RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 LETM1O95202 739 aaPredicted RBP9.3□□□□□ -0.92
PDE6A-205ENST00000617647 XPCQ01831 940 aaPredicted RBP9.3□□□□□ -0.92
PDE6A-205ENST00000617647 IGSF3O75054 1194 aa9.29□□□□□ -0.92
PDE6A-205ENST00000617647 KCNJ4P48050 445 aa9.29□□□□□ -0.92
PDE6A-205ENST00000617647 ZFP91Q96JP5 570 aaPredicted RBP9.29□□□□□ -0.92
PDE6A-205ENST00000617647 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
PDE6A-205ENST00000617647 CCDC66A2RUB6 948 aa9.28□□□□□ -0.92
PDE6A-205ENST00000617647 GTPBP4Q9BZE4 634 aaKnown RBP9.28□□□□□ -0.92
PDE6A-205ENST00000617647 TOP2BQ02880 1626 aa9.28□□□□□ -0.92
PDE6A-205ENST00000617647 CCDC94Q9BW85 323 aaPredicted RBP9.28□□□□□ -0.92
PDE6A-205ENST00000617647 PATL2C9JE40 543 aaKnown RBP9.28□□□□□ -0.92
PDE6A-205ENST00000617647 DYNC1I1O14576 645 aa9.28□□□□□ -0.92
PDE6A-205ENST00000617647 OFD1O75665 1012 aa9.28□□□□□ -0.92
PDE6A-205ENST00000617647 KIF20AO95235 890 aa9.28□□□□□ -0.92
PDE6A-205ENST00000617647 RAPGEF2Q9Y4G8 1499 aa9.27□□□□□ -0.92
PDE6A-205ENST00000617647 DMTNQ08495 405 aa9.27□□□□□ -0.93
PDE6A-205ENST00000617647 ISY1Q9ULR0 285 aaKnown RBP9.27□□□□□ -0.93
PDE6A-205ENST00000617647 DDX49Q9Y6V7 483 aaKnown RBP9.27□□□□□ -0.93
PDE6A-205ENST00000617647 SKOR2Q2VWA4 1001 aaPredicted RBP9.27□□□□□ -0.93
PDE6A-205ENST00000617647 SPDYE4A6NLX3 237 aa9.26□□□□□ -0.93
PDE6A-205ENST00000617647 CERS3Q8IU89 383 aa9.26□□□□□ -0.93
PDE6A-205ENST00000617647 MFAP1P55081 439 aaKnown RBP9.25□□□□□ -0.93
PDE6A-205ENST00000617647 PRDM2Q13029 1718 aa9.25□□□□□ -0.93
PDE6A-205ENST00000617647 WDR43Q15061 677 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDE6A-205ENST00000617647 SASS6Q6UVJ0 657 aa9.25□□□□□ -0.93
PDE6A-205ENST00000617647 TRERF1Q96PN7 1200 aa9.25□□□□□ -0.93
PDE6A-205ENST00000617647 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
PDE6A-205ENST00000617647 UTP14CQ5TAP6 766 aaKnown RBP9.24□□□□□ -0.93
PDE6A-205ENST00000617647 CNTLNQ9NXG0 1405 aa9.24□□□□□ -0.93
PDE6A-205ENST00000617647 HMGXB3Q12766 1538 aa9.23□□□□□ -0.93
PDE6A-205ENST00000617647 DNAJC2Q99543 621 aaKnown RBP9.23□□□□□ -0.93
PDE6A-205ENST00000617647 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
PDE6A-205ENST00000617647 ERICH4A6NGS2 130 aa9.22□□□□□ -0.93
PDE6A-205ENST00000617647 ZNF830Q96NB3 372 aaPredicted RBP9.22□□□□□ -0.93
PDE6A-205ENST00000617647 PDE3BQ13370 1112 aa9.22□□□□□ -0.93
PDE6A-205ENST00000617647 P3H3Q8IVL6 736 aa9.22□□□□□ -0.93
PDE6A-205ENST00000617647 PDCL2Q8N4E4 241 aa9.22□□□□□ -0.93
PDE6A-205ENST00000617647 ERBB4Q15303 1308 aa9.21□□□□□ -0.94
PDE6A-205ENST00000617647 KIF27Q86VH2 1401 aa9.21□□□□□ -0.94
PDE6A-205ENST00000617647 HMGN5P82970 282 aaKnown RBP9.21□□□□□ -0.94
PDE6A-205ENST00000617647 RSPH4AQ5TD94 716 aa9.21□□□□□ -0.94
PDE6A-205ENST00000617647 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
PDE6A-205ENST00000617647 RIPK4P57078 832 aa9.2□□□□□ -0.94
PDE6A-205ENST00000617647 CCDC39Q9UFE4 941 aa9.2□□□□□ -0.94
PDE6A-205ENST00000617647 WWC1Q8IX03 1113 aa9.2□□□□□ -0.94
PDE6A-205ENST00000617647 SECISBP2LQ93073 1101 aaKnown RBP9.19□□□□□ -0.94
PDE6A-205ENST00000617647 TRIM6-TRIM34B2RNG4 842 aa9.19□□□□□ -0.94
PDE6A-205ENST00000617647 TRIM34Q9BYJ4 488 aa9.19□□□□□ -0.94
PDE6A-205ENST00000617647 NCAPD3P42695 1498 aa9.19□□□□□ -0.94
PDE6A-205ENST00000617647 CDCA7LQ96GN5 454 aa9.19□□□□□ -0.94
PDE6A-205ENST00000617647 CHIC2Q9UKJ5 165 aa9.19□□□□□ -0.94
PDE6A-205ENST00000617647 MPNDQ8N594 471 aa9.18□□□□□ -0.94
PDE6A-205ENST00000617647 KIF3AQ9Y496 699 aa9.18□□□□□ -0.94
PDE6A-205ENST00000617647 MAPK8IP3Q9UPT6 1336 aa9.18□□□□□ -0.94
PDE6A-205ENST00000617647 TERF1P54274 439 aa9.18□□□□□ -0.94
PDE6A-205ENST00000617647 TIGD1Q96MW7 591 aa9.18□□□□□ -0.94
PDE6A-205ENST00000617647 C8orf34Q49A92 452 aa9.18□□□□□ -0.94
PDE6A-205ENST00000617647 NBPF1Q3BBV0 1214 aa9.17□□□□□ -0.94
PDE6A-205ENST00000617647 CCDC7Q96M83 1385 aa9.17□□□□□ -0.94
PDE6A-205ENST00000617647 FSD2A1L4K1 749 aa9.17□□□□□ -0.94
PDE6A-205ENST00000617647 GOLGA6L6A8MZA4 724 aa9.17□□□□□ -0.94
PDE6A-205ENST00000617647 RNF214Q8ND24 703 aa9.17□□□□□ -0.94
PDE6A-205ENST00000617647 TBC1D2Q9BYX2 928 aa9.17□□□□□ -0.94
PDE6A-205ENST00000617647 TMEM51Q9NW97 253 aa9.16□□□□□ -0.94
PDE6A-205ENST00000617647 PRXQ9BXM0 1461 aa9.16□□□□□ -0.94
PDE6A-205ENST00000617647 CC2D1BQ5T0F9 858 aaKnown RBP9.16□□□□□ -0.94
PDE6A-205ENST00000617647 CAVIN1Q6NZI2 390 aaKnown RBP9.16□□□□□ -0.94
PDE6A-205ENST00000617647 CUX1P39880 1505 aa9.16□□□□□ -0.94
PDE6A-205ENST00000617647 TEX2Q8IWB9 1127 aa9.15□□□□□ -0.94
PDE6A-205ENST00000617647 CUX2O14529 1486 aa9.15□□□□□ -0.94
PDE6A-205ENST00000617647 FAM177BA6PVY3 158 aa9.15□□□□□ -0.94
PDE6A-205ENST00000617647 RRP7BPQ9NSQ0 103 aa9.15□□□□□ -0.94
PDE6A-205ENST00000617647 RNF216Q9NWF9 866 aaPredicted RBP9.15□□□□□ -0.94
PDE6A-205ENST00000617647 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
PDE6A-205ENST00000617647 DIAPH3Q9NSV4 1193 aa9.15□□□□□ -0.95
PDE6A-205ENST00000617647 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.14□□□□□ -0.95
PDE6A-205ENST00000617647 CALCOCO1Q9P1Z2 691 aa9.14□□□□□ -0.95
PDE6A-205ENST00000617647 TULP1O00294 542 aaPredicted RBP9.14□□□□□ -0.95
PDE6A-205ENST00000617647 TSC1Q92574 1164 aa9.14□□□□□ -0.95
PDE6A-205ENST00000617647 ZBTB9Q96C00 473 aa9.14□□□□□ -0.95
PDE6A-205ENST00000617647 C22orf23Q9BZE7 217 aa9.14□□□□□ -0.95
PDE6A-205ENST00000617647 TSPYL1Q9H0U9 437 aa9.14□□□□□ -0.95
PDE6A-205ENST00000617647 ARAP1Q96P48 1450 aa9.14□□□□□ -0.95
PDE6A-205ENST00000617647 GPATCH11Q8N954 259 aa9.13□□□□□ -0.95
PDE6A-205ENST00000617647 C20orf194Q5TEA3 1177 aa9.13□□□□□ -0.95
PDE6A-205ENST00000617647 MCTP1Q6DN14 999 aa9.13□□□□□ -0.95
PDE6A-205ENST00000617647 CFTRP13569 1480 aa9.13□□□□□ -0.95
PDE6A-205ENST00000617647 FHAD1B1AJZ9 1412 aa9.13□□□□□ -0.95
PDE6A-205ENST00000617647 RNF123Q5XPI4 1314 aa9.13□□□□□ -0.95
PDE6A-205ENST00000617647 KIF7Q2M1P5 1343 aa9.12□□□□□ -0.95
PDE6A-205ENST00000617647 CLGNO14967 610 aa9.12□□□□□ -0.95
PDE6A-205ENST00000617647 GOLGA6L1Q8N7Z2 621 aa9.12□□□□□ -0.95
PDE6A-205ENST00000617647 PNISRQ8TF01 805 aaKnown RBP9.12□□□□□ -0.95
PDE6A-205ENST00000617647 ZSCAN20P17040 1043 aaPredicted RBP9.12□□□□□ -0.95
PDE6A-205ENST00000617647 CNPY4Q8N129 248 aa9.12□□□□□ -0.95
PDE6A-205ENST00000617647 L3MBTL2Q969R5 705 aa9.12□□□□□ -0.95
PDE6A-205ENST00000617647 ZKSCAN5Q9Y2L8 839 aa9.11□□□□□ -0.95
PDE6A-205ENST00000617647 GTF2A1P52655 376 aaPredicted RBP9.11□□□□□ -0.95
PDE6A-205ENST00000617647 DRC7Q8IY82 874 aa9.11□□□□□ -0.95
PDE6A-205ENST00000617647 FAM193AP78312 1265 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms