RNA–Protein interactions for RNA: ENST00000621013.4

SLC39A1-211, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC39A1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-211ENST00000621013 FBLN2P98095 1184 aa23.57■■□□□ 1.36
SLC39A1-211ENST00000621013 CCDC141Q6ZP82 1450 aa23.55■■□□□ 1.36
SLC39A1-211ENST00000621013 FAM135AQ9P2D6 1515 aa23.55■■□□□ 1.36
SLC39A1-211ENST00000621013 CNGB1Q14028 1251 aaPredicted RBP23.54■■□□□ 1.36
SLC39A1-211ENST00000621013 DCAF11Q8TEB1 546 aa23.54■■□□□ 1.36
SLC39A1-211ENST00000621013 BCL11AQ9H165 835 aa23.54■■□□□ 1.36
SLC39A1-211ENST00000621013 CCDC136Q96JN2 1154 aa23.53■■□□□ 1.36
SLC39A1-211ENST00000621013 MYT1LQ9UL68 1186 aa23.53■■□□□ 1.36
SLC39A1-211ENST00000621013 SAMD9LQ8IVG5 1584 aa23.52■■□□□ 1.36
SLC39A1-211ENST00000621013 TRPM1Q7Z4N2 1603 aa23.52■■□□□ 1.36
SLC39A1-211ENST00000621013 RSPH4AQ5TD94 716 aa23.51■■□□□ 1.35
SLC39A1-211ENST00000621013 KDM2AQ9Y2K7 1162 aa23.51■■□□□ 1.35
SLC39A1-211ENST00000621013 PREX2Q70Z35 1606 aa23.51■■□□□ 1.35
SLC39A1-211ENST00000621013 HNRNPMP52272 730 aaKnown RBP eCLIP23.51■■□□□ 1.35
SLC39A1-211ENST00000621013 PRAG1Q86YV5 1406 aa23.51■■□□□ 1.35
SLC39A1-211ENST00000621013 CDC42BPBQ9Y5S2 1711 aa23.48■■□□□ 1.35
SLC39A1-211ENST00000621013 PARD3Q8TEW0 1356 aa23.48■■□□□ 1.35
SLC39A1-211ENST00000621013 MAST1Q9Y2H9 1570 aa23.48■■□□□ 1.35
SLC39A1-211ENST00000621013 GPRASP1Q5JY77 1395 aa23.47■■□□□ 1.35
SLC39A1-211ENST00000621013 LAMC1P11047 1609 aa23.47■■□□□ 1.35
SLC39A1-211ENST00000621013 UNC13BO14795 1591 aa23.47■■□□□ 1.35
SLC39A1-211ENST00000621013 CCDC144AA2RUR9 1427 aa23.46■■□□□ 1.35
SLC39A1-211ENST00000621013 NLRP13Q86W25 1043 aa23.44■■□□□ 1.34
SLC39A1-211ENST00000621013 NOP58Q9Y2X3 529 aaKnown RBP23.43■■□□□ 1.34
SLC39A1-211ENST00000621013 INSRP06213 1382 aa23.42■■□□□ 1.34
SLC39A1-211ENST00000621013 PDE3BQ13370 1112 aa23.41■■□□□ 1.34
SLC39A1-211ENST00000621013 PLA2R1Q13018 1463 aa23.41■■□□□ 1.34
SLC39A1-211ENST00000621013 RRP1P56182 461 aaKnown RBP23.41■■□□□ 1.34
SLC39A1-211ENST00000621013 WASHC2CQ9Y4E1 1318 aa23.4■■□□□ 1.34
SLC39A1-211ENST00000621013 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
SLC39A1-211ENST00000621013 PRDM15P57071 1507 aaPredicted RBP23.4■■□□□ 1.34
SLC39A1-211ENST00000621013 ZMYM4Q5VZL5 1548 aa23.4■■□□□ 1.34
SLC39A1-211ENST00000621013 A2MP01023 1474 aa23.39■■□□□ 1.33
SLC39A1-211ENST00000621013 PER1O15534 1290 aaPredicted RBP23.38■■□□□ 1.33
SLC39A1-211ENST00000621013 SYCP2Q9BX26 1530 aa23.38■■□□□ 1.33
SLC39A1-211ENST00000621013 PLXNC1O60486 1568 aa23.38■■□□□ 1.33
SLC39A1-211ENST00000621013 IQGAP3Q86VI3 1631 aa23.38■■□□□ 1.33
SLC39A1-211ENST00000621013 EIF2AK4Q9P2K8 1649 aaKnown RBP23.37■■□□□ 1.33
SLC39A1-211ENST00000621013 SENP3-EIF4A1A0A087X0R7 540 aa23.35■■□□□ 1.33
SLC39A1-211ENST00000621013 ATP10AO60312 1499 aa23.35■■□□□ 1.33
SLC39A1-211ENST00000621013 RCAN3Q9UKA8 241 aa23.34■■□□□ 1.33
SLC39A1-211ENST00000621013 ANP32AP39687 249 aaKnown RBP23.34■■□□□ 1.33
SLC39A1-211ENST00000621013 NBPF1Q3BBV0 1214 aa23.33■■□□□ 1.33
SLC39A1-211ENST00000621013 TTC37Q6PGP7 1564 aa23.32■■□□□ 1.32
SLC39A1-211ENST00000621013 IPO9Q96P70 1041 aaKnown RBP23.32■■□□□ 1.32
SLC39A1-211ENST00000621013 PLEKHH2Q8IVE3 1493 aa23.32■■□□□ 1.32
SLC39A1-211ENST00000621013 ARHGAP5Q13017 1502 aa23.32■■□□□ 1.32
SLC39A1-211ENST00000621013 TESK2Q96S53 571 aa23.32■■□□□ 1.32
SLC39A1-211ENST00000621013 MAGI2Q86UL8 1455 aa23.31■■□□□ 1.32
SLC39A1-211ENST00000621013 BLMP54132 1417 aaPredicted RBP23.31■■□□□ 1.32
SLC39A1-211ENST00000621013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.3■■□□□ 1.326e-6■■■■□ 21.5
SLC39A1-211ENST00000621013 MYO5CQ9NQX4 1742 aa23.3■■□□□ 1.32
SLC39A1-211ENST00000621013 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
SLC39A1-211ENST00000621013 DISP3Q9P2K9 1392 aa23.29■■□□□ 1.32
SLC39A1-211ENST00000621013 ERBINQ96RT1 1412 aa23.29■■□□□ 1.32
SLC39A1-211ENST00000621013 DUOX2Q9NRD8 1548 aa23.28■■□□□ 1.32
SLC39A1-211ENST00000621013 RGL3Q3MIN7 710 aa23.28■■□□□ 1.32
SLC39A1-211ENST00000621013 EXOC6Q8TAG9 804 aa23.28■■□□□ 1.32
SLC39A1-211ENST00000621013 TCERG1O14776 1098 aaKnown RBP23.26■■□□□ 1.31
SLC39A1-211ENST00000621013 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
SLC39A1-211ENST00000621013 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
SLC39A1-211ENST00000621013 TMF1P82094 1093 aa23.23■■□□□ 1.31
SLC39A1-211ENST00000621013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.22■■□□□ 1.31
SLC39A1-211ENST00000621013 PANK3Q9H999 370 aa23.21■■□□□ 1.31
SLC39A1-211ENST00000621013 ZBTB47Q9UFB7 747 aaPredicted RBP23.2■■□□□ 1.3
SLC39A1-211ENST00000621013 ABCC2Q92887 1545 aa23.2■■□□□ 1.3
SLC39A1-211ENST00000621013 MS4A1P11836 297 aa23.2■■□□□ 1.3
SLC39A1-211ENST00000621013 DEKP35659 375 aaKnown RBP23.2■■□□□ 1.3
SLC39A1-211ENST00000621013 SALL2Q9Y467 1007 aaPredicted RBP23.19■■□□□ 1.3
SLC39A1-211ENST00000621013 CC2D1BQ5T0F9 858 aaKnown RBP23.19■■□□□ 1.3
SLC39A1-211ENST00000621013 CDCA7LQ96GN5 454 aa23.19■■□□□ 1.3
SLC39A1-211ENST00000621013 CHD1O14646 1710 aa23.15■■□□□ 1.3
SLC39A1-211ENST00000621013 PLCH2O75038 1416 aa23.13■■□□□ 1.29
SLC39A1-211ENST00000621013 WDR7Q9Y4E6 1490 aa23.13■■□□□ 1.29
SLC39A1-211ENST00000621013 MADDQ8WXG6 1647 aa23.13■■□□□ 1.29
SLC39A1-211ENST00000621013 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
SLC39A1-211ENST00000621013 PDE4AP27815 886 aa23.13■■□□□ 1.29
SLC39A1-211ENST00000621013 NBR1Q14596 966 aa23.13■■□□□ 1.29
SLC39A1-211ENST00000621013 BACH2Q9BYV9 841 aa23.11■■□□□ 1.29
SLC39A1-211ENST00000621013 ABCC1P33527 1531 aa23.1■■□□□ 1.29
SLC39A1-211ENST00000621013 STAC3Q96MF2 364 aa23.08■■□□□ 1.29
SLC39A1-211ENST00000621013 SYNMO15061 1565 aa23.08■■□□□ 1.29
SLC39A1-211ENST00000621013 TRPM2O94759 1503 aa23.08■■□□□ 1.28
SLC39A1-211ENST00000621013 SCAPERQ9BY12 1400 aa23.07■■□□□ 1.28
SLC39A1-211ENST00000621013 EFCAB2Q5VUJ9 269 aa23.06■■□□□ 1.28
SLC39A1-211ENST00000621013 SPHKAPQ2M3C7 1700 aa23.06■■□□□ 1.28
SLC39A1-211ENST00000621013 CRBNQ96SW2 442 aa23.05■■□□□ 1.28
SLC39A1-211ENST00000621013 ADAMTS8Q9UP79 889 aa23.05■■□□□ 1.28
SLC39A1-211ENST00000621013 PLIN1O60240 522 aa23.04■■□□□ 1.28
SLC39A1-211ENST00000621013 CDCA8Q53HL2 280 aa23.04■■□□□ 1.28
SLC39A1-211ENST00000621013 SCAF11Q99590 1463 aaKnown RBP23.04■■□□□ 1.28
SLC39A1-211ENST00000621013 ERCC6L2Q5T890 1561 aa23.04■■□□□ 1.28
SLC39A1-211ENST00000621013 CLASP1Q7Z460 1538 aa23.04■■□□□ 1.28
SLC39A1-211ENST00000621013 PPP2R1AP30153 589 aa23.04■■□□□ 1.28
SLC39A1-211ENST00000621013 PTPRTO14522 1441 aa23.04■■□□□ 1.28
SLC39A1-211ENST00000621013 CEP152O94986 1710 aa23.03■■□□□ 1.28
SLC39A1-211ENST00000621013 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
SLC39A1-211ENST00000621013 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
SLC39A1-211ENST00000621013 RTEL1-TNFRSF6BF6WH68 1400 aa23.03■■□□□ 1.28
SLC39A1-211ENST00000621013 AMER1Q5JTC6 1135 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms