RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 SUPT6HQ7KZ85 1726 aaKnown RBP13.8□□□□□ -0.2
CDC42EP3-206ENST00000611976 GOLGA6L3A6NEY3 463 aa13.8□□□□□ -0.2
CDC42EP3-206ENST00000611976 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
CDC42EP3-206ENST00000611976 MSNP26038 577 aaKnown RBP13.79□□□□□ -0.2
CDC42EP3-206ENST00000611976 SPAG9O60271 1321 aaKnown RBP13.79□□□□□ -0.2
CDC42EP3-206ENST00000611976 ANKRD50Q9ULJ7 1429 aa13.79□□□□□ -0.2
CDC42EP3-206ENST00000611976 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
CDC42EP3-206ENST00000611976 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
CDC42EP3-206ENST00000611976 MCCP23508 829 aa13.78□□□□□ -0.2
CDC42EP3-206ENST00000611976 HECW1Q76N89 1606 aa13.78□□□□□ -0.2
CDC42EP3-206ENST00000611976 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.2
CDC42EP3-206ENST00000611976 PCF11O94913 1555 aaKnown RBP13.77□□□□□ -0.2
CDC42EP3-206ENST00000611976 PRDM2Q13029 1718 aa13.77□□□□□ -0.2
CDC42EP3-206ENST00000611976 ZNF644Q9H582 1327 aaPredicted RBP13.77□□□□□ -0.2
CDC42EP3-206ENST00000611976 MFAP1P55081 439 aaKnown RBP13.77□□□□□ -0.21
CDC42EP3-206ENST00000611976 SMG6Q86US8 1419 aaKnown RBP13.77□□□□□ -0.21
CDC42EP3-206ENST00000611976 PLPPR3Q6T4P5 718 aa13.76□□□□□ -0.21
CDC42EP3-206ENST00000611976 KIF3BO15066 747 aa13.76□□□□□ -0.21
CDC42EP3-206ENST00000611976 BIVM-ERCC5R4GMW8 1640 aa13.75□□□□□ -0.21
CDC42EP3-206ENST00000611976 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
CDC42EP3-206ENST00000611976 GGT6Q6P531 493 aa13.75□□□□□ -0.21
CDC42EP3-206ENST00000611976 NAIPQ13075 1403 aa13.75□□□□□ -0.21
CDC42EP3-206ENST00000611976 C14orf37Q86TY3 774 aa13.75□□□□□ -0.21
CDC42EP3-206ENST00000611976 GZF1Q9H116 711 aaPredicted RBP13.75□□□□□ -0.21
CDC42EP3-206ENST00000611976 CLUAP1Q96AJ1 413 aa13.74□□□□□ -0.21
CDC42EP3-206ENST00000611976 STAC3Q96MF2 364 aa13.73□□□□□ -0.21
CDC42EP3-206ENST00000611976 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
CDC42EP3-206ENST00000611976 TERF2IPQ9NYB0 399 aa13.73□□□□□ -0.21
CDC42EP3-206ENST00000611976 PTPRGP23470 1445 aa13.73□□□□□ -0.21
CDC42EP3-206ENST00000611976 TOPBP1Q92547 1522 aa13.73□□□□□ -0.21
CDC42EP3-206ENST00000611976 CC2D2AQ9P2K1 1620 aa13.72□□□□□ -0.21
CDC42EP3-206ENST00000611976 DNMBPQ6XZF7 1577 aa13.72□□□□□ -0.21
CDC42EP3-206ENST00000611976 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
CDC42EP3-206ENST00000611976 DDX11L8A8MPP1 907 aa13.72□□□□□ -0.21
CDC42EP3-206ENST00000611976 WASHC2CQ9Y4E1 1318 aa13.72□□□□□ -0.21
CDC42EP3-206ENST00000611976 ZRSR1Q15695 479 aaKnown RBP13.72□□□□□ -0.21
CDC42EP3-206ENST00000611976 SLC4A3P48751 1232 aa13.71□□□□□ -0.21
CDC42EP3-206ENST00000611976 STK26Q9P289 416 aa13.71□□□□□ -0.21
CDC42EP3-206ENST00000611976 NBPF8Q3BBV2 869 aa13.71□□□□□ -0.21
CDC42EP3-206ENST00000611976 HDGFP51858 240 aaKnown RBP13.71□□□□□ -0.22
CDC42EP3-206ENST00000611976 AKNAQ7Z591 1439 aa13.71□□□□□ -0.22
CDC42EP3-206ENST00000611976 GRIN2BQ13224 1484 aa13.71□□□□□ -0.22
CDC42EP3-206ENST00000611976 ZBTB7CA1YPR0 619 aa13.7□□□□□ -0.22
CDC42EP3-206ENST00000611976 APAF1O14727 1248 aa13.7□□□□□ -0.22
CDC42EP3-206ENST00000611976 AAMPQ13685 434 aa13.7□□□□□ -0.22
CDC42EP3-206ENST00000611976 NESP48681 1621 aa13.69□□□□□ -0.22
CDC42EP3-206ENST00000611976 ZKSCAN2Q63HK3 967 aa13.69□□□□□ -0.22
CDC42EP3-206ENST00000611976 DAPK1P53355 1430 aa13.69□□□□□ -0.22
CDC42EP3-206ENST00000611976 OS9Q13438 667 aaPredicted RBP13.69□□□□□ -0.22
CDC42EP3-206ENST00000611976 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
CDC42EP3-206ENST00000611976 CUL7Q14999 1698 aa13.69□□□□□ -0.22
CDC42EP3-206ENST00000611976 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
CDC42EP3-206ENST00000611976 ROCK1Q13464 1354 aa13.68□□□□□ -0.22
CDC42EP3-206ENST00000611976 COG6Q9Y2V7 657 aa13.68□□□□□ -0.22
CDC42EP3-206ENST00000611976 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
CDC42EP3-206ENST00000611976 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
CDC42EP3-206ENST00000611976 TPRNQ4KMQ1 711 aa13.68□□□□□ -0.22
CDC42EP3-206ENST00000611976 ABCA10Q8WWZ4 1543 aa13.67□□□□□ -0.22
CDC42EP3-206ENST00000611976 LMOD3Q0VAK6 560 aa13.67□□□□□ -0.22
CDC42EP3-206ENST00000611976 RTF1Q92541 710 aaKnown RBP13.67□□□□□ -0.22
CDC42EP3-206ENST00000611976 RRP7AQ9Y3A4 280 aaKnown RBP13.67□□□□□ -0.22
CDC42EP3-206ENST00000611976 CHAF1AQ13111 956 aaPredicted RBP13.67□□□□□ -0.22
CDC42EP3-206ENST00000611976 PTPN23Q9H3S7 1636 aa13.66□□□□□ -0.22
CDC42EP3-206ENST00000611976 SYAP1Q96A49 352 aaPredicted RBP13.66□□□□□ -0.22
CDC42EP3-206ENST00000611976 KCNJ4P48050 445 aa13.66□□□□□ -0.22
CDC42EP3-206ENST00000611976 TRAK1Q9UPV9 953 aa13.66□□□□□ -0.22
CDC42EP3-206ENST00000611976 GOLGA6L6A8MZA4 724 aa13.65□□□□□ -0.22
CDC42EP3-206ENST00000611976 CCDC184Q52MB2 194 aa13.65□□□□□ -0.22
CDC42EP3-206ENST00000611976 HMMRO75330 724 aa13.64□□□□□ -0.23
CDC42EP3-206ENST00000611976 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
CDC42EP3-206ENST00000611976 SKOR2Q2VWA4 1001 aaPredicted RBP13.64□□□□□ -0.23
CDC42EP3-206ENST00000611976 TROQ12816 1431 aaPredicted RBP13.64□□□□□ -0.23
CDC42EP3-206ENST00000611976 EVC2Q86UK5 1308 aa13.64□□□□□ -0.23
CDC42EP3-206ENST00000611976 GOLGA6L4A6NEF3 574 aa13.64□□□□□ -0.23
CDC42EP3-206ENST00000611976 NFKBIBQ15653 356 aa13.64□□□□□ -0.23
CDC42EP3-206ENST00000611976 DDX19BQ9UMR2 479 aa13.63□□□□□ -0.23
CDC42EP3-206ENST00000611976 EPRSP07814 1512 aaKnown RBP13.63□□□□□ -0.23
CDC42EP3-206ENST00000611976 RUNDC1Q96C34 613 aa13.63□□□□□ -0.23
CDC42EP3-206ENST00000611976 APBB1O00213 710 aa13.63□□□□□ -0.23
CDC42EP3-206ENST00000611976 BCL2L13Q9BXK5 485 aa13.63□□□□□ -0.23
CDC42EP3-206ENST00000611976 C9orf84Q5VXU9 1444 aa13.62□□□□□ -0.23
CDC42EP3-206ENST00000611976 ADAMTS8Q9UP79 889 aa13.62□□□□□ -0.23
CDC42EP3-206ENST00000611976 CDCA7LQ96GN5 454 aa13.62□□□□□ -0.23
CDC42EP3-206ENST00000611976 BACH2Q9BYV9 841 aa13.61□□□□□ -0.23
CDC42EP3-206ENST00000611976 ST18O60284 1047 aa13.61□□□□□ -0.23
CDC42EP3-206ENST00000611976 KIAA1211Q6ZU35 1233 aa13.61□□□□□ -0.23
CDC42EP3-206ENST00000611976 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
CDC42EP3-206ENST00000611976 KIAA2012Q0VF49 1180 aa13.6□□□□□ -0.23
CDC42EP3-206ENST00000611976 DZIP1LQ8IYY4 767 aaKnown RBP13.6□□□□□ -0.23
CDC42EP3-206ENST00000611976 CHMP5Q9NZZ3 219 aa13.6□□□□□ -0.23
CDC42EP3-206ENST00000611976 NCOA1Q15788 1441 aa13.6□□□□□ -0.23
CDC42EP3-206ENST00000611976 NRDCO43847 1150 aa13.6□□□□□ -0.23
CDC42EP3-206ENST00000611976 FGD1P98174 961 aa13.6□□□□□ -0.23
CDC42EP3-206ENST00000611976 ANKRD30BQ9BXX2 1392 aa13.6□□□□□ -0.23
CDC42EP3-206ENST00000611976 PPP2R1AP30153 589 aa13.59□□□□□ -0.23
CDC42EP3-206ENST00000611976 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
CDC42EP3-206ENST00000611976 CHMP4AQ9BY43 222 aa13.59□□□□□ -0.23
CDC42EP3-206ENST00000611976 STK31Q9BXU1 1019 aa13.58□□□□□ -0.23
CDC42EP3-206ENST00000611976 SYNJ2O15056 1496 aa13.58□□□□□ -0.24
CDC42EP3-206ENST00000611976 SCAPERQ9BY12 1400 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms