RNA–Protein interactions for RNA: ENST00000615680.4

DCLK1-208, Transcript of doublecortin like kinase 1, humanhuman

TSL 2 BASIC

Gene DCLK1, Length 7,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-208ENST00000615680 HSCBQ8IWL3 235 aa8.73□□□□□ -1.01
DCLK1-208ENST00000615680 GLIPR1L2Q4G1C9 344 aa8.72□□□□□ -1.01
DCLK1-208ENST00000615680 TRAK1Q9UPV9 953 aa8.72□□□□□ -1.01
DCLK1-208ENST00000615680 TOMM22Q9NS69 142 aa8.72□□□□□ -1.01
DCLK1-208ENST00000615680 RASSF8Q8NHQ8 419 aa8.72□□□□□ -1.01
DCLK1-208ENST00000615680 EVC2Q86UK5 1308 aa8.72□□□□□ -1.01
DCLK1-208ENST00000615680 LRRFIP1Q32MZ4 808 aaKnown RBP8.71□□□□□ -1.01
DCLK1-208ENST00000615680 NEXNQ0ZGT2 675 aa8.71□□□□□ -1.02
DCLK1-208ENST00000615680 SLC4A10Q6U841 1118 aa8.71□□□□□ -1.02
DCLK1-208ENST00000615680 ANO8Q9HCE9 1232 aaPredicted RBP8.71□□□□□ -1.02
DCLK1-208ENST00000615680 RALBP1Q15311 655 aa8.71□□□□□ -1.02
DCLK1-208ENST00000615680 ITPRIPQ8IWB1 547 aa8.71□□□□□ -1.02
DCLK1-208ENST00000615680 VPS37DQ86XT2 251 aa8.7□□□□□ -1.02
DCLK1-208ENST00000615680 HMGB2P26583 209 aaKnown RBP8.7□□□□□ -1.02
DCLK1-208ENST00000615680 MIER1Q8N108 512 aa8.7□□□□□ -1.02
DCLK1-208ENST00000615680 CCDC144AA2RUR9 1427 aa8.69□□□□□ -1.02
DCLK1-208ENST00000615680 FBXW7Q969H0 707 aa8.69□□□□□ -1.02
DCLK1-208ENST00000615680 HSP90B1P14625 803 aaKnown RBP8.69□□□□□ -1.02
DCLK1-208ENST00000615680 RBM33Q96EV2 1170 aaKnown RBP8.69□□□□□ -1.02
DCLK1-208ENST00000615680 CNKSR2Q8WXI2 1034 aa8.68□□□□□ -1.02
DCLK1-208ENST00000615680 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
DCLK1-208ENST00000615680 TOP2AP11388 1531 aaKnown RBP8.68□□□□□ -1.02
DCLK1-208ENST00000615680 MROH2BQ7Z745 1585 aa8.68□□□□□ -1.02
DCLK1-208ENST00000615680 VPS8Q8N3P4 1428 aa8.68□□□□□ -1.02
DCLK1-208ENST00000615680 TRIM6-TRIM34B2RNG4 842 aa8.68□□□□□ -1.02
DCLK1-208ENST00000615680 SMC4Q9NTJ3 1288 aa8.68□□□□□ -1.02
DCLK1-208ENST00000615680 RWDD1Q9H446 243 aaPredicted RBP8.68□□□□□ -1.02
DCLK1-208ENST00000615680 SUPT16HQ9Y5B9 1047 aaKnown RBP8.68□□□□□ -1.02
DCLK1-208ENST00000615680 KIF3AQ9Y496 699 aa8.67□□□□□ -1.02
DCLK1-208ENST00000615680 CGNL1Q0VF96 1302 aa8.67□□□□□ -1.02
DCLK1-208ENST00000615680 CHMP4CQ96CF2 233 aa8.67□□□□□ -1.02
DCLK1-208ENST00000615680 CEP89Q96ST8 783 aa8.67□□□□□ -1.02
DCLK1-208ENST00000615680 FHOD3Q2V2M9 1422 aa8.67□□□□□ -1.02
DCLK1-208ENST00000615680 DDX58O95786 925 aaKnown RBP8.66□□□□□ -1.02
DCLK1-208ENST00000615680 HSPA5P11021 654 aaKnown RBP8.66□□□□□ -1.02
DCLK1-208ENST00000615680 RAD21O60216 631 aa8.66□□□□□ -1.02
DCLK1-208ENST00000615680 TPM4P67936 248 aa8.66□□□□□ -1.02
DCLK1-208ENST00000615680 AKAP17AQ02040 695 aaKnown RBP8.66□□□□□ -1.02
DCLK1-208ENST00000615680 DRC7Q8IY82 874 aa8.66□□□□□ -1.02
DCLK1-208ENST00000615680 PPP1R1BQ9UD71 204 aaPredicted RBP8.65□□□□□ -1.02
DCLK1-208ENST00000615680 ATAD2BQ9ULI0 1458 aa8.65□□□□□ -1.02
DCLK1-208ENST00000615680 PROSER2Q86WR7 435 aaPredicted RBP8.65□□□□□ -1.02
DCLK1-208ENST00000615680 GPRASP1Q5JY77 1395 aa8.65□□□□□ -1.02
DCLK1-208ENST00000615680 MINK1Q8N4C8 1332 aaPredicted RBP8.65□□□□□ -1.02
DCLK1-208ENST00000615680 POGZQ7Z3K3 1410 aa8.65□□□□□ -1.03
DCLK1-208ENST00000615680 NOC3LQ8WTT2 800 aaKnown RBP8.64□□□□□ -1.03
DCLK1-208ENST00000615680 GAPVD1Q14C86 1478 aa8.64□□□□□ -1.03
DCLK1-208ENST00000615680 NGEFQ8N5V2 710 aa8.64□□□□□ -1.03
DCLK1-208ENST00000615680 PPP4R2Q9NY27 417 aa8.64□□□□□ -1.03
DCLK1-208ENST00000615680 PRDM2Q13029 1718 aa8.64□□□□□ -1.03
DCLK1-208ENST00000615680 SYNE3Q6ZMZ3 975 aa8.64□□□□□ -1.03
DCLK1-208ENST00000615680 CCAR1Q8IX12 1150 aaKnown RBP8.64□□□□□ -1.03
DCLK1-208ENST00000615680 PMFBP1Q8TBY8 1022 aa8.64□□□□□ -1.03
DCLK1-208ENST00000615680 THEMISQ8N1K5 641 aaPredicted RBP8.63□□□□□ -1.03
DCLK1-208ENST00000615680 C9orf78Q9NZ63 289 aaPredicted RBP8.63□□□□□ -1.03
DCLK1-208ENST00000615680 NLRP2Q9NX02 1062 aa8.63□□□□□ -1.03
DCLK1-208ENST00000615680 DHX57Q6P158 1386 aaKnown RBP8.62□□□□□ -1.03
DCLK1-208ENST00000615680 CSPP1Q1MSJ5 1256 aa8.62□□□□□ -1.03
DCLK1-208ENST00000615680 PIP4K2BP78356 416 aa8.62□□□□□ -1.03
DCLK1-208ENST00000615680 B4GALNT3Q6L9W6 998 aa8.62□□□□□ -1.03
DCLK1-208ENST00000615680 NUTM2BA6NNL0 878 aaPredicted RBP8.61□□□□□ -1.03
DCLK1-208ENST00000615680 NUTM2EB1AL46 878 aaPredicted RBP8.61□□□□□ -1.03
DCLK1-208ENST00000615680 NUTM2AQ8IVF1 878 aaPredicted RBP8.61□□□□□ -1.03
DCLK1-208ENST00000615680 PHLDB1Q86UU1 1377 aa8.61□□□□□ -1.03
DCLK1-208ENST00000615680 PTMSP20962 102 aa8.61□□□□□ -1.03
DCLK1-208ENST00000615680 WIZO95785 1651 aa8.61□□□□□ -1.03
DCLK1-208ENST00000615680 MYO15BQ96JP2 1530 aa8.61□□□□□ -1.03
DCLK1-208ENST00000615680 TXNDC2Q86VQ3 553 aa8.61□□□□□ -1.03
DCLK1-208ENST00000615680 CCDC43Q96MW1 224 aaKnown RBP8.61□□□□□ -1.03
DCLK1-208ENST00000615680 MIA2Q96PC5 1412 aa8.61□□□□□ -1.03
DCLK1-208ENST00000615680 EIF2S2P20042 333 aaKnown RBP8.6□□□□□ -1.03
DCLK1-208ENST00000615680 CPLX2Q6PUV4 134 aaKnown RBP8.6□□□□□ -1.03
DCLK1-208ENST00000615680 DHX16O60231 1041 aaKnown RBP8.6□□□□□ -1.03
DCLK1-208ENST00000615680 WWC1Q8IX03 1113 aa8.6□□□□□ -1.03
DCLK1-208ENST00000615680 SMARCA4P51532 1647 aa8.6□□□□□ -1.03
DCLK1-208ENST00000615680 KIF16BQ96L93 1317 aa8.59□□□□□ -1.03
DCLK1-208ENST00000615680 ESCO1Q5FWF5 840 aa8.59□□□□□ -1.03
DCLK1-208ENST00000615680 SYAP1Q96A49 352 aaPredicted RBP8.59□□□□□ -1.03
DCLK1-208ENST00000615680 ANKLE2Q86XL3 938 aa8.59□□□□□ -1.03
DCLK1-208ENST00000615680 STAC3Q96MF2 364 aa8.59□□□□□ -1.03
DCLK1-208ENST00000615680 KANK4Q5T7N3 995 aaPredicted RBP8.59□□□□□ -1.03
DCLK1-208ENST00000615680 CENPJQ9HC77 1338 aaPredicted RBP8.58□□□□□ -1.04
DCLK1-208ENST00000615680 USP35Q9P2H5 1018 aa8.58□□□□□ -1.04
DCLK1-208ENST00000615680 SF3A1Q15459 793 aaKnown RBP8.58□□□□□ -1.04
DCLK1-208ENST00000615680 NLRP13Q86W25 1043 aa8.58□□□□□ -1.04
DCLK1-208ENST00000615680 RAB3GAP2Q9H2M9 1393 aa8.58□□□□□ -1.04
DCLK1-208ENST00000615680 APPP05067 770 aa8.58□□□□□ -1.04
DCLK1-208ENST00000615680 STRN4Q9NRL3 753 aa8.58□□□□□ -1.04
DCLK1-208ENST00000615680 RCAN3Q9UKA8 241 aa8.57□□□□□ -1.04
DCLK1-208ENST00000615680 SMG6Q86US8 1419 aaKnown RBP8.57□□□□□ -1.04
DCLK1-208ENST00000615680 CCER2I3L3R5 266 aa8.57□□□□□ -1.04
DCLK1-208ENST00000615680 GBP4Q96PP9 640 aa8.57□□□□□ -1.04
DCLK1-208ENST00000615680 PDE3BQ13370 1112 aa8.57□□□□□ -1.04
DCLK1-208ENST00000615680 CREBRFQ8IUR6 639 aa8.57□□□□□ -1.04
DCLK1-208ENST00000615680 CCDC146Q8IYE0 955 aa8.57□□□□□ -1.04
DCLK1-208ENST00000615680 DIAPH1O60610 1272 aaKnown RBP8.57□□□□□ -1.04
DCLK1-208ENST00000615680 TPM2P07951 284 aa8.57□□□□□ -1.04
DCLK1-208ENST00000615680 KIF6Q6ZMV9 814 aa8.57□□□□□ -1.04
DCLK1-208ENST00000615680 NLRP6P59044 892 aa8.57□□□□□ -1.04
DCLK1-208ENST00000615680 TRDNQ13061 729 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms