RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 PLIN1O60240 522 aa23.44■■□□□ 1.34
CDH23-212ENST00000616684 GZF1Q9H116 711 aaPredicted RBP23.43■■□□□ 1.34
CDH23-212ENST00000616684 NGDNQ8NEJ9 315 aaKnown RBP23.43■■□□□ 1.34
CDH23-212ENST00000616684 LMOD3Q0VAK6 560 aa23.43■■□□□ 1.34
CDH23-212ENST00000616684 CSB-PGBD3P0DP91 1061 aa23.42■■□□□ 1.34
CDH23-212ENST00000616684 NUTM2FA1L443 756 aa23.42■■□□□ 1.34
CDH23-212ENST00000616684 HMMRO75330 724 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 EXOC6Q8TAG9 804 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 UACAQ9BZF9 1416 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 GOLGA6L6A8MZA4 724 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 NRDCO43847 1150 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 SLC4A10Q6U841 1118 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 EID1Q9Y6B2 187 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 RRP1P56182 461 aaKnown RBP23.4■■□□□ 1.34
CDH23-212ENST00000616684 VGFO15240 615 aaPredicted RBP23.4■■□□□ 1.34
CDH23-212ENST00000616684 BCL2L13Q9BXK5 485 aa23.4■■□□□ 1.34
CDH23-212ENST00000616684 MSNP26038 577 aaKnown RBP23.39■■□□□ 1.33
CDH23-212ENST00000616684 LRRC9Q6ZRR7 1453 aa23.38■■□□□ 1.33
CDH23-212ENST00000616684 AMPHP49418 695 aa23.38■■□□□ 1.33
CDH23-212ENST00000616684 CGNL1Q0VF96 1302 aa23.37■■□□□ 1.33
CDH23-212ENST00000616684 E9PSI1 815 aa23.37■■□□□ 1.33
CDH23-212ENST00000616684 APAF1O14727 1248 aa23.37■■□□□ 1.33
CDH23-212ENST00000616684 CENPQQ7L2Z9 268 aaPredicted RBP23.37■■□□□ 1.33
CDH23-212ENST00000616684 ZNF330Q9Y3S2 320 aaPredicted RBP23.35■■□□□ 1.33
CDH23-212ENST00000616684 EVC2Q86UK5 1308 aa23.35■■□□□ 1.33
CDH23-212ENST00000616684 PDE4AP27815 886 aa23.35■■□□□ 1.33
CDH23-212ENST00000616684 KIF7Q2M1P5 1343 aa23.34■■□□□ 1.33
CDH23-212ENST00000616684 CCDC7Q96M83 1385 aa23.34■■□□□ 1.33
CDH23-212ENST00000616684 ELL2O00472 640 aaPredicted RBP23.34■■□□□ 1.33
CDH23-212ENST00000616684 PTMSP20962 102 aa23.34■■□□□ 1.33
CDH23-212ENST00000616684 TRIM6-TRIM34B2RNG4 842 aa23.34■■□□□ 1.33
CDH23-212ENST00000616684 CRBNQ96SW2 442 aa23.34■■□□□ 1.33
CDH23-212ENST00000616684 NCAPD3P42695 1498 aa23.33■■□□□ 1.33
CDH23-212ENST00000616684 LTV1Q96GA3 475 aaPredicted RBP23.33■■□□□ 1.32
CDH23-212ENST00000616684 TULP1O00294 542 aaPredicted RBP23.31■■□□□ 1.32
CDH23-212ENST00000616684 HDAC5Q9UQL6 1122 aa23.31■■□□□ 1.32
CDH23-212ENST00000616684 COG6Q9Y2V7 657 aa23.3■■□□□ 1.32
CDH23-212ENST00000616684 CUX1P39880 1505 aa23.3■■□□□ 1.32
CDH23-212ENST00000616684 ZKSCAN2Q63HK3 967 aa23.29■■□□□ 1.32
CDH23-212ENST00000616684 MINK1Q8N4C8 1332 aaPredicted RBP23.29■■□□□ 1.32
CDH23-212ENST00000616684 CHAF1AQ13111 956 aaPredicted RBP23.29■■□□□ 1.32
CDH23-212ENST00000616684 FAM161AQ3B820 660 aa23.29■■□□□ 1.32
CDH23-212ENST00000616684 DRC7Q8IY82 874 aa23.28■■□□□ 1.32
CDH23-212ENST00000616684 CASKIN1Q8WXD9 1431 aa23.27■■□□□ 1.32
CDH23-212ENST00000616684 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
CDH23-212ENST00000616684 COG3Q96JB2 828 aa23.26■■□□□ 1.31
CDH23-212ENST00000616684 ANKRD50Q9ULJ7 1429 aa23.26■■□□□ 1.31
CDH23-212ENST00000616684 NCOA2Q15596 1464 aa23.26■■□□□ 1.31
CDH23-212ENST00000616684 FOXD4L1Q9NU39 408 aa23.25■■□□□ 1.31
CDH23-212ENST00000616684 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.31
CDH23-212ENST00000616684 GNL2Q13823 731 aaKnown RBP23.25■■□□□ 1.31
CDH23-212ENST00000616684 GPATCH3Q96I76 525 aa23.25■■□□□ 1.31
CDH23-212ENST00000616684 CHMP3Q9Y3E7 222 aa23.24■■□□□ 1.31
CDH23-212ENST00000616684 GOLGA6L3A6NEY3 463 aa23.23■■□□□ 1.31
CDH23-212ENST00000616684 NGEFQ8N5V2 710 aa23.23■■□□□ 1.31
CDH23-212ENST00000616684 WASHC2AQ641Q2 1341 aa23.22■■□□□ 1.31
CDH23-212ENST00000616684 GORABQ5T7V8 394 aa23.22■■□□□ 1.31
CDH23-212ENST00000616684 SYAP1Q96A49 352 aaPredicted RBP23.22■■□□□ 1.31
CDH23-212ENST00000616684 CNTLNQ9NXG0 1405 aa23.21■■□□□ 1.31
CDH23-212ENST00000616684 SLC4A3P48751 1232 aa23.21■■□□□ 1.31
CDH23-212ENST00000616684 ANKRD45Q5TZF3 282 aa23.21■■□□□ 1.31
CDH23-212ENST00000616684 FYCO1Q9BQS8 1478 aa23.21■■□□□ 1.31
CDH23-212ENST00000616684 NOL8Q76FK4 1167 aaKnown RBP23.21■■□□□ 1.31
CDH23-212ENST00000616684 STAC3Q96MF2 364 aa23.2■■□□□ 1.3
CDH23-212ENST00000616684 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
CDH23-212ENST00000616684 RRBP1Q9P2E9 1410 aaKnown RBP23.18■■□□□ 1.3
CDH23-212ENST00000616684 HTATSF1O43719 755 aaKnown RBP23.18■■□□□ 1.3
CDH23-212ENST00000616684 ST18O60284 1047 aa23.18■■□□□ 1.3
CDH23-212ENST00000616684 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
CDH23-212ENST00000616684 DIAPH1O60610 1272 aaKnown RBP23.18■■□□□ 1.3
CDH23-212ENST00000616684 KIAA2012Q0VF49 1180 aa23.17■■□□□ 1.3
CDH23-212ENST00000616684 TAF7LQ5H9L4 462 aa23.16■■□□□ 1.3
CDH23-212ENST00000616684 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
CDH23-212ENST00000616684 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
CDH23-212ENST00000616684 RIPK4P57078 832 aa23.14■■□□□ 1.29
CDH23-212ENST00000616684 MIA2Q96PC5 1412 aa23.14■■□□□ 1.29
CDH23-212ENST00000616684 DDX19BQ9UMR2 479 aa23.13■■□□□ 1.29
CDH23-212ENST00000616684 FANCIQ9NVI1 1328 aa23.13■■□□□ 1.29
CDH23-212ENST00000616684 ISY1Q9ULR0 285 aaKnown RBP23.13■■□□□ 1.29
CDH23-212ENST00000616684 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
CDH23-212ENST00000616684 DZIP1LQ8IYY4 767 aaKnown RBP23.12■■□□□ 1.29
CDH23-212ENST00000616684 RUNDC1Q96C34 613 aa23.12■■□□□ 1.29
CDH23-212ENST00000616684 CFTRP13569 1480 aa23.12■■□□□ 1.29
CDH23-212ENST00000616684 HSP90B1P14625 803 aaKnown RBP23.1■■□□□ 1.29
CDH23-212ENST00000616684 RILPL2Q969X0 211 aa23.1■■□□□ 1.29
CDH23-212ENST00000616684 PRXQ9BXM0 1461 aa23.09■■□□□ 1.29
CDH23-212ENST00000616684 TEFQ10587 303 aa23.08■■□□□ 1.29
CDH23-212ENST00000616684 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
CDH23-212ENST00000616684 AFAP1Q8N556 730 aa23.07■■□□□ 1.28
CDH23-212ENST00000616684 BRD4O60885 1362 aaPredicted RBP23.07■■□□□ 1.28
CDH23-212ENST00000616684 FOXD4L5Q5VV16 416 aaPredicted RBP23.07■■□□□ 1.28
CDH23-212ENST00000616684 FOXD4L4Q8WXT5 416 aaPredicted RBP23.07■■□□□ 1.28
CDH23-212ENST00000616684 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
CDH23-212ENST00000616684 ADAMTS8Q9UP79 889 aa23.06■■□□□ 1.28
CDH23-212ENST00000616684 DDX11L8A8MPP1 907 aa23.06■■□□□ 1.28
CDH23-212ENST00000616684 API5Q9BZZ5 524 aaKnown RBP23.06■■□□□ 1.28
CDH23-212ENST00000616684 KIF16BQ96L93 1317 aa23.06■■□□□ 1.28
CDH23-212ENST00000616684 CSPP1Q1MSJ5 1256 aa23.05■■□□□ 1.28
CDH23-212ENST00000616684 TMEM132EQ6IEE7 984 aa23.05■■□□□ 1.28
CDH23-212ENST00000616684 GGNBP2Q9H3C7 697 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms