RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 MAP3K9P80192 1104 aa2.53□□□□□ -2
BRCA2-207ENST00000614259 SOGA3Q5TF21 947 aa2.53□□□□□ -2
BRCA2-207ENST00000614259 NCKAP5LQ9HCH0 1330 aa2.53□□□□□ -2
BRCA2-207ENST00000614259 EFCAB3Q8N7B9 438 aa2.53□□□□□ -2
BRCA2-207ENST00000614259 TTC13Q8NBP0 860 aa2.53□□□□□ -2
BRCA2-207ENST00000614259 OXER1Q8TDS5 423 aa2.53□□□□□ -2
BRCA2-207ENST00000614259 SULF1Q8IWU6 871 aa2.53□□□□□ -2
BRCA2-207ENST00000614259 PBXIP1Q96AQ6 731 aa2.53□□□□□ -2
BRCA2-207ENST00000614259 PUS7Q96PZ0 661 aaKnown RBP2.53□□□□□ -2
BRCA2-207ENST00000614259 HSP90B1P14625 803 aaKnown RBP2.53□□□□□ -2
BRCA2-207ENST00000614259 TYW1BQ6NUM6 668 aa2.53□□□□□ -2
BRCA2-207ENST00000614259 RBM46Q8TBY0 533 aaKnown RBP2.53□□□□□ -2
BRCA2-207ENST00000614259 GPR37O15354 613 aa2.53□□□□□ -2.01
BRCA2-207ENST00000614259 PYGBP11216 843 aa2.53□□□□□ -2.01
BRCA2-207ENST00000614259 SPTLC1O15269 473 aa2.52□□□□□ -2.01
BRCA2-207ENST00000614259 CSB-PGBD3P0DP91 1061 aa2.52□□□□□ -2.01
BRCA2-207ENST00000614259 ARMC5Q96C12 935 aa2.52□□□□□ -2.01
BRCA2-207ENST00000614259 ATG7O95352 703 aa2.52□□□□□ -2.01
BRCA2-207ENST00000614259 SIRT1Q96EB6 747 aa2.52□□□□□ -2.01
BRCA2-207ENST00000614259 PLEKHG3A1L390 1219 aa2.52□□□□□ -2.01
BRCA2-207ENST00000614259 NCLP19338 710 aaKnown RBP2.52□□□□□ -2.01
BRCA2-207ENST00000614259 TRIM26Q12899 539 aaPredicted RBP2.52□□□□□ -2.01
BRCA2-207ENST00000614259 C1orf216Q8TAB5 229 aa2.52□□□□□ -2.01
BRCA2-207ENST00000614259 GPSM3Q9Y4H4 160 aa2.52□□□□□ -2.01
BRCA2-207ENST00000614259 MCM6Q14566 821 aa2.51□□□□□ -2.01
BRCA2-207ENST00000614259 GPKOWQ92917 476 aaPredicted RBP eCLIP2.51□□□□□ -2.01
BRCA2-207ENST00000614259 PLSCR2Q9NRY7 297 aa2.51□□□□□ -2.01
BRCA2-207ENST00000614259 FRMD6Q96NE9 622 aa2.51□□□□□ -2.01
BRCA2-207ENST00000614259 GRIPAP1Q4V328 841 aa2.51□□□□□ -2.01
BRCA2-207ENST00000614259 CCER1Q8TC90 406 aaPredicted RBP2.51□□□□□ -2.01
BRCA2-207ENST00000614259 OCEL1Q9H607 264 aa2.51□□□□□ -2.01
BRCA2-207ENST00000614259 SUPT5HO00267 1087 aaKnown RBP2.51□□□□□ -2.01
BRCA2-207ENST00000614259 SLC4A3P48751 1232 aa2.51□□□□□ -2.01
BRCA2-207ENST00000614259 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.51□□□□□ -2.01
BRCA2-207ENST00000614259 PHF8Q9UPP1 1060 aa2.51□□□□□ -2.01
BRCA2-207ENST00000614259 KIF3CO14782 793 aa2.51□□□□□ -2.01
BRCA2-207ENST00000614259 BRINP2Q9C0B6 783 aa2.51□□□□□ -2.01
BRCA2-207ENST00000614259 IL27Q8NEV9 243 aa2.5□□□□□ -2.01
BRCA2-207ENST00000614259 RBM47A0AV96 593 aaKnown RBP2.5□□□□□ -2.01
BRCA2-207ENST00000614259 RBM10P98175 930 aaKnown RBP2.5□□□□□ -2.01
BRCA2-207ENST00000614259 PARP9Q8IXQ6 854 aa2.5□□□□□ -2.01
BRCA2-207ENST00000614259 OSBPP22059 807 aa2.5□□□□□ -2.01
BRCA2-207ENST00000614259 EGFL7Q9UHF1 273 aa2.5□□□□□ -2.01
BRCA2-207ENST00000614259 RGS22Q8NE09 1264 aa2.49□□□□□ -2.01
BRCA2-207ENST00000614259 CCDC102AQ96A19 550 aa2.49□□□□□ -2.01
BRCA2-207ENST00000614259 DESI1Q6ICB0 168 aa2.49□□□□□ -2.01
BRCA2-207ENST00000614259 PLEKHM2Q8IWE5 1019 aa2.49□□□□□ -2.01
BRCA2-207ENST00000614259 CABP2Q9NPB3 220 aa2.49□□□□□ -2.01
BRCA2-207ENST00000614259 PRR14Q9BWN1 585 aa2.49□□□□□ -2.01
BRCA2-207ENST00000614259 HRCP23327 699 aa2.49□□□□□ -2.01
BRCA2-207ENST00000614259 SSTR3P32745 418 aaPredicted RBP2.49□□□□□ -2.01
BRCA2-207ENST00000614259 CITED4Q96RK1 184 aa2.49□□□□□ -2.01
BRCA2-207ENST00000614259 CLK2P49760 499 aaKnown RBP2.49□□□□□ -2.01
BRCA2-207ENST00000614259 PTGDRQ13258 359 aa2.48□□□□□ -2.01
BRCA2-207ENST00000614259 IFNL1Q8IU54 200 aa2.48□□□□□ -2.01
BRCA2-207ENST00000614259 SND1Q7KZF4 910 aaKnown RBP eCLIP2.48□□□□□ -2.01
BRCA2-207ENST00000614259 CLEC11AQ9Y240 323 aa2.48□□□□□ -2.01
BRCA2-207ENST00000614259 SF3A1Q15459 793 aaKnown RBP2.48□□□□□ -2.01
BRCA2-207ENST00000614259 SLC4A5Q9BY07 1137 aa2.48□□□□□ -2.01
BRCA2-207ENST00000614259 FAM217BQ9NTX9 383 aaPredicted RBP2.48□□□□□ -2.01
BRCA2-207ENST00000614259 NDUFB9Q9Y6M9 179 aa2.48□□□□□ -2.01
BRCA2-207ENST00000614259 MFAP1P55081 439 aaKnown RBP2.48□□□□□ -2.01
BRCA2-207ENST00000614259 JPH4Q96JJ6 628 aa2.48□□□□□ -2.01
BRCA2-207ENST00000614259 PCDHB8Q9UN66 801 aa2.48□□□□□ -2.01
BRCA2-207ENST00000614259 PITPNM1O00562 1244 aa2.48□□□□□ -2.01
BRCA2-207ENST00000614259 CACNB1Q02641 598 aaPredicted RBP2.48□□□□□ -2.01
BRCA2-207ENST00000614259 ARMC2Q8NEN0 867 aa2.48□□□□□ -2.01
BRCA2-207ENST00000614259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.48□□□□□ -2.01
BRCA2-207ENST00000614259 ARID4AP29374 1257 aaPredicted RBP2.47□□□□□ -2.01
BRCA2-207ENST00000614259 TMEM106CQ9BVX2 250 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 NUTM2FA1L443 756 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 GAS2L2Q8NHY3 880 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 FAM117AQ9C073 453 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.47□□□□□ -2.013e-6■■■■■ 27.2
BRCA2-207ENST00000614259 CDCA7Q9BWT1 371 aaPredicted RBP2.47□□□□□ -2.01
BRCA2-207ENST00000614259 SALL2Q9Y467 1007 aaPredicted RBP2.47□□□□□ -2.01
BRCA2-207ENST00000614259 PPP1R37O75864 691 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 TCF3P15923 654 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 RBM26Q5T8P6 1007 aaKnown RBP2.47□□□□□ -2.01
BRCA2-207ENST00000614259 GIGYF2Q6Y7W6 1299 aaKnown RBP2.47□□□□□ -2.01
BRCA2-207ENST00000614259 COL26A1Q96A83 441 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 VRTNQ9H8Y1 702 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 EIF4G2P78344 907 aaKnown RBP eCLIP2.47□□□□□ -2.01
BRCA2-207ENST00000614259 MAP7D1Q3KQU3 841 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 TTLL12Q14166 644 aaPredicted RBP2.47□□□□□ -2.01
BRCA2-207ENST00000614259 TSR1Q2NL82 804 aaKnown RBP2.47□□□□□ -2.01
BRCA2-207ENST00000614259 MS4A4AQ96JQ5 239 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 BOLA1Q9Y3E2 137 aa2.47□□□□□ -2.01
BRCA2-207ENST00000614259 PLPP6Q8IY26 295 aa2.46□□□□□ -2.02
BRCA2-207ENST00000614259 SLAIN1Q8ND83 568 aa2.46□□□□□ -2.02
BRCA2-207ENST00000614259 EN1Q05925 392 aaPredicted RBP2.46□□□□□ -2.02
BRCA2-207ENST00000614259 Q3C1V9 767 aa2.46□□□□□ -2.02
BRCA2-207ENST00000614259 MICALL2Q8IY33 904 aa2.46□□□□□ -2.02
BRCA2-207ENST00000614259 NLRP2Q9NX02 1062 aa2.46□□□□□ -2.02
BRCA2-207ENST00000614259 CCDC27Q2M243 656 aa2.46□□□□□ -2.02
BRCA2-207ENST00000614259 ZNF326Q5BKZ1 582 aaKnown RBP2.46□□□□□ -2.02
BRCA2-207ENST00000614259 TRIM50Q86XT4 487 aa2.46□□□□□ -2.02
BRCA2-207ENST00000614259 M0R2N6 131 aa2.46□□□□□ -2.02
BRCA2-207ENST00000614259 NEFLP07196 543 aa2.46□□□□□ -2.02
BRCA2-207ENST00000614259 RFC5P40937 340 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms