RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 PMFBP1Q8TBY8 1022 aa7.42□□□□□ -1.22
RFX3-212ENST00000617270 AKAP17AQ02040 695 aaKnown RBP7.41□□□□□ -1.22
RFX3-212ENST00000617270 TEX35Q5T0J7 233 aa7.41□□□□□ -1.22
RFX3-212ENST00000617270 FAM184AQ8NB25 1140 aa7.41□□□□□ -1.22
RFX3-212ENST00000617270 FAM13BQ9NYF5 915 aa7.41□□□□□ -1.22
RFX3-212ENST00000617270 DDX49Q9Y6V7 483 aaKnown RBP7.41□□□□□ -1.22
RFX3-212ENST00000617270 SCRIBQ14160 1630 aa7.41□□□□□ -1.22
RFX3-212ENST00000617270 BCL11BQ9C0K0 894 aaPredicted RBP7.41□□□□□ -1.22
RFX3-212ENST00000617270 HOMER1Q86YM7 354 aa7.4□□□□□ -1.22
RFX3-212ENST00000617270 FBXW7Q969H0 707 aa7.4□□□□□ -1.22
RFX3-212ENST00000617270 HDGFP51858 240 aaKnown RBP7.4□□□□□ -1.22
RFX3-212ENST00000617270 RUFY1Q96T51 708 aa7.4□□□□□ -1.22
RFX3-212ENST00000617270 NAP1L1P55209 391 aaKnown RBP7.4□□□□□ -1.23
RFX3-212ENST00000617270 RILPL2Q969X0 211 aa7.39□□□□□ -1.23
RFX3-212ENST00000617270 CEP162Q5TB80 1403 aa7.39□□□□□ -1.23
RFX3-212ENST00000617270 MAP7D2Q96T17 732 aa7.39□□□□□ -1.23
RFX3-212ENST00000617270 DHX16O60231 1041 aaKnown RBP7.39□□□□□ -1.23
RFX3-212ENST00000617270 TRHP20396 242 aaPredicted RBP7.39□□□□□ -1.23
RFX3-212ENST00000617270 CCDC146Q8IYE0 955 aa7.39□□□□□ -1.23
RFX3-212ENST00000617270 CTDP1Q9Y5B0 961 aaPredicted RBP7.39□□□□□ -1.23
RFX3-212ENST00000617270 CT47A1Q5JQC4 288 aaPredicted RBP7.39□□□□□ -1.23
RFX3-212ENST00000617270 HDAC5Q9UQL6 1122 aa7.39□□□□□ -1.23
RFX3-212ENST00000617270 SLC4A3P48751 1232 aa7.38□□□□□ -1.23
RFX3-212ENST00000617270 ATP6V1DQ9Y5K8 247 aa7.38□□□□□ -1.23
RFX3-212ENST00000617270 TRIM34Q9BYJ4 488 aa7.38□□□□□ -1.23
RFX3-212ENST00000617270 HSPA5P11021 654 aaKnown RBP7.38□□□□□ -1.23
RFX3-212ENST00000617270 ANKRD20A12PQ8NF67 263 aa7.38□□□□□ -1.23
RFX3-212ENST00000617270 AK7Q96M32 723 aa7.38□□□□□ -1.23
RFX3-212ENST00000617270 TIMELESSQ9UNS1 1208 aa7.38□□□□□ -1.23
RFX3-212ENST00000617270 CCNB3Q8WWL7 1395 aa7.38□□□□□ -1.23
RFX3-212ENST00000617270 LTV1Q96GA3 475 aaPredicted RBP7.38□□□□□ -1.23
RFX3-212ENST00000617270 CENPJQ9HC77 1338 aaPredicted RBP7.37□□□□□ -1.23
RFX3-212ENST00000617270 CCDC43Q96MW1 224 aaKnown RBP7.37□□□□□ -1.23
RFX3-212ENST00000617270 CDR1P51861 262 aa7.37□□□□□ -1.23
RFX3-212ENST00000617270 PLCD4Q9BRC7 762 aa7.37□□□□□ -1.23
RFX3-212ENST00000617270 NOM1Q5C9Z4 860 aaKnown RBP7.37□□□□□ -1.23
RFX3-212ENST00000617270 SYNE3Q6ZMZ3 975 aa7.37□□□□□ -1.23
RFX3-212ENST00000617270 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
RFX3-212ENST00000617270 CCDC191Q8NCU4 936 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 H0YHG0 523 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 ODF2Q5BJF6 829 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 SAMD1Q6SPF0 538 aaPredicted RBP7.36□□□□□ -1.23
RFX3-212ENST00000617270 ROCK2O75116 1388 aaKnown RBP7.36□□□□□ -1.23
RFX3-212ENST00000617270 CCER2I3L3R5 266 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 TRIM29Q14134 588 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 GOLGA3Q08378 1498 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 MSH5O43196 834 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 FOSBP53539 338 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 BICD2Q8TD16 824 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 DIAPH3Q9NSV4 1193 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 HSP90B2PQ58FF3 399 aa7.36□□□□□ -1.23
RFX3-212ENST00000617270 GGT6Q6P531 493 aa7.35□□□□□ -1.23
RFX3-212ENST00000617270 MNS1Q8NEH6 495 aa7.35□□□□□ -1.23
RFX3-212ENST00000617270 ZFYVE27Q5T4F4 411 aa7.35□□□□□ -1.23
RFX3-212ENST00000617270 CPLX1O14810 134 aa7.35□□□□□ -1.23
RFX3-212ENST00000617270 CCDC47Q96A33 483 aaKnown RBP7.35□□□□□ -1.23
RFX3-212ENST00000617270 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.35□□□□□ -1.23
RFX3-212ENST00000617270 IFT57Q9NWB7 429 aa7.35□□□□□ -1.23
RFX3-212ENST00000617270 SKIDA1Q1XH10 827 aa7.35□□□□□ -1.23
RFX3-212ENST00000617270 AMOTL1Q8IY63 956 aa7.35□□□□□ -1.23
RFX3-212ENST00000617270 FOXD1Q16676 465 aa7.35□□□□□ -1.23
RFX3-212ENST00000617270 NOL10Q9BSC4 688 aaKnown RBP7.35□□□□□ -1.23
RFX3-212ENST00000617270 GSE1Q14687 1217 aa7.34□□□□□ -1.23
RFX3-212ENST00000617270 HSP90AB2PQ58FF8 381 aa7.34□□□□□ -1.23
RFX3-212ENST00000617270 CWC22Q9HCG8 908 aaKnown RBP7.34□□□□□ -1.23
RFX3-212ENST00000617270 ANO2Q9NQ90 1003 aa7.34□□□□□ -1.23
RFX3-212ENST00000617270 APPP05067 770 aa7.34□□□□□ -1.23
RFX3-212ENST00000617270 ARGLU1Q9NWB6 273 aaPredicted RBP7.34□□□□□ -1.23
RFX3-212ENST00000617270 SKOR2Q2VWA4 1001 aaPredicted RBP7.34□□□□□ -1.23
RFX3-212ENST00000617270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.34□□□□□ -1.238e-7■■■□□ 18.5
RFX3-212ENST00000617270 RRP7AQ9Y3A4 280 aaKnown RBP7.34□□□□□ -1.23
RFX3-212ENST00000617270 CAGE1Q8TC20 777 aa7.34□□□□□ -1.23
RFX3-212ENST00000617270 TSHZ2Q9NRE2 1034 aa7.34□□□□□ -1.23
RFX3-212ENST00000617270 ACBD3Q9H3P7 528 aa7.34□□□□□ -1.23
RFX3-212ENST00000617270 DCTN1Q14203 1278 aa7.33□□□□□ -1.24
RFX3-212ENST00000617270 RALBP1Q15311 655 aa7.33□□□□□ -1.24
RFX3-212ENST00000617270 PAF1Q8N7H5 531 aa7.33□□□□□ -1.24
RFX3-212ENST00000617270 AMPHP49418 695 aa7.33□□□□□ -1.24
RFX3-212ENST00000617270 ANKRD45Q5TZF3 282 aa7.33□□□□□ -1.24
RFX3-212ENST00000617270 TTLL5Q6EMB2 1281 aa7.33□□□□□ -1.24
RFX3-212ENST00000617270 VPS37CA5D8V6 355 aaPredicted RBP7.33□□□□□ -1.24
RFX3-212ENST00000617270 NFXL1Q6ZNB6 911 aa7.33□□□□□ -1.24
RFX3-212ENST00000617270 BCL2L13Q9BXK5 485 aa7.33□□□□□ -1.24
RFX3-212ENST00000617270 HOOK1Q9UJC3 728 aaKnown RBP7.33□□□□□ -1.24
RFX3-212ENST00000617270 ELL2O00472 640 aaPredicted RBP7.32□□□□□ -1.24
RFX3-212ENST00000617270 NUTM2DQ5VT03 806 aaPredicted RBP7.32□□□□□ -1.24
RFX3-212ENST00000617270 EIF3AQ14152 1382 aaKnown RBP7.32□□□□□ -1.24
RFX3-212ENST00000617270 HSP90AB3PQ58FF7 597 aa7.32□□□□□ -1.24
RFX3-212ENST00000617270 CPLX2Q6PUV4 134 aaKnown RBP7.32□□□□□ -1.24
RFX3-212ENST00000617270 RDXP35241 583 aaKnown RBP7.32□□□□□ -1.24
RFX3-212ENST00000617270 CHMP4CQ96CF2 233 aa7.32□□□□□ -1.24
RFX3-212ENST00000617270 NUTM2FA1L443 756 aa7.32□□□□□ -1.24
RFX3-212ENST00000617270 PKD2Q13563 968 aa7.32□□□□□ -1.24
RFX3-212ENST00000617270 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.32□□□□□ -1.24
RFX3-212ENST00000617270 NGEFQ8N5V2 710 aa7.32□□□□□ -1.24
RFX3-212ENST00000617270 LMOD3Q0VAK6 560 aa7.32□□□□□ -1.24
RFX3-212ENST00000617270 DHX37Q8IY37 1157 aaKnown RBP7.32□□□□□ -1.24
RFX3-212ENST00000617270 NGDNQ8NEJ9 315 aaKnown RBP7.32□□□□□ -1.24
RFX3-212ENST00000617270 ZKSCAN1P17029 563 aaPredicted RBP7.31□□□□□ -1.24
RFX3-212ENST00000617270 EPS15P42566 896 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms