RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 ST20-MTHFSA0A0A6YYL1 179 aa22.99■■□□□ 1.27
EWSR1-221ENST00000610553 MYBBP1AQ9BQG0 1328 aaKnown RBP22.99■■□□□ 1.27
EWSR1-221ENST00000610553 ERCC6L2Q5T890 1561 aa22.98■■□□□ 1.27
EWSR1-221ENST00000610553 RALBP1Q15311 655 aa22.97■■□□□ 1.27
EWSR1-221ENST00000610553 MYT1LQ9UL68 1186 aa22.97■■□□□ 1.27
EWSR1-221ENST00000610553 SHROOM2Q13796 1616 aa22.97■■□□□ 1.27
EWSR1-221ENST00000610553 TSPY4P0CV99 314 aa22.96■■□□□ 1.27
EWSR1-221ENST00000610553 TSPY10P0CW01 314 aa22.96■■□□□ 1.27
EWSR1-221ENST00000610553 TRPM1Q7Z4N2 1603 aa22.95■■□□□ 1.26
EWSR1-221ENST00000610553 FAM135AQ9P2D6 1515 aa22.95■■□□□ 1.26
EWSR1-221ENST00000610553 NOP58Q9Y2X3 529 aaKnown RBP22.94■■□□□ 1.26
EWSR1-221ENST00000610553 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
EWSR1-221ENST00000610553 KDM2AQ9Y2K7 1162 aa22.93■■□□□ 1.26
EWSR1-221ENST00000610553 SENP3-EIF4A1A0A087X0R7 540 aa22.92■■□□□ 1.26
EWSR1-221ENST00000610553 CCDC141Q6ZP82 1450 aa22.91■■□□□ 1.26
EWSR1-221ENST00000610553 SAMD9LQ8IVG5 1584 aa22.91■■□□□ 1.26
EWSR1-221ENST00000610553 PRAG1Q86YV5 1406 aa22.91■■□□□ 1.26
EWSR1-221ENST00000610553 PARD3Q8TEW0 1356 aa22.9■■□□□ 1.26
EWSR1-221ENST00000610553 PREX2Q70Z35 1606 aa22.89■■□□□ 1.26
EWSR1-221ENST00000610553 CDC42BPBQ9Y5S2 1711 aa22.88■■□□□ 1.25
EWSR1-221ENST00000610553 HNRNPMP52272 730 aaKnown RBP eCLIP22.88■■□□□ 1.25
EWSR1-221ENST00000610553 CLASP1Q7Z460 1538 aa22.88■■□□□ 1.25
EWSR1-221ENST00000610553 RRP1P56182 461 aaKnown RBP22.86■■□□□ 1.25
EWSR1-221ENST00000610553 PAK3O75914 559 aaPredicted RBP22.86■■□□□ 1.25
EWSR1-221ENST00000610553 NLRP13Q86W25 1043 aa22.86■■□□□ 1.25
EWSR1-221ENST00000610553 LAMC1P11047 1609 aa22.86■■□□□ 1.25
EWSR1-221ENST00000610553 UNC13BO14795 1591 aa22.85■■□□□ 1.25
EWSR1-221ENST00000610553 GPRASP1Q5JY77 1395 aa22.85■■□□□ 1.25
EWSR1-221ENST00000610553 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
EWSR1-221ENST00000610553 COL17A1Q9UMD9 1497 aaPredicted RBP22.83■■□□□ 1.25
EWSR1-221ENST00000610553 ANP32AP39687 249 aaKnown RBP22.82■■□□□ 1.24
EWSR1-221ENST00000610553 PRDM15P57071 1507 aaPredicted RBP22.82■■□□□ 1.24
EWSR1-221ENST00000610553 MAST1Q9Y2H9 1570 aa22.82■■□□□ 1.24
EWSR1-221ENST00000610553 IPO9Q96P70 1041 aaKnown RBP22.81■■□□□ 1.24
EWSR1-221ENST00000610553 A2MP01023 1474 aa22.81■■□□□ 1.24
EWSR1-221ENST00000610553 PLA2R1Q13018 1463 aa22.81■■□□□ 1.24
EWSR1-221ENST00000610553 PER1O15534 1290 aaPredicted RBP22.8■■□□□ 1.24
EWSR1-221ENST00000610553 PDE3BQ13370 1112 aa22.8■■□□□ 1.24
EWSR1-221ENST00000610553 RCAN3Q9UKA8 241 aa22.8■■□□□ 1.24
EWSR1-221ENST00000610553 ZMYM4Q5VZL5 1548 aa22.79■■□□□ 1.24
EWSR1-221ENST00000610553 RSPH4AQ5TD94 716 aa22.79■■□□□ 1.24
EWSR1-221ENST00000610553 SYCP2Q9BX26 1530 aa22.78■■□□□ 1.24
EWSR1-221ENST00000610553 INSRP06213 1382 aa22.78■■□□□ 1.24
EWSR1-221ENST00000610553 MYO5CQ9NQX4 1742 aa22.77■■□□□ 1.24
EWSR1-221ENST00000610553 IQGAP3Q86VI3 1631 aa22.77■■□□□ 1.23
EWSR1-221ENST00000610553 EXOC6Q8TAG9 804 aa22.76■■□□□ 1.23
EWSR1-221ENST00000610553 DEKP35659 375 aaKnown RBP22.76■■□□□ 1.23
EWSR1-221ENST00000610553 NBPF1Q3BBV0 1214 aa22.76■■□□□ 1.23
EWSR1-221ENST00000610553 EIF2AK4Q9P2K8 1649 aaKnown RBP22.76■■□□□ 1.23
EWSR1-221ENST00000610553 WASHC2CQ9Y4E1 1318 aa22.75■■□□□ 1.23
EWSR1-221ENST00000610553 PLXNC1O60486 1568 aa22.75■■□□□ 1.23
EWSR1-221ENST00000610553 BLMP54132 1417 aaPredicted RBP22.75■■□□□ 1.23
EWSR1-221ENST00000610553 TESK2Q96S53 571 aa22.74■■□□□ 1.23
EWSR1-221ENST00000610553 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
EWSR1-221ENST00000610553 ABCC2Q92887 1545 aa22.73■■□□□ 1.23
EWSR1-221ENST00000610553 TTC37Q6PGP7 1564 aa22.73■■□□□ 1.23
EWSR1-221ENST00000610553 NBR1Q14596 966 aa22.71■■□□□ 1.23
EWSR1-221ENST00000610553 RGL3Q3MIN7 710 aa22.7■■□□□ 1.22
EWSR1-221ENST00000610553 ATP10AO60312 1499 aa22.7■■□□□ 1.22
EWSR1-221ENST00000610553 TCERG1O14776 1098 aaKnown RBP22.7■■□□□ 1.22
EWSR1-221ENST00000610553 SALL2Q9Y467 1007 aaPredicted RBP22.7■■□□□ 1.22
EWSR1-221ENST00000610553 ARHGAP5Q13017 1502 aa22.7■■□□□ 1.22
EWSR1-221ENST00000610553 ERBINQ96RT1 1412 aa22.69■■□□□ 1.22
EWSR1-221ENST00000610553 RNF17Q9BXT8 1623 aaKnown RBP22.69■■□□□ 1.22
EWSR1-221ENST00000610553 MAGI2Q86UL8 1455 aa22.69■■□□□ 1.22
EWSR1-221ENST00000610553 ZBTB47Q9UFB7 747 aaPredicted RBP22.69■■□□□ 1.22
EWSR1-221ENST00000610553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.68■■□□□ 1.22
EWSR1-221ENST00000610553 PLEKHH2Q8IVE3 1493 aa22.67■■□□□ 1.22
EWSR1-221ENST00000610553 CDCA7LQ96GN5 454 aa22.67■■□□□ 1.22
EWSR1-221ENST00000610553 CC2D1BQ5T0F9 858 aaKnown RBP22.64■■□□□ 1.22
EWSR1-221ENST00000610553 DUOX2Q9NRD8 1548 aa22.64■■□□□ 1.21
EWSR1-221ENST00000610553 PANK3Q9H999 370 aa22.63■■□□□ 1.21
EWSR1-221ENST00000610553 MS4A1P11836 297 aa22.63■■□□□ 1.21
EWSR1-221ENST00000610553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.62■■□□□ 1.213e-7■■□□□ 13.4
EWSR1-221ENST00000610553 ZCCHC11Q5TAX3 1644 aaKnown RBP22.61■■□□□ 1.21
EWSR1-221ENST00000610553 TMF1P82094 1093 aa22.61■■□□□ 1.21
EWSR1-221ENST00000610553 PDE4AP27815 886 aa22.6■■□□□ 1.21
EWSR1-221ENST00000610553 BACH2Q9BYV9 841 aa22.6■■□□□ 1.21
EWSR1-221ENST00000610553 WDR7Q9Y4E6 1490 aa22.57■■□□□ 1.2
EWSR1-221ENST00000610553 IQGAP1P46940 1657 aa22.56■■□□□ 1.2
EWSR1-221ENST00000610553 MADDQ8WXG6 1647 aa22.55■■□□□ 1.2
EWSR1-221ENST00000610553 UHRF1BP1LA0JNW5 1464 aa22.55■■□□□ 1.2
EWSR1-221ENST00000610553 PLIN1O60240 522 aa22.55■■□□□ 1.2
EWSR1-221ENST00000610553 RTL5Q5HYW3 569 aaPredicted RBP22.54■■□□□ 1.2
EWSR1-221ENST00000610553 NPM2Q86SE8 214 aaKnown RBP22.53■■□□□ 1.2
EWSR1-221ENST00000610553 CRBNQ96SW2 442 aa22.52■■□□□ 1.2
EWSR1-221ENST00000610553 SYNMO15061 1565 aa22.51■■□□□ 1.19
EWSR1-221ENST00000610553 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
EWSR1-221ENST00000610553 ADAMTS8Q9UP79 889 aa22.49■■□□□ 1.19
EWSR1-221ENST00000610553 SPHKAPQ2M3C7 1700 aa22.49■■□□□ 1.19
EWSR1-221ENST00000610553 ABCC1P33527 1531 aa22.48■■□□□ 1.19
EWSR1-221ENST00000610553 PLEKHH1Q9ULM0 1364 aa22.47■■□□□ 1.19
EWSR1-221ENST00000610553 TRPM2O94759 1503 aa22.47■■□□□ 1.19
EWSR1-221ENST00000610553 PLCH2O75038 1416 aa22.47■■□□□ 1.19
EWSR1-221ENST00000610553 PPP2R1AP30153 589 aa22.46■■□□□ 1.19
EWSR1-221ENST00000610553 CEP152O94986 1710 aa22.46■■□□□ 1.19
EWSR1-221ENST00000610553 ZNF521Q96K83 1311 aa22.45■■□□□ 1.18
EWSR1-221ENST00000610553 AMER1Q5JTC6 1135 aaPredicted RBP22.45■■□□□ 1.18
EWSR1-221ENST00000610553 KDM2BQ8NHM5 1336 aa22.45■■□□□ 1.18
EWSR1-221ENST00000610553 C20orf194Q5TEA3 1177 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms