RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 LRRC9Q6ZRR7 1453 aa9.49□□□□□ -0.89
CDKAL1-204ENST00000613575 IER5LQ5T953 404 aa9.48□□□□□ -0.89
CDKAL1-204ENST00000613575 LMTK3Q96Q04 1460 aa9.48□□□□□ -0.89
CDKAL1-204ENST00000613575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDKAL1-204ENST00000613575 SEC24BO95487 1268 aa9.48□□□□□ -0.89
CDKAL1-204ENST00000613575 TSHZ2Q9NRE2 1034 aa9.48□□□□□ -0.89
CDKAL1-204ENST00000613575 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
CDKAL1-204ENST00000613575 MS4A4AQ96JQ5 239 aa9.47□□□□□ -0.89
CDKAL1-204ENST00000613575 SALL2Q9Y467 1007 aaPredicted RBP9.47□□□□□ -0.89
CDKAL1-204ENST00000613575 CASKIN1Q8WXD9 1431 aa9.47□□□□□ -0.89
CDKAL1-204ENST00000613575 TIAM1Q13009 1591 aa9.46□□□□□ -0.89
CDKAL1-204ENST00000613575 EFCAB5A4FU69 1503 aa9.46□□□□□ -0.89
CDKAL1-204ENST00000613575 ERCC6Q03468 1493 aa9.46□□□□□ -0.89
CDKAL1-204ENST00000613575 PPP1R37O75864 691 aa9.46□□□□□ -0.89
CDKAL1-204ENST00000613575 PLCG2P16885 1265 aa9.46□□□□□ -0.89
CDKAL1-204ENST00000613575 OCEL1Q9H607 264 aa9.46□□□□□ -0.89
CDKAL1-204ENST00000613575 CUL7Q14999 1698 aa9.45□□□□□ -0.9
CDKAL1-204ENST00000613575 IRX5P78411 483 aaPredicted RBP9.45□□□□□ -0.9
CDKAL1-204ENST00000613575 PHLDB1Q86UU1 1377 aa9.44□□□□□ -0.9
CDKAL1-204ENST00000613575 TDRD9Q8NDG6 1382 aaKnown RBP9.44□□□□□ -0.9
CDKAL1-204ENST00000613575 GAPVD1Q14C86 1478 aa9.44□□□□□ -0.9
CDKAL1-204ENST00000613575 FMN1Q68DA7 1419 aa9.43□□□□□ -0.9
CDKAL1-204ENST00000613575 PDIA4P13667 645 aaKnown RBP9.43□□□□□ -0.9
CDKAL1-204ENST00000613575 FYCO1Q9BQS8 1478 aa9.43□□□□□ -0.9
CDKAL1-204ENST00000613575 ST18O60284 1047 aa9.42□□□□□ -0.9
CDKAL1-204ENST00000613575 DPY19L2Q6NUT2 758 aa9.42□□□□□ -0.9
CDKAL1-204ENST00000613575 P3H3Q8IVL6 736 aa9.42□□□□□ -0.9
CDKAL1-204ENST00000613575 TIMELESSQ9UNS1 1208 aa9.42□□□□□ -0.9
CDKAL1-204ENST00000613575 SETD5Q9C0A6 1442 aa9.41□□□□□ -0.9
CDKAL1-204ENST00000613575 PDE4CQ08493 712 aa9.41□□□□□ -0.9
CDKAL1-204ENST00000613575 PDCD7Q8N8D1 485 aaKnown RBP9.41□□□□□ -0.9
CDKAL1-204ENST00000613575 COLQQ9Y215 455 aaPredicted RBP9.41□□□□□ -0.9
CDKAL1-204ENST00000613575 ABCA5Q8WWZ7 1642 aa9.41□□□□□ -0.9
CDKAL1-204ENST00000613575 FHOD3Q2V2M9 1422 aa9.41□□□□□ -0.9
CDKAL1-204ENST00000613575 G3V3G9 751 aa9.4□□□□□ -0.9
CDKAL1-204ENST00000613575 GLIPR1L2Q4G1C9 344 aa9.4□□□□□ -0.9
CDKAL1-204ENST00000613575 WDR97A6NE52 1622 aa9.39□□□□□ -0.91
CDKAL1-204ENST00000613575 RAB3GAP2Q9H2M9 1393 aa9.39□□□□□ -0.91
CDKAL1-204ENST00000613575 VSIG10Q8N0Z9 540 aa9.39□□□□□ -0.91
CDKAL1-204ENST00000613575 SNAPC4Q5SXM2 1469 aa9.37□□□□□ -0.91
CDKAL1-204ENST00000613575 TARBP1Q13395 1621 aaKnown RBP9.36□□□□□ -0.91
CDKAL1-204ENST00000613575 CCDC136Q96JN2 1154 aa9.36□□□□□ -0.91
CDKAL1-204ENST00000613575 PCF11O94913 1555 aaKnown RBP9.36□□□□□ -0.91
CDKAL1-204ENST00000613575 L3MBTL3Q96JM7 780 aaPredicted RBP9.36□□□□□ -0.91
CDKAL1-204ENST00000613575 BOLA1Q9Y3E2 137 aa9.36□□□□□ -0.91
CDKAL1-204ENST00000613575 SAMD9Q5K651 1589 aa9.35□□□□□ -0.91
CDKAL1-204ENST00000613575 CFAP43Q8NDM7 1665 aa9.35□□□□□ -0.91
CDKAL1-204ENST00000613575 ITGAEP38570 1179 aa9.35□□□□□ -0.91
CDKAL1-204ENST00000613575 ILDR2Q71H61 639 aa9.35□□□□□ -0.91
CDKAL1-204ENST00000613575 GRIN2BQ13224 1484 aa9.34□□□□□ -0.91
CDKAL1-204ENST00000613575 FAM50AQ14320 339 aaKnown RBP9.34□□□□□ -0.91
CDKAL1-204ENST00000613575 CADPS2Q86UW7 1296 aa9.34□□□□□ -0.91
CDKAL1-204ENST00000613575 ATP1B4Q9UN42 357 aaPredicted RBP9.34□□□□□ -0.91
CDKAL1-204ENST00000613575 RIMBP3CA6NJZ7 1639 aa9.33□□□□□ -0.92
CDKAL1-204ENST00000613575 RIMBP3BA6NNM3 1639 aa9.33□□□□□ -0.92
CDKAL1-204ENST00000613575 RIMBP3Q9UFD9 1639 aa9.33□□□□□ -0.92
CDKAL1-204ENST00000613575 KDM2AQ9Y2K7 1162 aa9.33□□□□□ -0.92
CDKAL1-204ENST00000613575 MRC2Q9UBG0 1479 aa9.33□□□□□ -0.92
CDKAL1-204ENST00000613575 MICALL2Q8IY33 904 aa9.32□□□□□ -0.92
CDKAL1-204ENST00000613575 FGD6Q6ZV73 1430 aa9.32□□□□□ -0.92
CDKAL1-204ENST00000613575 MAPKBP1O60336 1514 aa9.32□□□□□ -0.92
CDKAL1-204ENST00000613575 CTTNBP2Q8WZ74 1663 aa9.32□□□□□ -0.92
CDKAL1-204ENST00000613575 DEKP35659 375 aaKnown RBP9.32□□□□□ -0.92
CDKAL1-204ENST00000613575 THOC2Q8NI27 1593 aaKnown RBP9.32□□□□□ -0.92
CDKAL1-204ENST00000613575 MTUS2Q5JR59 1369 aa9.31□□□□□ -0.92
CDKAL1-204ENST00000613575 IFT140Q96RY7 1462 aa9.3□□□□□ -0.92
CDKAL1-204ENST00000613575 HOMEZQ8IX15 550 aa9.29□□□□□ -0.92
CDKAL1-204ENST00000613575 ARHGEF11O15085 1522 aa9.29□□□□□ -0.92
CDKAL1-204ENST00000613575 FGD1P98174 961 aa9.29□□□□□ -0.92
CDKAL1-204ENST00000613575 WDR70Q9NW82 654 aa9.29□□□□□ -0.92
CDKAL1-204ENST00000613575 HFM1A2PYH4 1435 aa9.28□□□□□ -0.92
CDKAL1-204ENST00000613575 MYOM3Q5VTT5 1437 aa9.28□□□□□ -0.92
CDKAL1-204ENST00000613575 KIF21AQ7Z4S6 1674 aa9.28□□□□□ -0.92
CDKAL1-204ENST00000613575 PPP1R15AO75807 674 aaPredicted RBP9.28□□□□□ -0.92
CDKAL1-204ENST00000613575 TAF7LQ5H9L4 462 aa9.28□□□□□ -0.92
CDKAL1-204ENST00000613575 SLAIN1Q8ND83 568 aa9.28□□□□□ -0.92
CDKAL1-204ENST00000613575 NCOA2Q15596 1464 aa9.28□□□□□ -0.92
CDKAL1-204ENST00000613575 PTPRKQ15262 1439 aa9.28□□□□□ -0.92
CDKAL1-204ENST00000613575 PDE4AP27815 886 aa9.27□□□□□ -0.93
CDKAL1-204ENST00000613575 TMEM121BQ9BXQ6 578 aaPredicted RBP9.27□□□□□ -0.93
CDKAL1-204ENST00000613575 CCDC18Q5T9S5 1454 aa9.27□□□□□ -0.93
CDKAL1-204ENST00000613575 UGGT2Q9NYU1 1516 aa9.27□□□□□ -0.93
CDKAL1-204ENST00000613575 C3orf67Q6ZVT6 689 aa9.26□□□□□ -0.93
CDKAL1-204ENST00000613575 SUPT16HQ9Y5B9 1047 aaKnown RBP9.26□□□□□ -0.93
CDKAL1-204ENST00000613575 WDR62O43379 1518 aa9.26□□□□□ -0.93
CDKAL1-204ENST00000613575 KIAA0586Q9BVV6 1533 aa9.26□□□□□ -0.93
CDKAL1-204ENST00000613575 FBXO41Q8TF61 875 aa9.26□□□□□ -0.93
CDKAL1-204ENST00000613575 SIN3AQ96ST3 1273 aa9.26□□□□□ -0.93
CDKAL1-204ENST00000613575 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
CDKAL1-204ENST00000613575 TCOF1Q13428 1488 aaKnown RBP9.25□□□□□ -0.93
CDKAL1-204ENST00000613575 MIA2Q96PC5 1412 aa9.25□□□□□ -0.93
CDKAL1-204ENST00000613575 UACAQ9BZF9 1416 aa9.25□□□□□ -0.93
CDKAL1-204ENST00000613575 EHBP1L1Q8N3D4 1523 aa9.25□□□□□ -0.93
CDKAL1-204ENST00000613575 NCKAP5LQ9HCH0 1330 aa9.24□□□□□ -0.93
CDKAL1-204ENST00000613575 ADAMTS12P58397 1594 aa9.24□□□□□ -0.93
CDKAL1-204ENST00000613575 NAIPQ13075 1403 aa9.24□□□□□ -0.93
CDKAL1-204ENST00000613575 TMC2Q8TDI7 906 aa9.24□□□□□ -0.93
CDKAL1-204ENST00000613575 IQGAP2Q13576 1575 aa9.24□□□□□ -0.93
CDKAL1-204ENST00000613575 EPRSP07814 1512 aaKnown RBP9.23□□□□□ -0.93
CDKAL1-204ENST00000613575 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms