RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 MPHOSPH9Q99550 1183 aa16.93■□□□□ 0.3
PPP4R3B-205ENST00000616288 RWDD1Q9H446 243 aaPredicted RBP16.92■□□□□ 0.3
PPP4R3B-205ENST00000616288 C20orf194Q5TEA3 1177 aa16.92■□□□□ 0.3
PPP4R3B-205ENST00000616288 C22orf23Q9BZE7 217 aa16.91■□□□□ 0.3
PPP4R3B-205ENST00000616288 CCDC146Q8IYE0 955 aa16.9■□□□□ 0.3
PPP4R3B-205ENST00000616288 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
PPP4R3B-205ENST00000616288 IGSF3O75054 1194 aa16.9■□□□□ 0.3
PPP4R3B-205ENST00000616288 APPP05067 770 aa16.9■□□□□ 0.3
PPP4R3B-205ENST00000616288 DRC7Q8IY82 874 aa16.9■□□□□ 0.3
PPP4R3B-205ENST00000616288 CAVIN1Q6NZI2 390 aaKnown RBP16.89■□□□□ 0.29
PPP4R3B-205ENST00000616288 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
PPP4R3B-205ENST00000616288 RNF123Q5XPI4 1314 aa16.88■□□□□ 0.29
PPP4R3B-205ENST00000616288 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
PPP4R3B-205ENST00000616288 MCTP1Q6DN14 999 aa16.87■□□□□ 0.29
PPP4R3B-205ENST00000616288 FOXD4L6Q3SYB3 417 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3B-205ENST00000616288 FOXD4L3Q6VB84 417 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3B-205ENST00000616288 BCL2L13Q9BXK5 485 aa16.86■□□□□ 0.29
PPP4R3B-205ENST00000616288 KIF15Q9NS87 1388 aa16.86■□□□□ 0.29
PPP4R3B-205ENST00000616288 C8orf34Q49A92 452 aa16.86■□□□□ 0.29
PPP4R3B-205ENST00000616288 SPDYE4A6NLX3 237 aa16.86■□□□□ 0.29
PPP4R3B-205ENST00000616288 SMAP1Q8IYB5 467 aaPredicted RBP16.85■□□□□ 0.29
PPP4R3B-205ENST00000616288 TBC1D2Q9BYX2 928 aa16.85■□□□□ 0.29
PPP4R3B-205ENST00000616288 ARHGAP35Q9NRY4 1499 aa16.85■□□□□ 0.29
PPP4R3B-205ENST00000616288 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
PPP4R3B-205ENST00000616288 TRERF1Q96PN7 1200 aa16.83■□□□□ 0.29
PPP4R3B-205ENST00000616288 CCDC39Q9UFE4 941 aa16.83■□□□□ 0.29
PPP4R3B-205ENST00000616288 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.28
PPP4R3B-205ENST00000616288 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
PPP4R3B-205ENST00000616288 CCDC66A2RUB6 948 aa16.82■□□□□ 0.28
PPP4R3B-205ENST00000616288 CUX2O14529 1486 aa16.82■□□□□ 0.28
PPP4R3B-205ENST00000616288 ST20-MTHFSA0A0A6YYL1 179 aa16.81■□□□□ 0.28
PPP4R3B-205ENST00000616288 PANK1Q8TE04 598 aa16.81■□□□□ 0.28
PPP4R3B-205ENST00000616288 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
PPP4R3B-205ENST00000616288 PPP4R3BQ5MIZ7 849 aa16.8■□□□□ 0.28
PPP4R3B-205ENST00000616288 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
PPP4R3B-205ENST00000616288 ERICH4A6NGS2 130 aa16.8■□□□□ 0.28
PPP4R3B-205ENST00000616288 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
PPP4R3B-205ENST00000616288 OFD1O75665 1012 aa16.8■□□□□ 0.28
PPP4R3B-205ENST00000616288 KCNJ4P48050 445 aa16.8■□□□□ 0.28
PPP4R3B-205ENST00000616288 SASS6Q6UVJ0 657 aa16.8■□□□□ 0.28
PPP4R3B-205ENST00000616288 DYNC1I1O14576 645 aa16.79■□□□□ 0.28
PPP4R3B-205ENST00000616288 HMGN5P82970 282 aaKnown RBP16.79■□□□□ 0.28
PPP4R3B-205ENST00000616288 SYAP1Q96A49 352 aaPredicted RBP16.79■□□□□ 0.28
PPP4R3B-205ENST00000616288 PDCL2Q8N4E4 241 aa16.79■□□□□ 0.28
PPP4R3B-205ENST00000616288 ZNF592Q92610 1267 aa16.78■□□□□ 0.28
PPP4R3B-205ENST00000616288 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.28
PPP4R3B-205ENST00000616288 SMARCA2P51531 1590 aa16.77■□□□□ 0.28
PPP4R3B-205ENST00000616288 TAF3Q5VWG9 929 aa16.77■□□□□ 0.27
PPP4R3B-205ENST00000616288 AEBP2Q6ZN18 517 aaPredicted RBP16.77■□□□□ 0.27
PPP4R3B-205ENST00000616288 ERBB4Q15303 1308 aa16.77■□□□□ 0.27
PPP4R3B-205ENST00000616288 USP47Q96K76 1375 aa16.76■□□□□ 0.27
PPP4R3B-205ENST00000616288 NOL8Q76FK4 1167 aaKnown RBP16.76■□□□□ 0.27
PPP4R3B-205ENST00000616288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.272e-8■■■□□ 14.7
PPP4R3B-205ENST00000616288 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
PPP4R3B-205ENST00000616288 KIF3AQ9Y496 699 aa16.76■□□□□ 0.27
PPP4R3B-205ENST00000616288 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
PPP4R3B-205ENST00000616288 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
PPP4R3B-205ENST00000616288 CASC1Q6TDU7 716 aa16.74■□□□□ 0.27
PPP4R3B-205ENST00000616288 U2SURPO15042 1029 aaKnown RBP16.74■□□□□ 0.27
PPP4R3B-205ENST00000616288 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
PPP4R3B-205ENST00000616288 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
PPP4R3B-205ENST00000616288 ROCK2O75116 1388 aaKnown RBP16.74■□□□□ 0.27
PPP4R3B-205ENST00000616288 BCAR3O75815 825 aa16.74■□□□□ 0.27
PPP4R3B-205ENST00000616288 SEC24BO95487 1268 aa16.74■□□□□ 0.27
PPP4R3B-205ENST00000616288 KIF27Q86VH2 1401 aa16.73■□□□□ 0.27
PPP4R3B-205ENST00000616288 PDZRN3Q9UPQ7 1066 aa16.73■□□□□ 0.27
PPP4R3B-205ENST00000616288 PRPF40AO75400 957 aaKnown RBP16.73■□□□□ 0.27
PPP4R3B-205ENST00000616288 APAF1O14727 1248 aa16.72■□□□□ 0.27
PPP4R3B-205ENST00000616288 LETM1O95202 739 aaPredicted RBP16.72■□□□□ 0.27
PPP4R3B-205ENST00000616288 UACAQ9BZF9 1416 aa16.72■□□□□ 0.27
PPP4R3B-205ENST00000616288 FAM177BA6PVY3 158 aa16.72■□□□□ 0.27
PPP4R3B-205ENST00000616288 TNPO1Q92973 898 aaKnown RBP16.71■□□□□ 0.27
PPP4R3B-205ENST00000616288 BRD4O60885 1362 aaPredicted RBP16.71■□□□□ 0.27
PPP4R3B-205ENST00000616288 APBB1O00213 710 aa16.7■□□□□ 0.26
PPP4R3B-205ENST00000616288 ADAMTS8Q9UP79 889 aa16.7■□□□□ 0.26
PPP4R3B-205ENST00000616288 GOLGA6L6A8MZA4 724 aa16.69■□□□□ 0.26
PPP4R3B-205ENST00000616288 FSD2A1L4K1 749 aa16.69■□□□□ 0.26
PPP4R3B-205ENST00000616288 PKD2Q13563 968 aa16.69■□□□□ 0.26
PPP4R3B-205ENST00000616288 GTPBP4Q9BZE4 634 aaKnown RBP16.68■□□□□ 0.26
PPP4R3B-205ENST00000616288 RRP7AQ9Y3A4 280 aaKnown RBP16.68■□□□□ 0.26
PPP4R3B-205ENST00000616288 TMF1P82094 1093 aa16.68■□□□□ 0.26
PPP4R3B-205ENST00000616288 PANK3Q9H999 370 aa16.67■□□□□ 0.26
PPP4R3B-205ENST00000616288 NCOA1Q15788 1441 aa16.67■□□□□ 0.26
PPP4R3B-205ENST00000616288 PHF14O94880 888 aa16.67■□□□□ 0.26
PPP4R3B-205ENST00000616288 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
PPP4R3B-205ENST00000616288 NPHP1O15259 732 aa16.66■□□□□ 0.26
PPP4R3B-205ENST00000616288 KIF20AO95235 890 aa16.66■□□□□ 0.26
PPP4R3B-205ENST00000616288 TSC1Q92574 1164 aa16.66■□□□□ 0.26
PPP4R3B-205ENST00000616288 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
PPP4R3B-205ENST00000616288 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
PPP4R3B-205ENST00000616288 RIPK4P57078 832 aa16.65■□□□□ 0.26
PPP4R3B-205ENST00000616288 IFT57Q9NWB7 429 aa16.65■□□□□ 0.26
PPP4R3B-205ENST00000616288 GOLGA6L4A6NEF3 574 aa16.64■□□□□ 0.26
PPP4R3B-205ENST00000616288 NUCB2P80303 420 aa16.64■□□□□ 0.25
PPP4R3B-205ENST00000616288 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
PPP4R3B-205ENST00000616288 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
PPP4R3B-205ENST00000616288 SYCE3A1L190 88 aa16.63■□□□□ 0.25
PPP4R3B-205ENST00000616288 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
PPP4R3B-205ENST00000616288 SSFA2P28290 1259 aa16.62■□□□□ 0.25
PPP4R3B-205ENST00000616288 MAP3K1Q13233 1512 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms