RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 SYAP1Q96A49 352 aaPredicted RBP3.87□□□□□ -1.79
NEB-220ENST00000618972 DDX54Q8TDD1 881 aaKnown RBP3.87□□□□□ -1.79
NEB-220ENST00000618972 ISY1Q9ULR0 285 aaKnown RBP3.87□□□□□ -1.79
NEB-220ENST00000618972 CCNB3Q8WWL7 1395 aa3.87□□□□□ -1.79
NEB-220ENST00000618972 TPM3P06753 285 aa3.86□□□□□ -1.79
NEB-220ENST00000618972 MIS18AQ9NYP9 233 aa3.86□□□□□ -1.79
NEB-220ENST00000618972 SETD5Q9C0A6 1442 aa3.86□□□□□ -1.79
NEB-220ENST00000618972 TUBB4BP68371 445 aa3.86□□□□□ -1.79
NEB-220ENST00000618972 CFDP1Q9UEE9 299 aaPredicted RBP3.86□□□□□ -1.79
NEB-220ENST00000618972 CALD1Q05682 793 aaKnown RBP3.86□□□□□ -1.79
NEB-220ENST00000618972 AEBP2Q6ZN18 517 aaPredicted RBP3.86□□□□□ -1.79
NEB-220ENST00000618972 PHLDB1Q86UU1 1377 aa3.86□□□□□ -1.79
NEB-220ENST00000618972 ZMYND15Q9H091 742 aa3.86□□□□□ -1.79
NEB-220ENST00000618972 GAS2L3Q86XJ1 694 aa3.86□□□□□ -1.79
NEB-220ENST00000618972 HDAC5Q9UQL6 1122 aa3.86□□□□□ -1.79
NEB-220ENST00000618972 CANXP27824 592 aaKnown RBP3.85□□□□□ -1.79
NEB-220ENST00000618972 DHX37Q8IY37 1157 aaKnown RBP3.85□□□□□ -1.79
NEB-220ENST00000618972 IGSF3O75054 1194 aa3.85□□□□□ -1.79
NEB-220ENST00000618972 TDRD9Q8NDG6 1382 aaKnown RBP3.85□□□□□ -1.79
NEB-220ENST00000618972 TSPYL1Q9H0U9 437 aa3.85□□□□□ -1.79
NEB-220ENST00000618972 MFAP1P55081 439 aaKnown RBP3.85□□□□□ -1.79
NEB-220ENST00000618972 NGEFQ8N5V2 710 aa3.85□□□□□ -1.79
NEB-220ENST00000618972 PAXIP1Q6ZW49 1069 aaPredicted RBP3.85□□□□□ -1.79
NEB-220ENST00000618972 GBP4Q96PP9 640 aa3.85□□□□□ -1.79
NEB-220ENST00000618972 CCDC34Q96HJ3 373 aa3.85□□□□□ -1.79
NEB-220ENST00000618972 ZRANB1Q9UGI0 708 aa3.85□□□□□ -1.79
NEB-220ENST00000618972 CARMIL1Q5VZK9 1371 aa3.85□□□□□ -1.79
NEB-220ENST00000618972 HMGN5P82970 282 aaKnown RBP3.85□□□□□ -1.79
NEB-220ENST00000618972 FAM43AQ8N2R8 423 aa3.85□□□□□ -1.79
NEB-220ENST00000618972 CAVIN1Q6NZI2 390 aaKnown RBP3.85□□□□□ -1.79
NEB-220ENST00000618972 ZNF830Q96NB3 372 aaPredicted RBP3.84□□□□□ -1.79
NEB-220ENST00000618972 CDCA8Q53HL2 280 aa3.84□□□□□ -1.79
NEB-220ENST00000618972 CWC15Q9P013 229 aaKnown RBP3.84□□□□□ -1.79
NEB-220ENST00000618972 SLFN5Q08AF3 891 aa3.84□□□□□ -1.79
NEB-220ENST00000618972 PER1O15534 1290 aaPredicted RBP3.84□□□□□ -1.79
NEB-220ENST00000618972 C17orf53Q8N3J3 647 aaPredicted RBP3.84□□□□□ -1.79
NEB-220ENST00000618972 CCDC66A2RUB6 948 aa3.84□□□□□ -1.79
NEB-220ENST00000618972 ZNF526Q8TF50 670 aaPredicted RBP3.84□□□□□ -1.79
NEB-220ENST00000618972 SMARCA5O60264 1052 aaPredicted RBP3.84□□□□□ -1.8
NEB-220ENST00000618972 PPP2R1AP30153 589 aa3.84□□□□□ -1.8
NEB-220ENST00000618972 AQRO60306 1485 aaKnown RBP eCLIP3.84□□□□□ -1.8
NEB-220ENST00000618972 C1orf115Q9H7X2 142 aa3.84□□□□□ -1.8
NEB-220ENST00000618972 GOLGA6L4A6NEF3 574 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 CLGNO14967 610 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 IPO8O15397 1037 aaKnown RBP3.83□□□□□ -1.8
NEB-220ENST00000618972 LETM1O95202 739 aaPredicted RBP3.83□□□□□ -1.8
NEB-220ENST00000618972 TPM2P07951 284 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 KNSTRNQ9Y448 316 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 TRAK2O60296 914 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 RBM27Q9P2N5 1060 aaKnown RBP3.83□□□□□ -1.8
NEB-220ENST00000618972 PTPRKQ15262 1439 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 PHF14O94880 888 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 ANKRD45Q5TZF3 282 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 U2SURPO15042 1029 aaKnown RBP3.83□□□□□ -1.8
NEB-220ENST00000618972 VGFO15240 615 aaPredicted RBP3.83□□□□□ -1.8
NEB-220ENST00000618972 MORC1Q86VD1 984 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 AKNAQ7Z591 1439 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 SOX12O15370 315 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 CFAP70Q5T0N1 1121 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 TBC1D2Q9BYX2 928 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 GOLGA2Q08379 1002 aa3.83□□□□□ -1.8
NEB-220ENST00000618972 BRD2P25440 801 aaKnown RBP3.83□□□□□ -1.8
NEB-220ENST00000618972 NOL8Q76FK4 1167 aaKnown RBP3.83□□□□□ -1.8
NEB-220ENST00000618972 DIAPH3Q9NSV4 1193 aa3.82□□□□□ -1.8
NEB-220ENST00000618972 ERCC4Q92889 916 aaPredicted RBP3.82□□□□□ -1.8
NEB-220ENST00000618972 PRDM10Q9NQV6 1147 aa3.82□□□□□ -1.8
NEB-220ENST00000618972 ATP6V1DQ9Y5K8 247 aa3.82□□□□□ -1.8
NEB-220ENST00000618972 RRP12Q5JTH9 1297 aaKnown RBP3.82□□□□□ -1.8
NEB-220ENST00000618972 TRAK1Q9UPV9 953 aa3.82□□□□□ -1.8
NEB-220ENST00000618972 TSR2Q969E8 191 aaKnown RBP3.82□□□□□ -1.8
NEB-220ENST00000618972 LNPKQ9C0E8 428 aa3.82□□□□□ -1.8
NEB-220ENST00000618972 NOB1Q9ULX3 412 aaKnown RBP3.82□□□□□ -1.8
NEB-220ENST00000618972 PES1O00541 588 aaKnown RBP3.82□□□□□ -1.8
NEB-220ENST00000618972 OTUD7AQ8TE49 926 aaPredicted RBP3.82□□□□□ -1.8
NEB-220ENST00000618972 NECTIN2Q92692 538 aa3.82□□□□□ -1.8
NEB-220ENST00000618972 RWDD1Q9H446 243 aaPredicted RBP3.82□□□□□ -1.8
NEB-220ENST00000618972 CCDC7Q96M83 1385 aa3.82□□□□□ -1.8
NEB-220ENST00000618972 WDR43Q15061 677 aaKnown RBP eCLIP3.82□□□□□ -1.8
NEB-220ENST00000618972 NUTM2FA1L443 756 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 U2AF1L5P0DN76 240 aaPredicted RBP3.81□□□□□ -1.8
NEB-220ENST00000618972 U2AF1Q01081 240 aaKnown RBP eCLIP3.81□□□□□ -1.8
NEB-220ENST00000618972 C8orf34Q49A92 452 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.81□□□□□ -1.8
NEB-220ENST00000618972 DRC7Q8IY82 874 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 A6NNZ2 444 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 TUBB8Q3ZCM7 444 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 DEF6Q9H4E7 631 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 CCDC70Q6NSX1 233 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 DUSP27Q5VZP5 1158 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 TPM1P09493 284 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 DCTN1Q14203 1278 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 PLEKHD1A6NEE1 506 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 MCM4P33991 863 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 FAM193AP78312 1265 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 PDE3BQ13370 1112 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 POLR3GO15318 223 aaPredicted RBP3.81□□□□□ -1.8
NEB-220ENST00000618972 USP19O94966 1318 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 MTHFSP49914 203 aa3.81□□□□□ -1.8
NEB-220ENST00000618972 TSR1Q2NL82 804 aaKnown RBP3.81□□□□□ -1.8
NEB-220ENST00000618972 FAM161AQ3B820 660 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms