RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 NCOA2Q15596 1464 aa17.59■□□□□ 0.41
MUC1-223ENST00000611571 A0A0G2JS52 829 aa17.58■□□□□ 0.41
MUC1-223ENST00000611571 NUTM2FA1L443 756 aa17.58■□□□□ 0.4
MUC1-223ENST00000611571 MS4A1P11836 297 aa17.58■□□□□ 0.4
MUC1-223ENST00000611571 GSE1Q14687 1217 aa17.57■□□□□ 0.4
MUC1-223ENST00000611571 KANK1Q14678 1352 aa17.57■□□□□ 0.4
MUC1-223ENST00000611571 CENPQQ7L2Z9 268 aaPredicted RBP17.57■□□□□ 0.4
MUC1-223ENST00000611571 CASC1Q6TDU7 716 aa17.56■□□□□ 0.4
MUC1-223ENST00000611571 SPAG9O60271 1321 aaKnown RBP17.55■□□□□ 0.4
MUC1-223ENST00000611571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.55■□□□□ 0.4
MUC1-223ENST00000611571 PNISRQ8TF01 805 aaKnown RBP17.55■□□□□ 0.4
MUC1-223ENST00000611571 IL27Q8NEV9 243 aa17.54■□□□□ 0.4
MUC1-223ENST00000611571 PANK1Q8TE04 598 aa17.54■□□□□ 0.4
MUC1-223ENST00000611571 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.4
MUC1-223ENST00000611571 L1TD1Q5T7N2 865 aaKnown RBP17.52■□□□□ 0.4
MUC1-223ENST00000611571 NOL8Q76FK4 1167 aaKnown RBP17.52■□□□□ 0.4
MUC1-223ENST00000611571 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.39
MUC1-223ENST00000611571 FOXD4L5Q5VV16 416 aaPredicted RBP17.52■□□□□ 0.39
MUC1-223ENST00000611571 FOXD4L4Q8WXT5 416 aaPredicted RBP17.52■□□□□ 0.39
MUC1-223ENST00000611571 PMFBP1Q8TBY8 1022 aa17.51■□□□□ 0.39
MUC1-223ENST00000611571 CASKIN1Q8WXD9 1431 aa17.51■□□□□ 0.39
MUC1-223ENST00000611571 IPO8O15397 1037 aaKnown RBP17.5■□□□□ 0.39
MUC1-223ENST00000611571 PNNQ9H307 717 aaKnown RBP17.5■□□□□ 0.39
MUC1-223ENST00000611571 NFKBIBQ15653 356 aa17.5■□□□□ 0.39
MUC1-223ENST00000611571 OS9Q13438 667 aaPredicted RBP17.49■□□□□ 0.39
MUC1-223ENST00000611571 GOLGA6L3A6NEY3 463 aa17.48■□□□□ 0.39
MUC1-223ENST00000611571 BRPF3Q9ULD4 1205 aa17.48■□□□□ 0.39
MUC1-223ENST00000611571 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
MUC1-223ENST00000611571 CUX1P39880 1505 aa17.47■□□□□ 0.39
MUC1-223ENST00000611571 SLC4A10Q6U841 1118 aa17.47■□□□□ 0.39
MUC1-223ENST00000611571 FOXD4L6Q3SYB3 417 aaPredicted RBP17.46■□□□□ 0.39
MUC1-223ENST00000611571 FOXD4L3Q6VB84 417 aaPredicted RBP17.46■□□□□ 0.39
MUC1-223ENST00000611571 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
MUC1-223ENST00000611571 KCNJ4P48050 445 aa17.46■□□□□ 0.39
MUC1-223ENST00000611571 E9PSI1 815 aa17.46■□□□□ 0.38
MUC1-223ENST00000611571 HDGFL2Q7Z4V5 671 aaPredicted RBP17.46■□□□□ 0.38
MUC1-223ENST00000611571 BCAR3O75815 825 aa17.45■□□□□ 0.38
MUC1-223ENST00000611571 ANKRD50Q9ULJ7 1429 aa17.45■□□□□ 0.38
MUC1-223ENST00000611571 FRAT2O75474 233 aaPredicted RBP17.45■□□□□ 0.38
MUC1-223ENST00000611571 NESP48681 1621 aa17.44■□□□□ 0.38
MUC1-223ENST00000611571 WASHC2CQ9Y4E1 1318 aa17.44■□□□□ 0.38
MUC1-223ENST00000611571 ANKRD45Q5TZF3 282 aa17.44■□□□□ 0.38
MUC1-223ENST00000611571 TMEM132EQ6IEE7 984 aa17.44■□□□□ 0.38
MUC1-223ENST00000611571 NCAPD3P42695 1498 aa17.43■□□□□ 0.38
MUC1-223ENST00000611571 RSPH4AQ5TD94 716 aa17.43■□□□□ 0.38
MUC1-223ENST00000611571 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
MUC1-223ENST00000611571 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
MUC1-223ENST00000611571 NAIPQ13075 1403 aa17.42■□□□□ 0.38
MUC1-223ENST00000611571 MSNP26038 577 aaKnown RBP17.42■□□□□ 0.38
MUC1-223ENST00000611571 GBP4Q96PP9 640 aa17.42■□□□□ 0.38
MUC1-223ENST00000611571 CHMP4BQ9H444 224 aaKnown RBP17.42■□□□□ 0.38
MUC1-223ENST00000611571 ANO8Q9HCE9 1232 aaPredicted RBP17.42■□□□□ 0.38
MUC1-223ENST00000611571 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
MUC1-223ENST00000611571 MINK1Q8N4C8 1332 aaPredicted RBP17.41■□□□□ 0.38
MUC1-223ENST00000611571 CFAP70Q5T0N1 1121 aa17.41■□□□□ 0.38
MUC1-223ENST00000611571 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
MUC1-223ENST00000611571 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
MUC1-223ENST00000611571 BACH2Q9BYV9 841 aa17.4■□□□□ 0.38
MUC1-223ENST00000611571 CGNL1Q0VF96 1302 aa17.4■□□□□ 0.38
MUC1-223ENST00000611571 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
MUC1-223ENST00000611571 PTPRGP23470 1445 aa17.39■□□□□ 0.38
MUC1-223ENST00000611571 C20orf194Q5TEA3 1177 aa17.39■□□□□ 0.37
MUC1-223ENST00000611571 LNPKQ9C0E8 428 aa17.39■□□□□ 0.37
MUC1-223ENST00000611571 FGD1P98174 961 aa17.39■□□□□ 0.37
MUC1-223ENST00000611571 RTF1Q92541 710 aaKnown RBP17.38■□□□□ 0.37
MUC1-223ENST00000611571 TOP2BQ02880 1626 aa17.38■□□□□ 0.37
MUC1-223ENST00000611571 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
MUC1-223ENST00000611571 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
MUC1-223ENST00000611571 BRD4O60885 1362 aaPredicted RBP17.37■□□□□ 0.37
MUC1-223ENST00000611571 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
MUC1-223ENST00000611571 TRIM6-TRIM34B2RNG4 842 aa17.36■□□□□ 0.37
MUC1-223ENST00000611571 TERF2IPQ9NYB0 399 aa17.36■□□□□ 0.37
MUC1-223ENST00000611571 PRG4Q92954 1404 aaPredicted RBP17.35■□□□□ 0.37
MUC1-223ENST00000611571 LTV1Q96GA3 475 aaPredicted RBP17.35■□□□□ 0.37
MUC1-223ENST00000611571 FYCO1Q9BQS8 1478 aa17.35■□□□□ 0.37
MUC1-223ENST00000611571 MTHFSP49914 203 aa17.35■□□□□ 0.37
MUC1-223ENST00000611571 TCP11L2Q8N4U5 519 aa17.34■□□□□ 0.37
MUC1-223ENST00000611571 DZIP1LQ8IYY4 767 aaKnown RBP17.33■□□□□ 0.37
MUC1-223ENST00000611571 RIPK4P57078 832 aa17.33■□□□□ 0.36
MUC1-223ENST00000611571 HMOX1P09601 288 aa17.32■□□□□ 0.36
MUC1-223ENST00000611571 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
MUC1-223ENST00000611571 SLC12A5Q9H2X9 1139 aa17.32■□□□□ 0.36
MUC1-223ENST00000611571 GOLGA6L4A6NEF3 574 aa17.32■□□□□ 0.36
MUC1-223ENST00000611571 DDX49Q9Y6V7 483 aaKnown RBP17.32■□□□□ 0.36
MUC1-223ENST00000611571 CABP2Q9NPB3 220 aa17.31■□□□□ 0.36
MUC1-223ENST00000611571 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
MUC1-223ENST00000611571 ZRSR1Q15695 479 aaKnown RBP17.3■□□□□ 0.36
MUC1-223ENST00000611571 TSR2Q969E8 191 aaKnown RBP17.3■□□□□ 0.36
MUC1-223ENST00000611571 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
MUC1-223ENST00000611571 PRDM2Q13029 1718 aa17.28■□□□□ 0.36
MUC1-223ENST00000611571 MCCP23508 829 aa17.28■□□□□ 0.36
MUC1-223ENST00000611571 RUNDC1Q96C34 613 aa17.28■□□□□ 0.36
MUC1-223ENST00000611571 C22orf23Q9BZE7 217 aa17.27■□□□□ 0.36
MUC1-223ENST00000611571 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.35
MUC1-223ENST00000611571 RILPL2Q969X0 211 aa17.26■□□□□ 0.35
MUC1-223ENST00000611571 PDZRN3Q9UPQ7 1066 aa17.26■□□□□ 0.35
MUC1-223ENST00000611571 CDK13Q14004 1512 aaKnown RBP17.25■□□□□ 0.35
MUC1-223ENST00000611571 KIAA1211Q6ZU35 1233 aa17.25■□□□□ 0.35
MUC1-223ENST00000611571 KIAA1107Q9UPP5 1409 aa17.25■□□□□ 0.35
MUC1-223ENST00000611571 DRC7Q8IY82 874 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms