207ENST00000621999 SALL2Q9Y467 1007 aaPredicted RBP16.92■□□□□ 0.3
SCAMP1-207ENST00000621999 SOX12O15370 315 aa16.91■□□□□ 0.3
SCAMP1-207ENST00000621999 CENPJQ9HC77 1338 aaPredicted RBP16.91■□□□□ 0.3
SCAMP1-207ENST00000621999 HECW2Q9P2P5 1572 aa16.91■□□□□ 0.3
SCAMP1-207ENST00000621999 DIP2BQ9P265 1576 aa16.9■□□□□ 0.3
SCAMP1-207ENST00000621999 MAGI2Q86UL8 1455 aa16.9■□□□□ 0.3
SCAMP1-207ENST00000621999 NEFMP07197 916 aa16.89■□□□□ 0.3
SCAMP1-207ENST00000621999 SENP3-EIF4A1A0A087X0R7 540 aa16.89■□□□□ 0.29
SCAMP1-207ENST00000621999 NOS1P29475 1434 aa16.87■□□□□ 0.29
SCAMP1-207ENST00000621999 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
SCAMP1-207ENST00000621999 PRAM1Q96QH2 718 aa16.87■□□□□ 0.29
SCAMP1-207ENST00000621999 NEFLP07196 543 aa16.87■□□□□ 0.29
SCAMP1-207ENST00000621999 HDGFL2Q7Z4V5 671 aaPredicted RBP16.87■□□□□ 0.29
SCAMP1-207ENST00000621999 HAP1P54257 671 aaPredicted RBP16.87■□□□□ 0.29
SCAMP1-207ENST00000621999 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
SCAMP1-207ENST00000621999 GCC2Q8IWJ2 1684 aa16.86■□□□□ 0.29
SCAMP1-207ENST00000621999 NGDNQ8NEJ9 315 aaKnown RBP16.85■□□□□ 0.29
SCAMP1-207ENST00000621999 WDR43Q15061 677 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCAMP1-207ENST00000621999 HNRNPUQ00839 825 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCAMP1-207ENST00000621999 PANK3Q9H999 370 aa16.84■□□□□ 0.29
SCAMP1-207ENST00000621999 NPATQ14207 1427 aa16.83■□□□□ 0.28
SCAMP1-207ENST00000621999 CABP2Q9NPB3 220 aa16.83■□□□□ 0.28
SCAMP1-207ENST00000621999 HSPA2P54652 639 aa16.83■□□□□ 0.28
SCAMP1-207ENST00000621999 MAST1Q9Y2H9 1570 aa16.82■□□□□ 0.28
SCAMP1-207ENST00000621999 GLI2P10070 1586 aa16.82■□□□□ 0.28
SCAMP1-207ENST00000621999 TERF2IPQ9NYB0 399 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms