RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 EFCAB2Q5VUJ9 269 aa21.8■■□□□ 1.08
TRIM46-211ENST00000611379 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
TRIM46-211ENST00000611379 PLEKHH2Q8IVE3 1493 aa21.78■■□□□ 1.08
TRIM46-211ENST00000611379 ZBED9Q6R2W3 1325 aa21.77■■□□□ 1.08
TRIM46-211ENST00000611379 PLCH2O75038 1416 aa21.74■■□□□ 1.07
TRIM46-211ENST00000611379 MAST1Q9Y2H9 1570 aa21.73■■□□□ 1.07
TRIM46-211ENST00000611379 MYO5CQ9NQX4 1742 aa21.73■■□□□ 1.07
TRIM46-211ENST00000611379 NBPF1Q3BBV0 1214 aa21.72■■□□□ 1.07
TRIM46-211ENST00000611379 PLA2R1Q13018 1463 aa21.71■■□□□ 1.07
TRIM46-211ENST00000611379 TMC1Q8TDI8 760 aa21.71■■□□□ 1.07
TRIM46-211ENST00000611379 PRAG1Q86YV5 1406 aa21.69■■□□□ 1.06
TRIM46-211ENST00000611379 DUOX2Q9NRD8 1548 aa21.68■■□□□ 1.06
TRIM46-211ENST00000611379 UNC13BO14795 1591 aa21.67■■□□□ 1.06
TRIM46-211ENST00000611379 ZCCHC11Q5TAX3 1644 aaKnown RBP21.67■■□□□ 1.06
TRIM46-211ENST00000611379 TRAPPC8Q9Y2L5 1435 aa21.67■■□□□ 1.06
TRIM46-211ENST00000611379 AFAP1Q8N556 730 aa21.67■■□□□ 1.06
TRIM46-211ENST00000611379 SENP3-EIF4A1A0A087X0R7 540 aa21.66■■□□□ 1.06
TRIM46-211ENST00000611379 CLASP1Q7Z460 1538 aa21.66■■□□□ 1.06
TRIM46-211ENST00000611379 UHRF1BP1LA0JNW5 1464 aa21.66■■□□□ 1.06
TRIM46-211ENST00000611379 SPAG9O60271 1321 aaKnown RBP21.66■■□□□ 1.06
TRIM46-211ENST00000611379 PLXNC1O60486 1568 aa21.66■■□□□ 1.06
TRIM46-211ENST00000611379 ERBINQ96RT1 1412 aa21.64■■□□□ 1.05
TRIM46-211ENST00000611379 A2MP01023 1474 aa21.64■■□□□ 1.05
TRIM46-211ENST00000611379 PNISRQ8TF01 805 aaKnown RBP21.64■■□□□ 1.05
TRIM46-211ENST00000611379 MYT1LQ9UL68 1186 aa21.61■■□□□ 1.05
TRIM46-211ENST00000611379 ERICH6BQ5W0A0 696 aa21.61■■□□□ 1.05
TRIM46-211ENST00000611379 IQGAP3Q86VI3 1631 aa21.61■■□□□ 1.05
TRIM46-211ENST00000611379 RALBP1Q15311 655 aa21.6■■□□□ 1.05
TRIM46-211ENST00000611379 PPP4R2Q9NY27 417 aa21.59■■□□□ 1.05
TRIM46-211ENST00000611379 ABCC1P33527 1531 aa21.59■■□□□ 1.05
TRIM46-211ENST00000611379 RBM19Q9Y4C8 960 aaKnown RBP21.59■■□□□ 1.05
TRIM46-211ENST00000611379 MYBBP1AQ9BQG0 1328 aaKnown RBP21.59■■□□□ 1.05
TRIM46-211ENST00000611379 TRPM1Q7Z4N2 1603 aa21.57■■□□□ 1.04
TRIM46-211ENST00000611379 GPRASP1Q5JY77 1395 aa21.57■■□□□ 1.04
TRIM46-211ENST00000611379 MAGI2Q86UL8 1455 aa21.55■■□□□ 1.04
TRIM46-211ENST00000611379 ATP10AO60312 1499 aa21.55■■□□□ 1.04
TRIM46-211ENST00000611379 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
TRIM46-211ENST00000611379 KTN1Q86UP2 1357 aaKnown RBP21.54■■□□□ 1.04
TRIM46-211ENST00000611379 TESK2Q96S53 571 aa21.54■■□□□ 1.04
TRIM46-211ENST00000611379 BRD4O60885 1362 aaPredicted RBP21.53■■□□□ 1.04
TRIM46-211ENST00000611379 SMG6Q86US8 1419 aaKnown RBP21.52■■□□□ 1.04
TRIM46-211ENST00000611379 TMF1P82094 1093 aa21.52■■□□□ 1.03
TRIM46-211ENST00000611379 B4GALNT3Q6L9W6 998 aa21.52■■□□□ 1.03
TRIM46-211ENST00000611379 DISP3Q9P2K9 1392 aa21.51■■□□□ 1.03
TRIM46-211ENST00000611379 RTEL1-TNFRSF6BF6WH68 1400 aa21.51■■□□□ 1.03
TRIM46-211ENST00000611379 PER1O15534 1290 aaPredicted RBP21.5■■□□□ 1.03
TRIM46-211ENST00000611379 WDR7Q9Y4E6 1490 aa21.5■■□□□ 1.03
TRIM46-211ENST00000611379 KIF3BO15066 747 aa21.49■■□□□ 1.03
TRIM46-211ENST00000611379 MYT1Q01538 1121 aa21.49■■□□□ 1.03
TRIM46-211ENST00000611379 CC2D1BQ5T0F9 858 aaKnown RBP21.49■■□□□ 1.03
TRIM46-211ENST00000611379 NLRP13Q86W25 1043 aa21.49■■□□□ 1.03
TRIM46-211ENST00000611379 PANK3Q9H999 370 aa21.49■■□□□ 1.03
TRIM46-211ENST00000611379 FANCAO15360 1455 aa21.48■■□□□ 1.03
TRIM46-211ENST00000611379 PRDM15P57071 1507 aaPredicted RBP21.47■■□□□ 1.03
TRIM46-211ENST00000611379 COL17A1Q9UMD9 1497 aaPredicted RBP21.46■■□□□ 1.03
TRIM46-211ENST00000611379 LRPPRCP42704 1394 aaKnown RBP21.46■■□□□ 1.03
TRIM46-211ENST00000611379 SALL2Q9Y467 1007 aaPredicted RBP21.46■■□□□ 1.03
TRIM46-211ENST00000611379 SCAPERQ9BY12 1400 aa21.45■■□□□ 1.03
TRIM46-211ENST00000611379 EIF2AK4Q9P2K8 1649 aaKnown RBP21.45■■□□□ 1.02
TRIM46-211ENST00000611379 ZFYVE16Q7Z3T8 1539 aa21.45■■□□□ 1.02
TRIM46-211ENST00000611379 ARAP3Q8WWN8 1544 aa21.45■■□□□ 1.02
TRIM46-211ENST00000611379 KANK1Q14678 1352 aa21.45■■□□□ 1.02
TRIM46-211ENST00000611379 PARD3Q8TEW0 1356 aa21.45■■□□□ 1.02
TRIM46-211ENST00000611379 E9PCH4 1651 aa21.43■■□□□ 1.02
TRIM46-211ENST00000611379 ADGRL1O94910 1474 aa21.41■■□□□ 1.02
TRIM46-211ENST00000611379 WASHC2CQ9Y4E1 1318 aa21.41■■□□□ 1.02
TRIM46-211ENST00000611379 LAMC1P11047 1609 aa21.41■■□□□ 1.02
TRIM46-211ENST00000611379 ATP7AQ04656 1500 aa21.39■■□□□ 1.02
TRIM46-211ENST00000611379 ASXL2Q76L83 1435 aa21.39■■□□□ 1.01
TRIM46-211ENST00000611379 NPM1P06748 294 aaKnown RBP eCLIP21.39■■□□□ 1.01
TRIM46-211ENST00000611379 PTPRTO14522 1441 aa21.38■■□□□ 1.01
TRIM46-211ENST00000611379 STAC3Q96MF2 364 aa21.37■■□□□ 1.01
TRIM46-211ENST00000611379 TRPM2O94759 1503 aa21.37■■□□□ 1.01
TRIM46-211ENST00000611379 RNF123Q5XPI4 1314 aa21.36■■□□□ 1.01
TRIM46-211ENST00000611379 KNSTRNQ9Y448 316 aa21.34■■□□□ 1.01
TRIM46-211ENST00000611379 ABCA9Q8IUA7 1624 aa21.34■■□□□ 1.01
TRIM46-211ENST00000611379 CCDC136Q96JN2 1154 aa21.33■■□□□ 1
TRIM46-211ENST00000611379 CDCA8Q53HL2 280 aa21.32■■□□□ 1
TRIM46-211ENST00000611379 ANP32EQ9BTT0 268 aa21.32■■□□□ 1
TRIM46-211ENST00000611379 CLTCL1P53675 1640 aa21.32■■□□□ 1
TRIM46-211ENST00000611379 MADDQ8WXG6 1647 aa21.31■■□□□ 1
TRIM46-211ENST00000611379 INO80Q9ULG1 1556 aaPredicted RBP21.31■■□□□ 1
TRIM46-211ENST00000611379 OSCARQ8IYS5 282 aa21.3■■□□□ 1
TRIM46-211ENST00000611379 SCAF11Q99590 1463 aaKnown RBP21.3■■□□□ 1
TRIM46-211ENST00000611379 SPHKAPQ2M3C7 1700 aa21.3■■□□□ 1
TRIM46-211ENST00000611379 DEPDC5O75140 1603 aa21.3■■□□□ 1
TRIM46-211ENST00000611379 RNF17Q9BXT8 1623 aaKnown RBP21.3■■□□□ 1
TRIM46-211ENST00000611379 TET3O43151 1660 aa21.29■■□□□ 1
TRIM46-211ENST00000611379 CFAP70Q5T0N1 1121 aa21.29■■□□□ 1
TRIM46-211ENST00000611379 PDE3BQ13370 1112 aa21.27■■□□□ 1
TRIM46-211ENST00000611379 RCAN3Q9UKA8 241 aa21.27■■□□□ 1
TRIM46-211ENST00000611379 CHGAP10645 457 aaKnown RBP21.27■□□□□ 0.99
TRIM46-211ENST00000611379 CDCA7LQ96GN5 454 aa21.26■□□□□ 0.99
TRIM46-211ENST00000611379 VWDEQ8N2E2 1590 aa21.26■□□□□ 0.99
TRIM46-211ENST00000611379 CEP152O94986 1710 aa21.26■□□□□ 0.99
TRIM46-211ENST00000611379 ADGRF5Q8IZF2 1346 aa21.25■□□□□ 0.99
TRIM46-211ENST00000611379 EIF3AQ14152 1382 aaKnown RBP21.25■□□□□ 0.99
TRIM46-211ENST00000611379 UGGT1Q9NYU2 1555 aa21.24■□□□□ 0.99
TRIM46-211ENST00000611379 GGT6Q6P531 493 aa21.24■□□□□ 0.99
TRIM46-211ENST00000611379 RRP1P56182 461 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms