RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 MSH5O43196 834 aa4.83□□□□□ -1.64
RNF38-210ENST00000611646 RRBP1Q9P2E9 1410 aaKnown RBP4.83□□□□□ -1.64
RNF38-210ENST00000611646 KANK1Q14678 1352 aa4.83□□□□□ -1.64
RNF38-210ENST00000611646 OS9Q13438 667 aaPredicted RBP4.83□□□□□ -1.64
RNF38-210ENST00000611646 AQRO60306 1485 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNF38-210ENST00000611646 UACAQ9BZF9 1416 aa4.83□□□□□ -1.64
RNF38-210ENST00000611646 CNTLNQ9NXG0 1405 aa4.83□□□□□ -1.64
RNF38-210ENST00000611646 NBPF1Q3BBV0 1214 aa4.82□□□□□ -1.64
RNF38-210ENST00000611646 NCOA2Q15596 1464 aa4.82□□□□□ -1.64
RNF38-210ENST00000611646 CCDC144AA2RUR9 1427 aa4.82□□□□□ -1.64
RNF38-210ENST00000611646 FOXD4L6Q3SYB3 417 aaPredicted RBP4.82□□□□□ -1.64
RNF38-210ENST00000611646 FOXD4L3Q6VB84 417 aaPredicted RBP4.82□□□□□ -1.64
RNF38-210ENST00000611646 RWDD1Q9H446 243 aaPredicted RBP4.82□□□□□ -1.64
RNF38-210ENST00000611646 NAP1L2Q9ULW6 460 aaPredicted RBP4.82□□□□□ -1.64
RNF38-210ENST00000611646 MYOM3Q5VTT5 1437 aa4.82□□□□□ -1.64
RNF38-210ENST00000611646 CARMIL2Q6F5E8 1435 aa4.82□□□□□ -1.64
RNF38-210ENST00000611646 PANK1Q8TE04 598 aa4.82□□□□□ -1.64
RNF38-210ENST00000611646 ADAMTS8Q9UP79 889 aa4.82□□□□□ -1.64
RNF38-210ENST00000611646 SLC4A10Q6U841 1118 aa4.81□□□□□ -1.64
RNF38-210ENST00000611646 EFCAB2Q5VUJ9 269 aa4.81□□□□□ -1.64
RNF38-210ENST00000611646 FAM161AQ3B820 660 aa4.81□□□□□ -1.64
RNF38-210ENST00000611646 SPAG9O60271 1321 aaKnown RBP4.81□□□□□ -1.64
RNF38-210ENST00000611646 IL27Q8NEV9 243 aa4.81□□□□□ -1.64
RNF38-210ENST00000611646 NESP48681 1621 aa4.81□□□□□ -1.64
RNF38-210ENST00000611646 BICRAQ9NZM4 1560 aa4.8□□□□□ -1.64
RNF38-210ENST00000611646 KCNJ4P48050 445 aa4.8□□□□□ -1.64
RNF38-210ENST00000611646 PDE3BQ13370 1112 aa4.8□□□□□ -1.64
RNF38-210ENST00000611646 GSE1Q14687 1217 aa4.8□□□□□ -1.64
RNF38-210ENST00000611646 GAPVD1Q14C86 1478 aa4.8□□□□□ -1.64
RNF38-210ENST00000611646 CENPQQ7L2Z9 268 aaPredicted RBP4.8□□□□□ -1.64
RNF38-210ENST00000611646 CUX1P39880 1505 aa4.8□□□□□ -1.64
RNF38-210ENST00000611646 GOLGA6L3A6NEY3 463 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 AMER1Q5JTC6 1135 aaPredicted RBP4.79□□□□□ -1.64
RNF38-210ENST00000611646 TMEM132EQ6IEE7 984 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 HDGFL2Q7Z4V5 671 aaPredicted RBP4.79□□□□□ -1.64
RNF38-210ENST00000611646 WASHC2CQ9Y4E1 1318 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 DCAF8L1A6NGE4 600 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 MS4A1P11836 297 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 L1TD1Q5T7N2 865 aaKnown RBP4.79□□□□□ -1.64
RNF38-210ENST00000611646 PMFBP1Q8TBY8 1022 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 LTV1Q96GA3 475 aaPredicted RBP4.79□□□□□ -1.64
RNF38-210ENST00000611646 BRPF3Q9ULD4 1205 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 PRXQ9BXM0 1461 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 MINK1Q8N4C8 1332 aaPredicted RBP4.79□□□□□ -1.64
RNF38-210ENST00000611646 ANKRD45Q5TZF3 282 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 BCAR3O75815 825 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 MSNP26038 577 aaKnown RBP4.79□□□□□ -1.64
RNF38-210ENST00000611646 NECTIN2Q92692 538 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 PRDM2Q13029 1718 aa4.79□□□□□ -1.64
RNF38-210ENST00000611646 IPO8O15397 1037 aaKnown RBP4.78□□□□□ -1.64
RNF38-210ENST00000611646 FGD1P98174 961 aa4.78□□□□□ -1.64
RNF38-210ENST00000611646 CASKIN1Q8WXD9 1431 aa4.78□□□□□ -1.64
RNF38-210ENST00000611646 TRIM6-TRIM34B2RNG4 842 aa4.78□□□□□ -1.64
RNF38-210ENST00000611646 NFKBIBQ15653 356 aa4.78□□□□□ -1.64
RNF38-210ENST00000611646 RTF1Q92541 710 aaKnown RBP4.78□□□□□ -1.64
RNF38-210ENST00000611646 HAP1P54257 671 aaPredicted RBP4.78□□□□□ -1.64
RNF38-210ENST00000611646 DNAJC5BQ9UF47 199 aa4.78□□□□□ -1.64
RNF38-210ENST00000611646 TULP1O00294 542 aaPredicted RBP4.77□□□□□ -1.65
RNF38-210ENST00000611646 EIF3AQ14152 1382 aaKnown RBP4.77□□□□□ -1.65
RNF38-210ENST00000611646 PNNQ9H307 717 aaKnown RBP4.77□□□□□ -1.65
RNF38-210ENST00000611646 CCDC9Q9Y3X0 531 aaKnown RBP4.77□□□□□ -1.65
RNF38-210ENST00000611646 E9PSI1 815 aa4.77□□□□□ -1.65
RNF38-210ENST00000611646 HMOX1P09601 288 aa4.77□□□□□ -1.65
RNF38-210ENST00000611646 ANO8Q9HCE9 1232 aaPredicted RBP4.77□□□□□ -1.65
RNF38-210ENST00000611646 FRAT2O75474 233 aaPredicted RBP4.77□□□□□ -1.65
RNF38-210ENST00000611646 C20orf194Q5TEA3 1177 aa4.77□□□□□ -1.65
RNF38-210ENST00000611646 PNISRQ8TF01 805 aaKnown RBP4.77□□□□□ -1.65
RNF38-210ENST00000611646 GGNBP2Q9H3C7 697 aa4.77□□□□□ -1.65
RNF38-210ENST00000611646 ZNF330Q9Y3S2 320 aaPredicted RBP4.77□□□□□ -1.65
RNF38-210ENST00000611646 ANKRD50Q9ULJ7 1429 aa4.77□□□□□ -1.65
RNF38-210ENST00000611646 AFAP1Q8N556 730 aa4.77□□□□□ -1.65
RNF38-210ENST00000611646 GBP4Q96PP9 640 aa4.77□□□□□ -1.65
RNF38-210ENST00000611646 CABP2Q9NPB3 220 aa4.77□□□□□ -1.65
RNF38-210ENST00000611646 TIAM1Q13009 1591 aa4.77□□□□□ -1.65
RNF38-210ENST00000611646 CFAP70Q5T0N1 1121 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 LNPKQ9C0E8 428 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 PRG4Q92954 1404 aaPredicted RBP4.76□□□□□ -1.65
RNF38-210ENST00000611646 ZNF428Q96B54 188 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 ERICH3Q5RHP9 1530 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 PTPRGP23470 1445 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.76□□□□□ -1.65
RNF38-210ENST00000611646 ZRSR1Q15695 479 aaKnown RBP4.76□□□□□ -1.65
RNF38-210ENST00000611646 DRC7Q8IY82 874 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 TOP2BQ02880 1626 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 PPP2R1AP30153 589 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 RIPK4P57078 832 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 ZKSCAN2Q63HK3 967 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 TSR2Q969E8 191 aaKnown RBP4.76□□□□□ -1.65
RNF38-210ENST00000611646 C1orf115Q9H7X2 142 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 RILPL2Q969X0 211 aa4.76□□□□□ -1.65
RNF38-210ENST00000611646 CDK13Q14004 1512 aaKnown RBP4.75□□□□□ -1.65
RNF38-210ENST00000611646 GOLGA6L4A6NEF3 574 aa4.75□□□□□ -1.65
RNF38-210ENST00000611646 TERF2IPQ9NYB0 399 aa4.75□□□□□ -1.65
RNF38-210ENST00000611646 FYCO1Q9BQS8 1478 aa4.75□□□□□ -1.65
RNF38-210ENST00000611646 CHMP4BQ9H444 224 aaKnown RBP4.75□□□□□ -1.65
RNF38-210ENST00000611646 HFM1A2PYH4 1435 aa4.75□□□□□ -1.65
RNF38-210ENST00000611646 CGNL1Q0VF96 1302 aa4.75□□□□□ -1.65
RNF38-210ENST00000611646 NAIPQ13075 1403 aa4.75□□□□□ -1.65
RNF38-210ENST00000611646 KCNA4P22459 653 aa4.75□□□□□ -1.65
RNF38-210ENST00000611646 MCCP23508 829 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms