RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
SEMA3B-212ENST00000616701 CCDC144AA2RUR9 1427 aa21.69■■□□□ 1.06
SEMA3B-212ENST00000616701 ADGRL1O94910 1474 aa21.69■■□□□ 1.06
SEMA3B-212ENST00000616701 CCDC7Q96M83 1385 aa21.69■■□□□ 1.06
SEMA3B-212ENST00000616701 ERBINQ96RT1 1412 aa21.68■■□□□ 1.06
SEMA3B-212ENST00000616701 PLA2R1Q13018 1463 aa21.68■■□□□ 1.06
SEMA3B-212ENST00000616701 SPATA31E1Q6ZUB1 1445 aa21.68■■□□□ 1.06
SEMA3B-212ENST00000616701 USP47Q96K76 1375 aa21.67■■□□□ 1.06
SEMA3B-212ENST00000616701 KIF7Q2M1P5 1343 aa21.66■■□□□ 1.06
SEMA3B-212ENST00000616701 ZFYVE16Q7Z3T8 1539 aa21.66■■□□□ 1.06
SEMA3B-212ENST00000616701 ARAP3Q8WWN8 1544 aa21.66■■□□□ 1.06
SEMA3B-212ENST00000616701 CNGB1Q14028 1251 aaPredicted RBP21.66■■□□□ 1.06
SEMA3B-212ENST00000616701 CARD11Q9BXL7 1154 aa21.66■■□□□ 1.06
SEMA3B-212ENST00000616701 IQGAP3Q86VI3 1631 aa21.64■■□□□ 1.06
SEMA3B-212ENST00000616701 KIF3BO15066 747 aa21.63■■□□□ 1.05
SEMA3B-212ENST00000616701 CCER2I3L3R5 266 aa21.63■■□□□ 1.05
SEMA3B-212ENST00000616701 CYB5RLQ6IPT4 315 aa21.62■■□□□ 1.05
SEMA3B-212ENST00000616701 RTEL1-TNFRSF6BF6WH68 1400 aa21.61■■□□□ 1.05
SEMA3B-212ENST00000616701 ATP7AQ04656 1500 aa21.61■■□□□ 1.05
SEMA3B-212ENST00000616701 CNTLNQ9NXG0 1405 aa21.6■■□□□ 1.05
SEMA3B-212ENST00000616701 UHRF1BP1Q6BDS2 1440 aa21.6■■□□□ 1.05
SEMA3B-212ENST00000616701 CD109Q6YHK3 1445 aa21.59■■□□□ 1.05
SEMA3B-212ENST00000616701 MAGI2Q86UL8 1455 aa21.59■■□□□ 1.05
SEMA3B-212ENST00000616701 RALGAPBQ86X10 1494 aa21.58■■□□□ 1.04
SEMA3B-212ENST00000616701 NBPF1Q3BBV0 1214 aa21.57■■□□□ 1.04
SEMA3B-212ENST00000616701 ROCK2O75116 1388 aaKnown RBP21.56■■□□□ 1.04
SEMA3B-212ENST00000616701 BCORL1Q5H9F3 1711 aa21.56■■□□□ 1.04
SEMA3B-212ENST00000616701 ST20-MTHFSA0A0A6YYL1 179 aa21.56■■□□□ 1.04
SEMA3B-212ENST00000616701 KDM5CP41229 1560 aa21.55■■□□□ 1.04
SEMA3B-212ENST00000616701 ANO8Q9HCE9 1232 aaPredicted RBP21.55■■□□□ 1.04
SEMA3B-212ENST00000616701 INO80Q9ULG1 1556 aaPredicted RBP21.55■■□□□ 1.04
SEMA3B-212ENST00000616701 A2MP01023 1474 aa21.54■■□□□ 1.04
SEMA3B-212ENST00000616701 CCDC184Q52MB2 194 aa21.54■■□□□ 1.04
SEMA3B-212ENST00000616701 PRAG1Q86YV5 1406 aa21.51■■□□□ 1.03
SEMA3B-212ENST00000616701 DHX29Q7Z478 1369 aaKnown RBP21.51■■□□□ 1.03
SEMA3B-212ENST00000616701 RAPGEF3O95398 923 aa21.51■■□□□ 1.03
SEMA3B-212ENST00000616701 E9PCH4 1651 aa21.5■■□□□ 1.03
SEMA3B-212ENST00000616701 PRKRIP1Q9H875 184 aaPredicted RBP21.49■■□□□ 1.03
SEMA3B-212ENST00000616701 KANK1Q14678 1352 aa21.48■■□□□ 1.03
SEMA3B-212ENST00000616701 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
SEMA3B-212ENST00000616701 ZNF518AQ6AHZ1 1483 aa21.47■■□□□ 1.03
SEMA3B-212ENST00000616701 ATP10AO60312 1499 aa21.46■■□□□ 1.03
SEMA3B-212ENST00000616701 GGT6Q6P531 493 aa21.45■■□□□ 1.02
SEMA3B-212ENST00000616701 POLR1AO95602 1720 aaPredicted RBP21.45■■□□□ 1.02
SEMA3B-212ENST00000616701 DEPDC5O75140 1603 aa21.43■■□□□ 1.02
SEMA3B-212ENST00000616701 TRPM1Q7Z4N2 1603 aa21.43■■□□□ 1.02
SEMA3B-212ENST00000616701 POGZQ7Z3K3 1410 aa21.43■■□□□ 1.02
SEMA3B-212ENST00000616701 HNRNPUQ00839 825 aaKnown RBP eCLIP21.41■■□□□ 1.02
SEMA3B-212ENST00000616701 FAM9BQ8IZU0 186 aa21.41■■□□□ 1.02
SEMA3B-212ENST00000616701 MRS2Q9HD23 443 aa21.4■■□□□ 1.02
SEMA3B-212ENST00000616701 MROH1Q8NDA8 1641 aa21.4■■□□□ 1.02
SEMA3B-212ENST00000616701 UGGT1Q9NYU2 1555 aa21.39■■□□□ 1.01
SEMA3B-212ENST00000616701 TET3O43151 1660 aa21.39■■□□□ 1.01
SEMA3B-212ENST00000616701 CLTCL1P53675 1640 aa21.39■■□□□ 1.01
SEMA3B-212ENST00000616701 SPHKAPQ2M3C7 1700 aa21.39■■□□□ 1.01
SEMA3B-212ENST00000616701 TRPM2O94759 1503 aa21.38■■□□□ 1.01
SEMA3B-212ENST00000616701 PTPRTO14522 1441 aa21.37■■□□□ 1.01
SEMA3B-212ENST00000616701 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
SEMA3B-212ENST00000616701 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
SEMA3B-212ENST00000616701 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
SEMA3B-212ENST00000616701 VWDEQ8N2E2 1590 aa21.36■■□□□ 1.01
SEMA3B-212ENST00000616701 CFAP74Q9C0B2 1584 aa21.36■■□□□ 1.01
SEMA3B-212ENST00000616701 PRDM15P57071 1507 aaPredicted RBP21.36■■□□□ 1.01
SEMA3B-212ENST00000616701 CFAP65Q6ZU64 1925 aaKnown RBP21.35■■□□□ 1.01
SEMA3B-212ENST00000616701 CHGAP10645 457 aaKnown RBP21.35■■□□□ 1.01
SEMA3B-212ENST00000616701 FAM69CQ0P6D2 419 aa21.35■■□□□ 1.01
SEMA3B-212ENST00000616701 EIF2AK4Q9P2K8 1649 aaKnown RBP21.35■■□□□ 1.01
SEMA3B-212ENST00000616701 HECW2Q9P2P5 1572 aa21.33■■□□□ 1.01
SEMA3B-212ENST00000616701 FRMPD1Q5SYB0 1578 aa21.33■■□□□ 1
SEMA3B-212ENST00000616701 ARID4BQ4LE39 1312 aaPredicted RBP21.33■■□□□ 1
SEMA3B-212ENST00000616701 CEP152O94986 1710 aa21.33■■□□□ 1
SEMA3B-212ENST00000616701 MLH3Q9UHC1 1453 aa21.32■■□□□ 1
SEMA3B-212ENST00000616701 SUPT16HQ9Y5B9 1047 aaKnown RBP21.32■■□□□ 1
SEMA3B-212ENST00000616701 GPRASP1Q5JY77 1395 aa21.32■■□□□ 1
SEMA3B-212ENST00000616701 ABCA6Q8N139 1617 aa21.31■■□□□ 1
SEMA3B-212ENST00000616701 PPRC1Q5VV67 1664 aaKnown RBP21.3■■□□□ 1
SEMA3B-212ENST00000616701 WASHC2CQ9Y4E1 1318 aa21.3■■□□□ 1
SEMA3B-212ENST00000616701 NEO1Q92859 1461 aa21.3■■□□□ 1
SEMA3B-212ENST00000616701 DISP3Q9P2K9 1392 aa21.3■■□□□ 1
SEMA3B-212ENST00000616701 TSHZ2Q9NRE2 1034 aa21.3■■□□□ 1
SEMA3B-212ENST00000616701 SENP3-EIF4A1A0A087X0R7 540 aa21.29■■□□□ 1
SEMA3B-212ENST00000616701 TESK2Q96S53 571 aa21.29■■□□□ 1
SEMA3B-212ENST00000616701 EFCAB6Q5THR3 1501 aa21.28■■□□□ 1
SEMA3B-212ENST00000616701 MADDQ8WXG6 1647 aa21.27■□□□□ 0.99
SEMA3B-212ENST00000616701 YEATS2Q9ULM3 1422 aa21.26■□□□□ 0.99
SEMA3B-212ENST00000616701 BCANQ96GW7 911 aa21.25■□□□□ 0.99
SEMA3B-212ENST00000616701 ADGRF5Q8IZF2 1346 aa21.25■□□□□ 0.99
SEMA3B-212ENST00000616701 CFAP70Q5T0N1 1121 aa21.24■□□□□ 0.99
SEMA3B-212ENST00000616701 MAP3K4Q9Y6R4 1608 aa21.24■□□□□ 0.99
SEMA3B-212ENST00000616701 TSPOAP1O95153 1857 aa21.24■□□□□ 0.99
SEMA3B-212ENST00000616701 NPATQ14207 1427 aa21.24■□□□□ 0.99
SEMA3B-212ENST00000616701 RNF17Q9BXT8 1623 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-212ENST00000616701 FKBP8Q14318 412 aa21.22■□□□□ 0.99
SEMA3B-212ENST00000616701 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
SEMA3B-212ENST00000616701 TMF1P82094 1093 aa21.21■□□□□ 0.99
SEMA3B-212ENST00000616701 CCDC136Q96JN2 1154 aa21.21■□□□□ 0.99
SEMA3B-212ENST00000616701 DIP2CQ9Y2E4 1556 aa21.21■□□□□ 0.99
SEMA3B-212ENST00000616701 NUTM2DQ5VT03 806 aaPredicted RBP21.2■□□□□ 0.98
SEMA3B-212ENST00000616701 COL17A1Q9UMD9 1497 aaPredicted RBP21.2■□□□□ 0.98
SEMA3B-212ENST00000616701 LAMC1P11047 1609 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms