RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 SAFB2Q14151 953 aaKnown RBP eCLIP13.6□□□□□ -0.23
CTCFL-222ENST00000609232 CD109Q6YHK3 1445 aa13.6□□□□□ -0.23
CTCFL-222ENST00000609232 ARHGEF12Q9NZN5 1544 aa13.6□□□□□ -0.23
CTCFL-222ENST00000609232 ARHGEF5Q12774 1597 aa13.6□□□□□ -0.23
CTCFL-222ENST00000609232 DENND4BO75064 1496 aaPredicted RBP13.59□□□□□ -0.23
CTCFL-222ENST00000609232 PZPP20742 1482 aa13.59□□□□□ -0.23
CTCFL-222ENST00000609232 ADGRL1O94910 1474 aa13.59□□□□□ -0.23
CTCFL-222ENST00000609232 FAM69CQ0P6D2 419 aa13.58□□□□□ -0.24
CTCFL-222ENST00000609232 ANP32EQ9BTT0 268 aa13.58□□□□□ -0.24
CTCFL-222ENST00000609232 EIF4G2P78344 907 aaKnown RBP eCLIP13.58□□□□□ -0.24
CTCFL-222ENST00000609232 CROCC2H7BZ55 1655 aa13.57□□□□□ -0.24
CTCFL-222ENST00000609232 NEFLP07196 543 aa13.57□□□□□ -0.24
CTCFL-222ENST00000609232 GGT6Q6P531 493 aa13.56□□□□□ -0.24
CTCFL-222ENST00000609232 RAPGEF3O95398 923 aa13.56□□□□□ -0.24
CTCFL-222ENST00000609232 HSPA5P11021 654 aaKnown RBP13.55□□□□□ -0.24
CTCFL-222ENST00000609232 TNNT2P45379 298 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-222ENST00000609232 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
CTCFL-222ENST00000609232 RPRD2Q5VT52 1461 aaKnown RBP13.54□□□□□ -0.24
CTCFL-222ENST00000609232 ABCC1P33527 1531 aa13.53□□□□□ -0.24
CTCFL-222ENST00000609232 SUPT16HQ9Y5B9 1047 aaKnown RBP13.53□□□□□ -0.24
CTCFL-222ENST00000609232 MRS2Q9HD23 443 aa13.52□□□□□ -0.25
CTCFL-222ENST00000609232 KANK1Q14678 1352 aa13.51□□□□□ -0.25
CTCFL-222ENST00000609232 CCDC144AA2RUR9 1427 aa13.51□□□□□ -0.25
CTCFL-222ENST00000609232 DUOX2Q9NRD8 1548 aa13.5□□□□□ -0.25
CTCFL-222ENST00000609232 FAM135AQ9P2D6 1515 aa13.49□□□□□ -0.25
CTCFL-222ENST00000609232 CARD11Q9BXL7 1154 aa13.49□□□□□ -0.25
CTCFL-222ENST00000609232 ABCA9Q8IUA7 1624 aa13.48□□□□□ -0.25
CTCFL-222ENST00000609232 CC2D1BQ5T0F9 858 aaKnown RBP13.48□□□□□ -0.25
CTCFL-222ENST00000609232 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
CTCFL-222ENST00000609232 TSHZ2Q9NRE2 1034 aa13.47□□□□□ -0.25
CTCFL-222ENST00000609232 ERBINQ96RT1 1412 aa13.46□□□□□ -0.25
CTCFL-222ENST00000609232 ANO8Q9HCE9 1232 aaPredicted RBP13.46□□□□□ -0.25
CTCFL-222ENST00000609232 RTEL1-TNFRSF6BF6WH68 1400 aa13.46□□□□□ -0.26
CTCFL-222ENST00000609232 ARAP3Q8WWN8 1544 aa13.45□□□□□ -0.26
CTCFL-222ENST00000609232 MAST1Q9Y2H9 1570 aa13.45□□□□□ -0.26
CTCFL-222ENST00000609232 RIMBP3CA6NJZ7 1639 aa13.45□□□□□ -0.26
CTCFL-222ENST00000609232 RIMBP3BA6NNM3 1639 aa13.45□□□□□ -0.26
CTCFL-222ENST00000609232 RIMBP3Q9UFD9 1639 aa13.45□□□□□ -0.26
CTCFL-222ENST00000609232 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
CTCFL-222ENST00000609232 DHX29Q7Z478 1369 aaKnown RBP13.44□□□□□ -0.26
CTCFL-222ENST00000609232 ZNF518AQ6AHZ1 1483 aa13.44□□□□□ -0.26
CTCFL-222ENST00000609232 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
CTCFL-222ENST00000609232 TEX14Q8IWB6 1497 aa13.43□□□□□ -0.26
CTCFL-222ENST00000609232 PLXNC1O60486 1568 aa13.42□□□□□ -0.26
CTCFL-222ENST00000609232 ZFYVE16Q7Z3T8 1539 aa13.42□□□□□ -0.26
CTCFL-222ENST00000609232 TMC1Q8TDI8 760 aa13.42□□□□□ -0.26
CTCFL-222ENST00000609232 CCDC136Q96JN2 1154 aa13.42□□□□□ -0.26
CTCFL-222ENST00000609232 C11orf95C9JLR9 678 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-222ENST00000609232 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
CTCFL-222ENST00000609232 STK26Q9P289 416 aa13.41□□□□□ -0.26
CTCFL-222ENST00000609232 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
CTCFL-222ENST00000609232 WASHC2AQ641Q2 1341 aa13.4□□□□□ -0.26
CTCFL-222ENST00000609232 ROCK2O75116 1388 aaKnown RBP13.4□□□□□ -0.26
CTCFL-222ENST00000609232 NUTM2FA1L443 756 aa13.4□□□□□ -0.27
CTCFL-222ENST00000609232 KDM5DQ9BY66 1539 aa13.39□□□□□ -0.27
CTCFL-222ENST00000609232 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
CTCFL-222ENST00000609232 USP47Q96K76 1375 aa13.39□□□□□ -0.27
CTCFL-222ENST00000609232 A2MP01023 1474 aa13.38□□□□□ -0.27
CTCFL-222ENST00000609232 ST20-MTHFSA0A0A6YYL1 179 aa13.38□□□□□ -0.27
CTCFL-222ENST00000609232 SOX12O15370 315 aa13.37□□□□□ -0.27
CTCFL-222ENST00000609232 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
CTCFL-222ENST00000609232 NBPF1Q3BBV0 1214 aa13.37□□□□□ -0.27
CTCFL-222ENST00000609232 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
CTCFL-222ENST00000609232 NEO1Q92859 1461 aa13.35□□□□□ -0.27
CTCFL-222ENST00000609232 UNC13BO14795 1591 aa13.35□□□□□ -0.27
CTCFL-222ENST00000609232 PLA2R1Q13018 1463 aa13.35□□□□□ -0.27
CTCFL-222ENST00000609232 PPM1GO15355 546 aaPredicted RBP13.33□□□□□ -0.28
CTCFL-222ENST00000609232 TSPOAP1O95153 1857 aa13.33□□□□□ -0.28
CTCFL-222ENST00000609232 CFAP74Q9C0B2 1584 aa13.33□□□□□ -0.28
CTCFL-222ENST00000609232 ESF1Q9H501 851 aaKnown RBP13.33□□□□□ -0.28
CTCFL-222ENST00000609232 KIF7Q2M1P5 1343 aa13.33□□□□□ -0.28
CTCFL-222ENST00000609232 CCDC7Q96M83 1385 aa13.33□□□□□ -0.28
CTCFL-222ENST00000609232 IQGAP3Q86VI3 1631 aa13.32□□□□□ -0.28
CTCFL-222ENST00000609232 INO80Q9ULG1 1556 aaPredicted RBP13.32□□□□□ -0.28
CTCFL-222ENST00000609232 MLH3Q9UHC1 1453 aa13.31□□□□□ -0.28
CTCFL-222ENST00000609232 YEATS2Q9ULM3 1422 aa13.3□□□□□ -0.28
CTCFL-222ENST00000609232 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
CTCFL-222ENST00000609232 KIDINS220Q9ULH0 1771 aa13.3□□□□□ -0.28
CTCFL-222ENST00000609232 B4GALNT3Q6L9W6 998 aa13.29□□□□□ -0.28
CTCFL-222ENST00000609232 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
CTCFL-222ENST00000609232 TMEM132EQ6IEE7 984 aa13.28□□□□□ -0.28
CTCFL-222ENST00000609232 MAGI2Q86UL8 1455 aa13.28□□□□□ -0.28
CTCFL-222ENST00000609232 CFAP65Q6ZU64 1925 aaKnown RBP13.28□□□□□ -0.28
CTCFL-222ENST00000609232 ATP10AO60312 1499 aa13.27□□□□□ -0.28
CTCFL-222ENST00000609232 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
CTCFL-222ENST00000609232 TRAK1Q9UPV9 953 aa13.26□□□□□ -0.29
CTCFL-222ENST00000609232 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
CTCFL-222ENST00000609232 PRAG1Q86YV5 1406 aa13.26□□□□□ -0.29
CTCFL-222ENST00000609232 RALGAPBQ86X10 1494 aa13.26□□□□□ -0.29
CTCFL-222ENST00000609232 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
CTCFL-222ENST00000609232 KDM5CP41229 1560 aa13.24□□□□□ -0.29
CTCFL-222ENST00000609232 DIP2BQ9P265 1576 aa13.24□□□□□ -0.29
CTCFL-222ENST00000609232 E9PCH4 1651 aa13.24□□□□□ -0.29
CTCFL-222ENST00000609232 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
CTCFL-222ENST00000609232 SPATA31E1Q6ZUB1 1445 aa13.23□□□□□ -0.29
CTCFL-222ENST00000609232 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
CTCFL-222ENST00000609232 UGGT1Q9NYU2 1555 aa13.23□□□□□ -0.29
CTCFL-222ENST00000609232 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
CTCFL-222ENST00000609232 FBXO31Q5XUX0 539 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-222ENST00000609232 TMF1P82094 1093 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms