RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 MAGI2Q86UL8 1455 aa13.38□□□□□ -0.27
RDM1-218ENST00000615288 NOP58Q9Y2X3 529 aaKnown RBP13.38□□□□□ -0.27
RDM1-218ENST00000615288 FAM135AQ9P2D6 1515 aa13.38□□□□□ -0.27
RDM1-218ENST00000615288 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
RDM1-218ENST00000615288 COL17A1Q9UMD9 1497 aaPredicted RBP13.37□□□□□ -0.27
RDM1-218ENST00000615288 PARD3Q8TEW0 1356 aa13.37□□□□□ -0.27
RDM1-218ENST00000615288 FOXD1Q16676 465 aa13.37□□□□□ -0.27
RDM1-218ENST00000615288 PKD2Q13563 968 aa13.36□□□□□ -0.27
RDM1-218ENST00000615288 PRAG1Q86YV5 1406 aa13.36□□□□□ -0.27
RDM1-218ENST00000615288 ANP32AP39687 249 aaKnown RBP13.35□□□□□ -0.27
RDM1-218ENST00000615288 IRX6P78412 446 aaPredicted RBP13.35□□□□□ -0.27
RDM1-218ENST00000615288 NUP155O75694 1391 aa13.34□□□□□ -0.27
RDM1-218ENST00000615288 SAMD9LQ8IVG5 1584 aa13.34□□□□□ -0.27
RDM1-218ENST00000615288 BLMP54132 1417 aaPredicted RBP13.34□□□□□ -0.27
RDM1-218ENST00000615288 ATP10BO94823 1461 aa13.34□□□□□ -0.27
RDM1-218ENST00000615288 MS4A1P11836 297 aa13.33□□□□□ -0.28
RDM1-218ENST00000615288 B4GALNT3Q6L9W6 998 aa13.33□□□□□ -0.28
RDM1-218ENST00000615288 TMC1Q8TDI8 760 aa13.33□□□□□ -0.28
RDM1-218ENST00000615288 CCDC136Q96JN2 1154 aa13.33□□□□□ -0.28
RDM1-218ENST00000615288 NLRP13Q86W25 1043 aa13.32□□□□□ -0.28
RDM1-218ENST00000615288 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
RDM1-218ENST00000615288 NEURL4Q96JN8 1562 aa13.32□□□□□ -0.28
RDM1-218ENST00000615288 TCERG1O14776 1098 aaKnown RBP13.31□□□□□ -0.28
RDM1-218ENST00000615288 CARD11Q9BXL7 1154 aa13.31□□□□□ -0.28
RDM1-218ENST00000615288 CDC42BPBQ9Y5S2 1711 aa13.3□□□□□ -0.28
RDM1-218ENST00000615288 IPO9Q96P70 1041 aaKnown RBP13.3□□□□□ -0.28
RDM1-218ENST00000615288 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
RDM1-218ENST00000615288 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
RDM1-218ENST00000615288 ERBINQ96RT1 1412 aa13.29□□□□□ -0.28
RDM1-218ENST00000615288 DUOX2Q9NRD8 1548 aa13.29□□□□□ -0.28
RDM1-218ENST00000615288 MYO5CQ9NQX4 1742 aa13.28□□□□□ -0.28
RDM1-218ENST00000615288 TSPY4P0CV99 314 aa13.28□□□□□ -0.28
RDM1-218ENST00000615288 TSPY10P0CW01 314 aa13.28□□□□□ -0.28
RDM1-218ENST00000615288 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
RDM1-218ENST00000615288 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
RDM1-218ENST00000615288 A2MP01023 1474 aa13.26□□□□□ -0.29
RDM1-218ENST00000615288 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
RDM1-218ENST00000615288 USP35Q9P2H5 1018 aa13.26□□□□□ -0.29
RDM1-218ENST00000615288 IQGAP1P46940 1657 aa13.25□□□□□ -0.29
RDM1-218ENST00000615288 SYNMO15061 1565 aa13.25□□□□□ -0.29
RDM1-218ENST00000615288 STAC3Q96MF2 364 aa13.25□□□□□ -0.29
RDM1-218ENST00000615288 ARAP3Q8WWN8 1544 aa13.24□□□□□ -0.29
RDM1-218ENST00000615288 CHMP7Q8WUX9 453 aaPredicted RBP13.24□□□□□ -0.29
RDM1-218ENST00000615288 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
RDM1-218ENST00000615288 KIAA1210Q9ULL0 1709 aa13.24□□□□□ -0.29
RDM1-218ENST00000615288 RCAN3Q9UKA8 241 aa13.22□□□□□ -0.29
RDM1-218ENST00000615288 SYCP2Q9BX26 1530 aa13.22□□□□□ -0.29
RDM1-218ENST00000615288 PLA2R1Q13018 1463 aa13.22□□□□□ -0.29
RDM1-218ENST00000615288 NPC1L1Q9UHC9 1359 aa13.21□□□□□ -0.29
RDM1-218ENST00000615288 ST20-MTHFSA0A0A6YYL1 179 aa13.21□□□□□ -0.29
RDM1-218ENST00000615288 DEKP35659 375 aaKnown RBP13.21□□□□□ -0.29
RDM1-218ENST00000615288 SPHKAPQ2M3C7 1700 aa13.21□□□□□ -0.3
RDM1-218ENST00000615288 SCAPERQ9BY12 1400 aa13.21□□□□□ -0.3
RDM1-218ENST00000615288 MADDQ8WXG6 1647 aa13.21□□□□□ -0.3
RDM1-218ENST00000615288 TRPM2O94759 1503 aa13.2□□□□□ -0.3
RDM1-218ENST00000615288 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
RDM1-218ENST00000615288 TTC37Q6PGP7 1564 aa13.2□□□□□ -0.3
RDM1-218ENST00000615288 ABCC2Q92887 1545 aa13.19□□□□□ -0.3
RDM1-218ENST00000615288 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
RDM1-218ENST00000615288 RTL5Q5HYW3 569 aaPredicted RBP13.19□□□□□ -0.3
RDM1-218ENST00000615288 DEPDC5O75140 1603 aa13.19□□□□□ -0.3
RDM1-218ENST00000615288 CEP152O94986 1710 aa13.19□□□□□ -0.3
RDM1-218ENST00000615288 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
RDM1-218ENST00000615288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
RDM1-218ENST00000615288 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
RDM1-218ENST00000615288 PIK3C2GO75747 1445 aa13.18□□□□□ -0.3
RDM1-218ENST00000615288 ARHGAP5Q13017 1502 aa13.18□□□□□ -0.3
RDM1-218ENST00000615288 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
RDM1-218ENST00000615288 ZNF326Q5BKZ1 582 aaKnown RBP13.17□□□□□ -0.3
RDM1-218ENST00000615288 NGEFQ8N5V2 710 aa13.17□□□□□ -0.3
RDM1-218ENST00000615288 DDRGK1Q96HY6 314 aa13.17□□□□□ -0.3
RDM1-218ENST00000615288 ZNF777Q9ULD5 760 aaPredicted RBP13.17□□□□□ -0.3
RDM1-218ENST00000615288 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
RDM1-218ENST00000615288 ABCC1P33527 1531 aa13.16□□□□□ -0.3
RDM1-218ENST00000615288 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
RDM1-218ENST00000615288 RTEL1-TNFRSF6BF6WH68 1400 aa13.15□□□□□ -0.3
RDM1-218ENST00000615288 PPM1GO15355 546 aaPredicted RBP13.15□□□□□ -0.3
RDM1-218ENST00000615288 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
RDM1-218ENST00000615288 UHRF1BP1LA0JNW5 1464 aa13.15□□□□□ -0.3
RDM1-218ENST00000615288 TMF1P82094 1093 aa13.14□□□□□ -0.31
RDM1-218ENST00000615288 CDCA8Q53HL2 280 aa13.14□□□□□ -0.31
RDM1-218ENST00000615288 TESK2Q96S53 571 aa13.14□□□□□ -0.31
RDM1-218ENST00000615288 BACH2Q9BYV9 841 aa13.14□□□□□ -0.31
RDM1-218ENST00000615288 TET3O43151 1660 aa13.14□□□□□ -0.31
RDM1-218ENST00000615288 NINLQ9Y2I6 1382 aa13.13□□□□□ -0.31
RDM1-218ENST00000615288 ASXL1Q8IXJ9 1541 aa13.13□□□□□ -0.31
RDM1-218ENST00000615288 SCAF11Q99590 1463 aaKnown RBP13.12□□□□□ -0.31
RDM1-218ENST00000615288 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
RDM1-218ENST00000615288 PTPRTO14522 1441 aa13.12□□□□□ -0.31
RDM1-218ENST00000615288 MYOM1P52179 1685 aa13.12□□□□□ -0.31
RDM1-218ENST00000615288 VWDEQ8N2E2 1590 aa13.11□□□□□ -0.31
RDM1-218ENST00000615288 DISP3Q9P2K9 1392 aa13.11□□□□□ -0.31
RDM1-218ENST00000615288 MYO3AQ8NEV4 1616 aa13.11□□□□□ -0.31
RDM1-218ENST00000615288 KDM5AP29375 1690 aaKnown RBP13.11□□□□□ -0.31
RDM1-218ENST00000615288 MYOM2P54296 1465 aa13.1□□□□□ -0.31
RDM1-218ENST00000615288 ZMYM3Q14202 1370 aa13.1□□□□□ -0.31
RDM1-218ENST00000615288 PDE4AP27815 886 aa13.1□□□□□ -0.31
RDM1-218ENST00000615288 POLR3GLQ9BT43 218 aa13.1□□□□□ -0.31
RDM1-218ENST00000615288 PLCH2O75038 1416 aa13.1□□□□□ -0.31
RDM1-218ENST00000615288 CENPQQ7L2Z9 268 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms