RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 SF3A1Q15459 793 aaKnown RBP12.22□□□□□ -0.45
SHTN1-207ENST00000615301 COG6Q9Y2V7 657 aa12.22□□□□□ -0.45
SHTN1-207ENST00000615301 ANKRD45Q5TZF3 282 aa12.22□□□□□ -0.45
SHTN1-207ENST00000615301 KIF16BQ96L93 1317 aa12.22□□□□□ -0.45
SHTN1-207ENST00000615301 HMMRO75330 724 aa12.22□□□□□ -0.45
SHTN1-207ENST00000615301 CSB-PGBD3P0DP91 1061 aa12.22□□□□□ -0.45
SHTN1-207ENST00000615301 NUP155O75694 1391 aa12.22□□□□□ -0.45
SHTN1-207ENST00000615301 ZNF771Q7L3S4 317 aaPredicted RBP12.22□□□□□ -0.45
SHTN1-207ENST00000615301 EIF4G1Q04637 1599 aaKnown RBP12.21□□□□□ -0.45
SHTN1-207ENST00000615301 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.46
SHTN1-207ENST00000615301 PATL2C9JE40 543 aaKnown RBP12.21□□□□□ -0.46
SHTN1-207ENST00000615301 PHF14O94880 888 aa12.21□□□□□ -0.46
SHTN1-207ENST00000615301 TPM3P06753 285 aa12.2□□□□□ -0.46
SHTN1-207ENST00000615301 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
SHTN1-207ENST00000615301 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
SHTN1-207ENST00000615301 ARHGAP35Q9NRY4 1499 aa12.2□□□□□ -0.46
SHTN1-207ENST00000615301 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
SHTN1-207ENST00000615301 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
SHTN1-207ENST00000615301 CENPQQ7L2Z9 268 aaPredicted RBP12.19□□□□□ -0.46
SHTN1-207ENST00000615301 GPATCH3Q96I76 525 aa12.19□□□□□ -0.46
SHTN1-207ENST00000615301 TAF7LQ5H9L4 462 aa12.19□□□□□ -0.46
SHTN1-207ENST00000615301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHTN1-207ENST00000615301 VPS8Q8N3P4 1428 aa12.19□□□□□ -0.46
SHTN1-207ENST00000615301 CARMIL1Q5VZK9 1371 aa12.19□□□□□ -0.46
SHTN1-207ENST00000615301 SPAG9O60271 1321 aaKnown RBP12.18□□□□□ -0.46
SHTN1-207ENST00000615301 PDE3BQ13370 1112 aa12.18□□□□□ -0.46
SHTN1-207ENST00000615301 PRM3Q9NNZ6 103 aa12.18□□□□□ -0.46
SHTN1-207ENST00000615301 BECN2A8MW95 431 aa12.18□□□□□ -0.46
SHTN1-207ENST00000615301 H3BQV1 296 aa12.18□□□□□ -0.46
SHTN1-207ENST00000615301 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
SHTN1-207ENST00000615301 GOLGA6L19H0YKK7 550 aa12.17□□□□□ -0.46
SHTN1-207ENST00000615301 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
SHTN1-207ENST00000615301 WWC1Q8IX03 1113 aa12.16□□□□□ -0.46
SHTN1-207ENST00000615301 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
SHTN1-207ENST00000615301 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
SHTN1-207ENST00000615301 PANK3Q9H999 370 aa12.16□□□□□ -0.46
SHTN1-207ENST00000615301 MCTP1Q6DN14 999 aa12.16□□□□□ -0.46
SHTN1-207ENST00000615301 FANCIQ9NVI1 1328 aa12.16□□□□□ -0.46
SHTN1-207ENST00000615301 CUX2O14529 1486 aa12.15□□□□□ -0.47
SHTN1-207ENST00000615301 PRKRIP1Q9H875 184 aaPredicted RBP12.15□□□□□ -0.47
SHTN1-207ENST00000615301 FAM184AQ8NB25 1140 aa12.14□□□□□ -0.47
SHTN1-207ENST00000615301 TPD52L1Q16890 204 aaPredicted RBP12.14□□□□□ -0.47
SHTN1-207ENST00000615301 TRAK1Q9UPV9 953 aa12.14□□□□□ -0.47
SHTN1-207ENST00000615301 MYBBP1AQ9BQG0 1328 aaKnown RBP12.14□□□□□ -0.47
SHTN1-207ENST00000615301 SKOR2Q2VWA4 1001 aaPredicted RBP12.13□□□□□ -0.47
SHTN1-207ENST00000615301 VPS53Q5VIR6 699 aa12.13□□□□□ -0.47
SHTN1-207ENST00000615301 APAF1O14727 1248 aa12.12□□□□□ -0.47
SHTN1-207ENST00000615301 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
SHTN1-207ENST00000615301 ZKSCAN2Q63HK3 967 aa12.12□□□□□ -0.47
SHTN1-207ENST00000615301 FAM43AQ8N2R8 423 aa12.12□□□□□ -0.47
SHTN1-207ENST00000615301 NFKBIBQ15653 356 aa12.11□□□□□ -0.47
SHTN1-207ENST00000615301 BRPF3Q9ULD4 1205 aa12.11□□□□□ -0.47
SHTN1-207ENST00000615301 MARCH6O60337 910 aa12.11□□□□□ -0.47
SHTN1-207ENST00000615301 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
SHTN1-207ENST00000615301 FOSBP53539 338 aa12.11□□□□□ -0.47
SHTN1-207ENST00000615301 HNRNPMP52272 730 aaKnown RBP eCLIP12.11□□□□□ -0.47
SHTN1-207ENST00000615301 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
SHTN1-207ENST00000615301 CEP89Q96ST8 783 aa12.11□□□□□ -0.47
SHTN1-207ENST00000615301 TERF2IPQ9NYB0 399 aa12.11□□□□□ -0.47
SHTN1-207ENST00000615301 KIF15Q9NS87 1388 aa12.1□□□□□ -0.47
SHTN1-207ENST00000615301 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
SHTN1-207ENST00000615301 AMPHP49418 695 aa12.1□□□□□ -0.47
SHTN1-207ENST00000615301 SETQ01105 290 aaPredicted RBP12.1□□□□□ -0.47
SHTN1-207ENST00000615301 ZBED9Q6R2W3 1325 aa12.1□□□□□ -0.47
SHTN1-207ENST00000615301 HOMER1Q86YM7 354 aa12.1□□□□□ -0.47
SHTN1-207ENST00000615301 R3HCC1Q9Y3T6 440 aaKnown RBP12.1□□□□□ -0.47
SHTN1-207ENST00000615301 KIF3BO15066 747 aa12.1□□□□□ -0.47
SHTN1-207ENST00000615301 IL27Q8NEV9 243 aa12.1□□□□□ -0.47
SHTN1-207ENST00000615301 CHMP5Q9NZZ3 219 aa12.09□□□□□ -0.47
SHTN1-207ENST00000615301 KIF3AQ9Y496 699 aa12.09□□□□□ -0.47
SHTN1-207ENST00000615301 RNF214Q8ND24 703 aa12.09□□□□□ -0.47
SHTN1-207ENST00000615301 FMN1Q68DA7 1419 aa12.09□□□□□ -0.47
SHTN1-207ENST00000615301 NGEFQ8N5V2 710 aa12.08□□□□□ -0.47
SHTN1-207ENST00000615301 BICD2Q8TD16 824 aa12.08□□□□□ -0.48
SHTN1-207ENST00000615301 VPS37CA5D8V6 355 aaPredicted RBP12.08□□□□□ -0.48
SHTN1-207ENST00000615301 ATP6V1DQ9Y5K8 247 aa12.08□□□□□ -0.48
SHTN1-207ENST00000615301 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
SHTN1-207ENST00000615301 DIAPH3Q9NSV4 1193 aa12.08□□□□□ -0.48
SHTN1-207ENST00000615301 NGDNQ8NEJ9 315 aaKnown RBP12.08□□□□□ -0.48
SHTN1-207ENST00000615301 E9PSI1 815 aa12.07□□□□□ -0.48
SHTN1-207ENST00000615301 ANO2Q9NQ90 1003 aa12.07□□□□□ -0.48
SHTN1-207ENST00000615301 EIF3AQ14152 1382 aaKnown RBP12.07□□□□□ -0.48
SHTN1-207ENST00000615301 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
SHTN1-207ENST00000615301 LNPKQ9C0E8 428 aa12.07□□□□□ -0.48
SHTN1-207ENST00000615301 IFT57Q9NWB7 429 aa12.06□□□□□ -0.48
SHTN1-207ENST00000615301 LMOD3Q0VAK6 560 aa12.06□□□□□ -0.48
SHTN1-207ENST00000615301 CGNL1Q0VF96 1302 aa12.06□□□□□ -0.48
SHTN1-207ENST00000615301 PCMTD1Q96MG8 357 aaPredicted RBP12.06□□□□□ -0.48
SHTN1-207ENST00000615301 ABCC8Q09428 1581 aa12.06□□□□□ -0.48
SHTN1-207ENST00000615301 ANKRD30AQ9BXX3 1397 aa12.06□□□□□ -0.48
SHTN1-207ENST00000615301 EIF2S2P20042 333 aaKnown RBP12.05□□□□□ -0.48
SHTN1-207ENST00000615301 GPS2Q13227 327 aa12.05□□□□□ -0.48
SHTN1-207ENST00000615301 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.05□□□□□ -0.48
SHTN1-207ENST00000615301 HDAC5Q9UQL6 1122 aa12.05□□□□□ -0.48
SHTN1-207ENST00000615301 PHLDB1Q86UU1 1377 aa12.04□□□□□ -0.48
SHTN1-207ENST00000615301 CCDC88BA6NC98 1476 aa12.04□□□□□ -0.48
SHTN1-207ENST00000615301 CECR2Q9BXF3 1484 aa12.04□□□□□ -0.48
SHTN1-207ENST00000615301 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
SHTN1-207ENST00000615301 TPM1P09493 284 aa12.04□□□□□ -0.48
SHTN1-207ENST00000615301 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms