RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 LMOD2Q6P5Q4 547 aa11.92□□□□□ -0.5
GGA3-222ENST00000621217 ADAMTS12P58397 1594 aa11.92□□□□□ -0.5
GGA3-222ENST00000621217 ATP10BO94823 1461 aa11.91□□□□□ -0.5
GGA3-222ENST00000621217 CNTLNQ9NXG0 1405 aa11.91□□□□□ -0.5
GGA3-222ENST00000621217 CAMSAP2Q08AD1 1489 aa11.91□□□□□ -0.5
GGA3-222ENST00000621217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.91□□□□□ -0.5
GGA3-222ENST00000621217 CFAP70Q5T0N1 1121 aa11.91□□□□□ -0.5
GGA3-222ENST00000621217 CTTNBP2Q8WZ74 1663 aa11.9□□□□□ -0.5
GGA3-222ENST00000621217 DEKP35659 375 aaKnown RBP11.9□□□□□ -0.5
GGA3-222ENST00000621217 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
GGA3-222ENST00000621217 NUDCQ9Y266 331 aa11.9□□□□□ -0.5
GGA3-222ENST00000621217 KTN1Q86UP2 1357 aaKnown RBP11.89□□□□□ -0.51
GGA3-222ENST00000621217 RGS3P49796 1198 aa11.89□□□□□ -0.51
GGA3-222ENST00000621217 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
GGA3-222ENST00000621217 ABCA5Q8WWZ7 1642 aa11.89□□□□□ -0.51
GGA3-222ENST00000621217 RCAN3Q9UKA8 241 aa11.88□□□□□ -0.51
GGA3-222ENST00000621217 GPATCH8Q9UKJ3 1502 aaKnown RBP11.88□□□□□ -0.51
GGA3-222ENST00000621217 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
GGA3-222ENST00000621217 DISP1Q96F81 1524 aa11.88□□□□□ -0.51
GGA3-222ENST00000621217 NCOA1Q15788 1441 aa11.88□□□□□ -0.51
GGA3-222ENST00000621217 ZBED9Q6R2W3 1325 aa11.87□□□□□ -0.51
GGA3-222ENST00000621217 MORC1Q86VD1 984 aa11.87□□□□□ -0.51
GGA3-222ENST00000621217 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
GGA3-222ENST00000621217 WDR62O43379 1518 aa11.87□□□□□ -0.51
GGA3-222ENST00000621217 FRAT1Q92837 279 aaPredicted RBP11.87□□□□□ -0.51
GGA3-222ENST00000621217 ANKRD30BQ9BXX2 1392 aa11.87□□□□□ -0.51
GGA3-222ENST00000621217 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
GGA3-222ENST00000621217 NLRP13Q86W25 1043 aa11.85□□□□□ -0.51
GGA3-222ENST00000621217 KIAA1107Q9UPP5 1409 aa11.85□□□□□ -0.51
GGA3-222ENST00000621217 RALBP1Q15311 655 aa11.85□□□□□ -0.51
GGA3-222ENST00000621217 EXOC6Q8TAG9 804 aa11.84□□□□□ -0.51
GGA3-222ENST00000621217 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
GGA3-222ENST00000621217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.84□□□□□ -0.51
GGA3-222ENST00000621217 CDCA7LQ96GN5 454 aa11.84□□□□□ -0.51
GGA3-222ENST00000621217 ERICH6BQ5W0A0 696 aa11.84□□□□□ -0.51
GGA3-222ENST00000621217 RAPGEF6Q8TEU7 1601 aa11.84□□□□□ -0.51
GGA3-222ENST00000621217 KIAA0556O60303 1618 aa11.83□□□□□ -0.51
GGA3-222ENST00000621217 AKNAQ7Z591 1439 aa11.83□□□□□ -0.51
GGA3-222ENST00000621217 MYBBP1AQ9BQG0 1328 aaKnown RBP11.83□□□□□ -0.52
GGA3-222ENST00000621217 MAGI3Q5TCQ9 1506 aa11.83□□□□□ -0.52
GGA3-222ENST00000621217 ANP32BQ92688 251 aaKnown RBP11.82□□□□□ -0.52
GGA3-222ENST00000621217 UGGT2Q9NYU1 1516 aa11.82□□□□□ -0.52
GGA3-222ENST00000621217 CFAP43Q8NDM7 1665 aa11.82□□□□□ -0.52
GGA3-222ENST00000621217 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
GGA3-222ENST00000621217 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.82□□□□□ -0.52
GGA3-222ENST00000621217 CFAP53Q96M91 514 aa11.82□□□□□ -0.52
GGA3-222ENST00000621217 RRP7AQ9Y3A4 280 aaKnown RBP11.81□□□□□ -0.52
GGA3-222ENST00000621217 NOP58Q9Y2X3 529 aaKnown RBP11.8□□□□□ -0.52
GGA3-222ENST00000621217 CEP170Q5SW79 1584 aa11.8□□□□□ -0.52
GGA3-222ENST00000621217 ARXQ96QS3 562 aa11.8□□□□□ -0.52
GGA3-222ENST00000621217 U2AF1L5P0DN76 240 aaPredicted RBP11.79□□□□□ -0.52
GGA3-222ENST00000621217 U2AF1Q01081 240 aaKnown RBP eCLIP11.79□□□□□ -0.52
GGA3-222ENST00000621217 CCDC141Q6ZP82 1450 aa11.79□□□□□ -0.52
GGA3-222ENST00000621217 KIF14Q15058 1648 aa11.79□□□□□ -0.52
GGA3-222ENST00000621217 ROCK1Q13464 1354 aa11.79□□□□□ -0.52
GGA3-222ENST00000621217 CD109Q6YHK3 1445 aa11.79□□□□□ -0.52
GGA3-222ENST00000621217 NUP160Q12769 1436 aa11.78□□□□□ -0.52
GGA3-222ENST00000621217 VGFO15240 615 aaPredicted RBP11.78□□□□□ -0.52
GGA3-222ENST00000621217 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
GGA3-222ENST00000621217 CABP2Q9NPB3 220 aa11.78□□□□□ -0.52
GGA3-222ENST00000621217 A0A0G2JS52 829 aa11.77□□□□□ -0.52
GGA3-222ENST00000621217 FBXO31Q5XUX0 539 aaPredicted RBP11.77□□□□□ -0.52
GGA3-222ENST00000621217 PNISRQ8TF01 805 aaKnown RBP11.77□□□□□ -0.52
GGA3-222ENST00000621217 RPRD2Q5VT52 1461 aaKnown RBP11.75□□□□□ -0.53
GGA3-222ENST00000621217 MAPK8IP3Q9UPT6 1336 aa11.75□□□□□ -0.53
GGA3-222ENST00000621217 SKAP1Q86WV1 359 aa11.75□□□□□ -0.53
GGA3-222ENST00000621217 RRP1P56182 461 aaKnown RBP11.75□□□□□ -0.53
GGA3-222ENST00000621217 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
GGA3-222ENST00000621217 ADGRL1O94910 1474 aa11.75□□□□□ -0.53
GGA3-222ENST00000621217 SLC12A5Q9H2X9 1139 aa11.75□□□□□ -0.53
GGA3-222ENST00000621217 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
GGA3-222ENST00000621217 TRAPPC8Q9Y2L5 1435 aa11.74□□□□□ -0.53
GGA3-222ENST00000621217 APAF1O14727 1248 aa11.74□□□□□ -0.53
GGA3-222ENST00000621217 CLUAP1Q96AJ1 413 aa11.74□□□□□ -0.53
GGA3-222ENST00000621217 CRBNQ96SW2 442 aa11.74□□□□□ -0.53
GGA3-222ENST00000621217 FANCAO15360 1455 aa11.73□□□□□ -0.53
GGA3-222ENST00000621217 SAMD9Q5K651 1589 aa11.73□□□□□ -0.53
GGA3-222ENST00000621217 SYCP2Q9BX26 1530 aa11.73□□□□□ -0.53
GGA3-222ENST00000621217 HDGFL2Q7Z4V5 671 aaPredicted RBP11.73□□□□□ -0.53
GGA3-222ENST00000621217 KDM6BO15054 1643 aa11.73□□□□□ -0.53
GGA3-222ENST00000621217 CENPJQ9HC77 1338 aaPredicted RBP11.73□□□□□ -0.53
GGA3-222ENST00000621217 CEBPAP49715 358 aaPredicted RBP11.72□□□□□ -0.53
GGA3-222ENST00000621217 ASXL2Q76L83 1435 aa11.72□□□□□ -0.53
GGA3-222ENST00000621217 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
GGA3-222ENST00000621217 HDGFP51858 240 aaKnown RBP11.72□□□□□ -0.53
GGA3-222ENST00000621217 DDRGK1Q96HY6 314 aa11.72□□□□□ -0.53
GGA3-222ENST00000621217 GGNBP2Q9H3C7 697 aa11.72□□□□□ -0.53
GGA3-222ENST00000621217 EIF3AQ14152 1382 aaKnown RBP11.72□□□□□ -0.53
GGA3-222ENST00000621217 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
GGA3-222ENST00000621217 ADGRF5Q8IZF2 1346 aa11.71□□□□□ -0.53
GGA3-222ENST00000621217 SLC4A3P48751 1232 aa11.71□□□□□ -0.53
GGA3-222ENST00000621217 SLC26A8Q96RN1 970 aa11.7□□□□□ -0.54
GGA3-222ENST00000621217 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
GGA3-222ENST00000621217 LTV1Q96GA3 475 aaPredicted RBP11.7□□□□□ -0.54
GGA3-222ENST00000621217 EID1Q9Y6B2 187 aa11.7□□□□□ -0.54
GGA3-222ENST00000621217 IDI1Q13907 227 aa11.69□□□□□ -0.54
GGA3-222ENST00000621217 TXNDC2Q86VQ3 553 aa11.69□□□□□ -0.54
GGA3-222ENST00000621217 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
GGA3-222ENST00000621217 NAP1L5Q96NT1 182 aaPredicted RBP11.68□□□□□ -0.54
GGA3-222ENST00000621217 PRAM1Q96QH2 718 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms