RNA–Protein interactions for RNA: ENST00000613707.1

GAPDHP41-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 41, humanhuman

BASIC

Gene GAPDHP41, Length 975 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP41-201ENST00000613707 FBXW7Q969H0 707 aa13.23□□□□□ -0.29
GAPDHP41-201ENST00000613707 ADAM33Q9BZ11 813 aa13.22□□□□□ -0.29
GAPDHP41-201ENST00000613707 SEMA3EO15041 775 aa13.21□□□□□ -0.29
GAPDHP41-201ENST00000613707 KCNH8Q96L42 1107 aa13.21□□□□□ -0.29
GAPDHP41-201ENST00000613707 BCL2L12Q9HB09 334 aa13.21□□□□□ -0.29
GAPDHP41-201ENST00000613707 AXIN2Q9Y2T1 843 aa13.21□□□□□ -0.29
GAPDHP41-201ENST00000613707 MLLT3P42568 568 aaPredicted RBP13.2□□□□□ -0.3
GAPDHP41-201ENST00000613707 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
GAPDHP41-201ENST00000613707 KCNK17Q96T54 332 aa13.2□□□□□ -0.3
GAPDHP41-201ENST00000613707 NCAPD3P42695 1498 aa13.2□□□□□ -0.3
GAPDHP41-201ENST00000613707 ARHGAP33O14559 1287 aa13.19□□□□□ -0.3
GAPDHP41-201ENST00000613707 KRTAP3-3Q9BYR6 98 aa13.19□□□□□ -0.3
GAPDHP41-201ENST00000613707 KRTAP3-2Q9BYR7 98 aa13.19□□□□□ -0.3
GAPDHP41-201ENST00000613707 PTPREP23469 700 aa13.18□□□□□ -0.3
GAPDHP41-201ENST00000613707 POTEEQ6S8J3 1075 aa13.18□□□□□ -0.3
GAPDHP41-201ENST00000613707 PSEN2P49810 448 aa13.17□□□□□ -0.3
GAPDHP41-201ENST00000613707 MAP3K7O43318 606 aa13.16□□□□□ -0.3
GAPDHP41-201ENST00000613707 EN1Q05925 392 aaPredicted RBP13.16□□□□□ -0.3
GAPDHP41-201ENST00000613707 ATAD2BQ9ULI0 1458 aa13.15□□□□□ -0.3
GAPDHP41-201ENST00000613707 OSBPP22059 807 aa13.14□□□□□ -0.31
GAPDHP41-201ENST00000613707 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
GAPDHP41-201ENST00000613707 LSM11P83369 360 aaKnown RBP eCLIP13.13□□□□□ -0.31
GAPDHP41-201ENST00000613707 SMARCA4P51532 1647 aa13.12□□□□□ -0.31
GAPDHP41-201ENST00000613707 C6orf132Q5T0Z8 1188 aa13.11□□□□□ -0.31
GAPDHP41-201ENST00000613707 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
GAPDHP41-201ENST00000613707 ANKRD13DQ6ZTN6 518 aa13.11□□□□□ -0.31
GAPDHP41-201ENST00000613707 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
GAPDHP41-201ENST00000613707 SMYD5Q6GMV2 418 aa13.1□□□□□ -0.31
GAPDHP41-201ENST00000613707 TSR1Q2NL82 804 aaKnown RBP13.09□□□□□ -0.31
GAPDHP41-201ENST00000613707 HMGXB3Q12766 1538 aa13.08□□□□□ -0.31
GAPDHP41-201ENST00000613707 SMARCA2P51531 1590 aa13.08□□□□□ -0.32
GAPDHP41-201ENST00000613707 PPP1R3GB7ZBB8 358 aa13.08□□□□□ -0.32
GAPDHP41-201ENST00000613707 CUX2O14529 1486 aa13.07□□□□□ -0.32
GAPDHP41-201ENST00000613707 COL9A1P20849 921 aa13.06□□□□□ -0.32
GAPDHP41-201ENST00000613707 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
GAPDHP41-201ENST00000613707 TULP1O00294 542 aaPredicted RBP13.04□□□□□ -0.32
GAPDHP41-201ENST00000613707 CDHR5Q9HBB8 845 aa13.04□□□□□ -0.32
GAPDHP41-201ENST00000613707 BAZ1AQ9NRL2 1556 aaPredicted RBP13.03□□□□□ -0.32
GAPDHP41-201ENST00000613707 ADGRD1Q6QNK2 874 aa13.03□□□□□ -0.32
GAPDHP41-201ENST00000613707 TK2O00142 265 aa13.02□□□□□ -0.33
GAPDHP41-201ENST00000613707 ZBED2Q9BTP6 218 aa13.02□□□□□ -0.33
GAPDHP41-201ENST00000613707 NESP48681 1621 aa13.02□□□□□ -0.33
GAPDHP41-201ENST00000613707 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
GAPDHP41-201ENST00000613707 PEG3Q9GZU2 1588 aa13.01□□□□□ -0.33
GAPDHP41-201ENST00000613707 RBM26Q5T8P6 1007 aaKnown RBP13□□□□□ -0.33
GAPDHP41-201ENST00000613707 BAZ1BQ9UIG0 1483 aaKnown RBP12.99□□□□□ -0.33
GAPDHP41-201ENST00000613707 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
GAPDHP41-201ENST00000613707 SLC4A5Q9BY07 1137 aa12.99□□□□□ -0.33
GAPDHP41-201ENST00000613707 VPS9D1Q9Y2B5 631 aa12.99□□□□□ -0.33
GAPDHP41-201ENST00000613707 PROX2Q3B8N5 592 aa12.98□□□□□ -0.33
GAPDHP41-201ENST00000613707 SPNS2Q8IVW8 549 aa12.98□□□□□ -0.33
GAPDHP41-201ENST00000613707 MROH2BQ7Z745 1585 aa12.96□□□□□ -0.33
GAPDHP41-201ENST00000613707 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
GAPDHP41-201ENST00000613707 TRIM6-TRIM34B2RNG4 842 aa12.93□□□□□ -0.34
GAPDHP41-201ENST00000613707 CDCA7LQ96GN5 454 aa12.93□□□□□ -0.34
GAPDHP41-201ENST00000613707 HRO43593 1189 aa12.92□□□□□ -0.34
GAPDHP41-201ENST00000613707 PRSS12P56730 875 aa12.92□□□□□ -0.34
GAPDHP41-201ENST00000613707 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
GAPDHP41-201ENST00000613707 FCHSD2O94868 740 aa12.91□□□□□ -0.34
GAPDHP41-201ENST00000613707 PTGDRQ13258 359 aa12.91□□□□□ -0.34
GAPDHP41-201ENST00000613707 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
GAPDHP41-201ENST00000613707 RABGEF1Q9UJ41 708 aa12.91□□□□□ -0.34
GAPDHP41-201ENST00000613707 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.34
GAPDHP41-201ENST00000613707 GPIHBP1Q8IV16 184 aa12.9□□□□□ -0.34
GAPDHP41-201ENST00000613707 BCANQ96GW7 911 aa12.9□□□□□ -0.34
GAPDHP41-201ENST00000613707 NBPF3Q9H094 633 aa12.9□□□□□ -0.34
GAPDHP41-201ENST00000613707 KIAA1468Q9P260 1216 aa12.9□□□□□ -0.34
GAPDHP41-201ENST00000613707 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.35
GAPDHP41-201ENST00000613707 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
GAPDHP41-201ENST00000613707 TSKSQ9UJT2 592 aa12.89□□□□□ -0.35
GAPDHP41-201ENST00000613707 MYT1LQ9UL68 1186 aa12.89□□□□□ -0.35
GAPDHP41-201ENST00000613707 PACS2Q86VP3 889 aa12.88□□□□□ -0.35
GAPDHP41-201ENST00000613707 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
GAPDHP41-201ENST00000613707 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
GAPDHP41-201ENST00000613707 PADI6Q6TGC4 694 aa12.87□□□□□ -0.35
GAPDHP41-201ENST00000613707 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.87□□□□□ -0.35
GAPDHP41-201ENST00000613707 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
GAPDHP41-201ENST00000613707 BHMG1C9JSJ3 638 aaPredicted RBP12.86□□□□□ -0.35
GAPDHP41-201ENST00000613707 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
GAPDHP41-201ENST00000613707 MMRN1Q13201 1228 aa12.85□□□□□ -0.35
GAPDHP41-201ENST00000613707 FAM198AQ9UFP1 575 aa12.85□□□□□ -0.35
GAPDHP41-201ENST00000613707 HIC1Q14526 733 aa12.84□□□□□ -0.35
GAPDHP41-201ENST00000613707 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
GAPDHP41-201ENST00000613707 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
GAPDHP41-201ENST00000613707 SEPT9Q9UHD8 586 aaPredicted RBP12.83□□□□□ -0.36
GAPDHP41-201ENST00000613707 GPR37O15354 613 aa12.82□□□□□ -0.36
GAPDHP41-201ENST00000613707 RNF166Q96A37 237 aaPredicted RBP12.82□□□□□ -0.36
GAPDHP41-201ENST00000613707 WIZO95785 1651 aa12.81□□□□□ -0.36
GAPDHP41-201ENST00000613707 PNMA3Q9UL41 463 aa12.81□□□□□ -0.36
GAPDHP41-201ENST00000613707 GNPATO15228 680 aa12.8□□□□□ -0.36
GAPDHP41-201ENST00000613707 TTC13Q8NBP0 860 aa12.8□□□□□ -0.36
GAPDHP41-201ENST00000613707 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
GAPDHP41-201ENST00000613707 SMAPO00193 183 aa12.79□□□□□ -0.36
GAPDHP41-201ENST00000613707 LAPTM4BQ86VI4 370 aa12.79□□□□□ -0.36
GAPDHP41-201ENST00000613707 TATDN2Q93075 761 aa12.79□□□□□ -0.36
GAPDHP41-201ENST00000613707 NUDT18Q6ZVK8 323 aa12.78□□□□□ -0.36
GAPDHP41-201ENST00000613707 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
GAPDHP41-201ENST00000613707 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
GAPDHP41-201ENST00000613707 KCTD12Q96CX2 325 aaKnown RBP12.77□□□□□ -0.37
GAPDHP41-201ENST00000613707 C3orf80F5H4A9 247 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms