RNA–Protein interactions for RNA: ENST00000608535.1

SMIM8-208, Transcript of small integral membrane protein 8, humanhuman

Gene SMIM8, Length 3,915 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-208ENST00000608535 FOXD1Q16676 465 aa12.35□□□□□ -0.43
SMIM8-208ENST00000608535 MPNDQ8N594 471 aa12.35□□□□□ -0.43
SMIM8-208ENST00000608535 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
SMIM8-208ENST00000608535 PAX3P23760 479 aa12.34□□□□□ -0.43
SMIM8-208ENST00000608535 CASC1Q6TDU7 716 aa12.34□□□□□ -0.43
SMIM8-208ENST00000608535 SIRT1Q96EB6 747 aa12.33□□□□□ -0.43
SMIM8-208ENST00000608535 KDM4CQ9H3R0 1056 aa12.33□□□□□ -0.43
SMIM8-208ENST00000608535 KLHL42Q9P2K6 505 aa12.33□□□□□ -0.43
SMIM8-208ENST00000608535 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
SMIM8-208ENST00000608535 CCDC181Q5TID7 509 aa12.33□□□□□ -0.44
SMIM8-208ENST00000608535 AXDND1Q5T1B0 1012 aaPredicted RBP12.32□□□□□ -0.44
SMIM8-208ENST00000608535 UNC13AQ9UPW8 1703 aa12.32□□□□□ -0.44
SMIM8-208ENST00000608535 CC2D1BQ5T0F9 858 aaKnown RBP12.31□□□□□ -0.44
SMIM8-208ENST00000608535 ZFYVE27Q5T4F4 411 aa12.31□□□□□ -0.44
SMIM8-208ENST00000608535 CIZ1Q9ULV3 898 aaPredicted RBP12.31□□□□□ -0.44
SMIM8-208ENST00000608535 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
SMIM8-208ENST00000608535 RRP9O43818 475 aaKnown RBP12.3□□□□□ -0.44
SMIM8-208ENST00000608535 ARID4AP29374 1257 aaPredicted RBP12.29□□□□□ -0.44
SMIM8-208ENST00000608535 BARGINQ6ZT62 677 aa12.29□□□□□ -0.44
SMIM8-208ENST00000608535 DHX16O60231 1041 aaKnown RBP12.28□□□□□ -0.44
SMIM8-208ENST00000608535 SPDYE4A6NLX3 237 aa12.27□□□□□ -0.44
SMIM8-208ENST00000608535 ANP32BQ92688 251 aaKnown RBP12.27□□□□□ -0.44
SMIM8-208ENST00000608535 GIMAP6Q6P9H5 292 aa12.27□□□□□ -0.45
SMIM8-208ENST00000608535 MORC4Q8TE76 937 aa12.27□□□□□ -0.45
SMIM8-208ENST00000608535 DNAJC5BQ9UF47 199 aa12.27□□□□□ -0.45
SMIM8-208ENST00000608535 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
SMIM8-208ENST00000608535 TESPA1A2RU30 521 aaPredicted RBP12.26□□□□□ -0.45
SMIM8-208ENST00000608535 SPOCK2Q92563 424 aa12.26□□□□□ -0.45
SMIM8-208ENST00000608535 WDR78Q5VTH9 848 aa12.26□□□□□ -0.45
SMIM8-208ENST00000608535 NME8Q8N427 588 aa12.25□□□□□ -0.45
SMIM8-208ENST00000608535 GABBR1Q9UBS5 961 aa12.25□□□□□ -0.45
SMIM8-208ENST00000608535 HSP90AA2PQ14568 343 aaPredicted RBP12.25□□□□□ -0.45
SMIM8-208ENST00000608535 DRC1Q96MC2 740 aa12.25□□□□□ -0.45
SMIM8-208ENST00000608535 MTA3Q9BTC8 594 aa12.25□□□□□ -0.45
SMIM8-208ENST00000608535 LONRF3Q496Y0 759 aa12.25□□□□□ -0.45
SMIM8-208ENST00000608535 KRBA2Q6ZNG9 492 aa12.25□□□□□ -0.45
SMIM8-208ENST00000608535 TTC36A6NLP5 189 aa12.24□□□□□ -0.45
SMIM8-208ENST00000608535 GET4Q7L5D6 327 aaPredicted RBP12.24□□□□□ -0.45
SMIM8-208ENST00000608535 TSHZ1Q6ZSZ6 1077 aa12.23□□□□□ -0.45
SMIM8-208ENST00000608535 FLIIQ13045 1269 aa12.23□□□□□ -0.45
SMIM8-208ENST00000608535 SPOCK3Q9BQ16 436 aa12.23□□□□□ -0.45
SMIM8-208ENST00000608535 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMIM8-208ENST00000608535 SH3BP1Q9Y3L3 701 aa12.23□□□□□ -0.45
SMIM8-208ENST00000608535 CREB3O43889 395 aa12.23□□□□□ -0.45
SMIM8-208ENST00000608535 MRRFQ96E11 262 aaKnown RBP12.23□□□□□ -0.45
SMIM8-208ENST00000608535 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
SMIM8-208ENST00000608535 NKX1-1Q15270 411 aaPredicted RBP12.22□□□□□ -0.45
SMIM8-208ENST00000608535 KRI1Q8N9T8 703 aaKnown RBP12.22□□□□□ -0.45
SMIM8-208ENST00000608535 MYBPC2Q14324 1141 aa12.21□□□□□ -0.45
SMIM8-208ENST00000608535 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
SMIM8-208ENST00000608535 WDHD1O75717 1129 aaPredicted RBP12.2□□□□□ -0.46
SMIM8-208ENST00000608535 IVNS1ABPQ9Y6Y0 642 aa12.2□□□□□ -0.46
SMIM8-208ENST00000608535 SEMA3EO15041 775 aa12.19□□□□□ -0.46
SMIM8-208ENST00000608535 SERPINA10Q9UK55 444 aa12.19□□□□□ -0.46
SMIM8-208ENST00000608535 HMGB1P1B2RPK0 211 aaPredicted RBP12.18□□□□□ -0.46
SMIM8-208ENST00000608535 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
SMIM8-208ENST00000608535 SREK1Q8WXA9 508 aaKnown RBP12.18□□□□□ -0.46
SMIM8-208ENST00000608535 ZNF830Q96NB3 372 aaPredicted RBP12.18□□□□□ -0.46
SMIM8-208ENST00000608535 METTL14Q9HCE5 456 aaKnown RBP12.18□□□□□ -0.46
SMIM8-208ENST00000608535 SSFA2P28290 1259 aa12.18□□□□□ -0.46
SMIM8-208ENST00000608535 AMOTL2Q9Y2J4 779 aa12.18□□□□□ -0.46
SMIM8-208ENST00000608535 NBPF11Q86T75 865 aa12.18□□□□□ -0.46
SMIM8-208ENST00000608535 PPFIA4O75335 1185 aa12.18□□□□□ -0.46
SMIM8-208ENST00000608535 SEMA3FQ13275 785 aa12.18□□□□□ -0.46
SMIM8-208ENST00000608535 KCNA1Q09470 495 aa12.17□□□□□ -0.46
SMIM8-208ENST00000608535 ZNF280DQ6N043 979 aa12.17□□□□□ -0.46
SMIM8-208ENST00000608535 EPB41L2O43491 1005 aaKnown RBP12.16□□□□□ -0.46
SMIM8-208ENST00000608535 KIAA1522Q9P206 1035 aaPredicted RBP12.16□□□□□ -0.46
SMIM8-208ENST00000608535 ATL2Q8NHH9 583 aa12.15□□□□□ -0.46
SMIM8-208ENST00000608535 VGLL3A8MV65 326 aa12.15□□□□□ -0.46
SMIM8-208ENST00000608535 PDE6BP35913 854 aa12.15□□□□□ -0.46
SMIM8-208ENST00000608535 RGL3Q3MIN7 710 aa12.15□□□□□ -0.46
SMIM8-208ENST00000608535 RGS3P49796 1198 aa12.15□□□□□ -0.47
SMIM8-208ENST00000608535 CXorf38Q8TB03 319 aa12.15□□□□□ -0.47
SMIM8-208ENST00000608535 ZNF513Q8N8E2 541 aaPredicted RBP12.14□□□□□ -0.47
SMIM8-208ENST00000608535 POM121Q96HA1 1249 aa12.14□□□□□ -0.47
SMIM8-208ENST00000608535 ERBB3P21860 1342 aa12.14□□□□□ -0.47
SMIM8-208ENST00000608535 GTPBP6O43824 516 aaPredicted RBP12.14□□□□□ -0.47
SMIM8-208ENST00000608535 ERCC3P19447 782 aa12.14□□□□□ -0.47
SMIM8-208ENST00000608535 ATP1B4Q9UN42 357 aaPredicted RBP12.14□□□□□ -0.47
SMIM8-208ENST00000608535 STK10O94804 968 aaKnown RBP12.13□□□□□ -0.47
SMIM8-208ENST00000608535 GOLIM4O00461 696 aa12.13□□□□□ -0.47
SMIM8-208ENST00000608535 SLC4A2P04920 1241 aa12.13□□□□□ -0.47
SMIM8-208ENST00000608535 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
SMIM8-208ENST00000608535 RPS6KL1Q9Y6S9 549 aa12.12□□□□□ -0.47
SMIM8-208ENST00000608535 GOLGA6CA6NDK9 693 aa12.12□□□□□ -0.47
SMIM8-208ENST00000608535 GOLGA6BA6NDN3 693 aa12.12□□□□□ -0.47
SMIM8-208ENST00000608535 GOLGA6DP0CG33 693 aa12.12□□□□□ -0.47
SMIM8-208ENST00000608535 CALRP27797 417 aaKnown RBP12.12□□□□□ -0.47
SMIM8-208ENST00000608535 GOLGA6AQ9NYA3 693 aa12.12□□□□□ -0.47
SMIM8-208ENST00000608535 FRMD4BQ9Y2L6 1034 aa12.12□□□□□ -0.47
SMIM8-208ENST00000608535 RHBDL3P58872 404 aa12.12□□□□□ -0.47
SMIM8-208ENST00000608535 CCDC96Q2M329 555 aa12.11□□□□□ -0.47
SMIM8-208ENST00000608535 PMM1Q92871 262 aa12.1□□□□□ -0.47
SMIM8-208ENST00000608535 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMIM8-208ENST00000608535 EIF4G1Q04637 1599 aaKnown RBP12.1□□□□□ -0.47
SMIM8-208ENST00000608535 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
SMIM8-208ENST00000608535 NRDCO43847 1150 aa12.1□□□□□ -0.47
SMIM8-208ENST00000608535 ZKSCAN2Q63HK3 967 aa12.1□□□□□ -0.47
SMIM8-208ENST00000608535 PROSER2Q86WR7 435 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms