RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 GOLGA2Q08379 1002 aa13.39□□□□□ -0.27
CTCFL-216ENST00000608263 BCL2L13Q9BXK5 485 aa13.39□□□□□ -0.27
CTCFL-216ENST00000608263 PRG4Q92954 1404 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-216ENST00000608263 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
CTCFL-216ENST00000608263 GRIN2BQ13224 1484 aa13.38□□□□□ -0.27
CTCFL-216ENST00000608263 FTSJ3Q8IY81 847 aaKnown RBP13.37□□□□□ -0.27
CTCFL-216ENST00000608263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.37□□□□□ -0.27
CTCFL-216ENST00000608263 BECN1Q14457 450 aa13.37□□□□□ -0.27
CTCFL-216ENST00000608263 APAF1O14727 1248 aa13.37□□□□□ -0.27
CTCFL-216ENST00000608263 PDE3BQ13370 1112 aa13.37□□□□□ -0.27
CTCFL-216ENST00000608263 ANKRD50Q9ULJ7 1429 aa13.37□□□□□ -0.27
CTCFL-216ENST00000608263 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
CTCFL-216ENST00000608263 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
CTCFL-216ENST00000608263 ADAMTS8Q9UP79 889 aa13.36□□□□□ -0.27
CTCFL-216ENST00000608263 CCDC144AA2RUR9 1427 aa13.36□□□□□ -0.27
CTCFL-216ENST00000608263 MORC1Q86VD1 984 aa13.36□□□□□ -0.27
CTCFL-216ENST00000608263 MAP3K1Q13233 1512 aa13.35□□□□□ -0.27
CTCFL-216ENST00000608263 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
CTCFL-216ENST00000608263 KIF21AQ7Z4S6 1674 aa13.35□□□□□ -0.27
CTCFL-216ENST00000608263 PRKCSHP14314 528 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-216ENST00000608263 TRAK1Q9UPV9 953 aa13.33□□□□□ -0.28
CTCFL-216ENST00000608263 GZF1Q9H116 711 aaPredicted RBP13.33□□□□□ -0.28
CTCFL-216ENST00000608263 PTPN23Q9H3S7 1636 aa13.33□□□□□ -0.28
CTCFL-216ENST00000608263 SNAPC4Q5SXM2 1469 aa13.33□□□□□ -0.28
CTCFL-216ENST00000608263 IL27Q8NEV9 243 aa13.32□□□□□ -0.28
CTCFL-216ENST00000608263 CFAP53Q96M91 514 aa13.32□□□□□ -0.28
CTCFL-216ENST00000608263 COG6Q9Y2V7 657 aa13.32□□□□□ -0.28
CTCFL-216ENST00000608263 ABCA10Q8WWZ4 1543 aa13.32□□□□□ -0.28
CTCFL-216ENST00000608263 EHBP1L1Q8N3D4 1523 aa13.32□□□□□ -0.28
CTCFL-216ENST00000608263 DAPK1P53355 1430 aa13.32□□□□□ -0.28
CTCFL-216ENST00000608263 RAPGEF3O95398 923 aa13.31□□□□□ -0.28
CTCFL-216ENST00000608263 EPRSP07814 1512 aaKnown RBP13.31□□□□□ -0.28
CTCFL-216ENST00000608263 NCOA1Q15788 1441 aa13.31□□□□□ -0.28
CTCFL-216ENST00000608263 U2AF1L5P0DN76 240 aaPredicted RBP13.3□□□□□ -0.28
CTCFL-216ENST00000608263 U2AF1Q01081 240 aaKnown RBP eCLIP13.3□□□□□ -0.28
CTCFL-216ENST00000608263 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
CTCFL-216ENST00000608263 HDGFP51858 240 aaKnown RBP13.29□□□□□ -0.28
CTCFL-216ENST00000608263 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
CTCFL-216ENST00000608263 SUPT6HQ7KZ85 1726 aaKnown RBP13.29□□□□□ -0.28
CTCFL-216ENST00000608263 C20orf194Q5TEA3 1177 aa13.29□□□□□ -0.28
CTCFL-216ENST00000608263 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
CTCFL-216ENST00000608263 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
CTCFL-216ENST00000608263 ABCC5O15440 1437 aa13.28□□□□□ -0.28
CTCFL-216ENST00000608263 KIAA1107Q9UPP5 1409 aa13.28□□□□□ -0.28
CTCFL-216ENST00000608263 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
CTCFL-216ENST00000608263 BRD4O60885 1362 aaPredicted RBP13.27□□□□□ -0.28
CTCFL-216ENST00000608263 ZNF608Q9ULD9 1512 aaPredicted RBP13.27□□□□□ -0.28
CTCFL-216ENST00000608263 IFT140Q96RY7 1462 aa13.27□□□□□ -0.29
CTCFL-216ENST00000608263 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
CTCFL-216ENST00000608263 MAPK8IP3Q9UPT6 1336 aa13.26□□□□□ -0.29
CTCFL-216ENST00000608263 BACH2Q9BYV9 841 aa13.26□□□□□ -0.29
CTCFL-216ENST00000608263 CENPQQ7L2Z9 268 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-216ENST00000608263 TPRNQ4KMQ1 711 aa13.25□□□□□ -0.29
CTCFL-216ENST00000608263 CENPJQ9HC77 1338 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-216ENST00000608263 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
CTCFL-216ENST00000608263 BCAR3O75815 825 aa13.24□□□□□ -0.29
CTCFL-216ENST00000608263 MFAP1P55081 439 aaKnown RBP13.24□□□□□ -0.29
CTCFL-216ENST00000608263 NFKBIBQ15653 356 aa13.24□□□□□ -0.29
CTCFL-216ENST00000608263 MS4A1P11836 297 aa13.24□□□□□ -0.29
CTCFL-216ENST00000608263 EID1Q9Y6B2 187 aa13.23□□□□□ -0.29
CTCFL-216ENST00000608263 GSE1Q14687 1217 aa13.23□□□□□ -0.29
CTCFL-216ENST00000608263 NCLP19338 710 aaKnown RBP13.23□□□□□ -0.29
CTCFL-216ENST00000608263 BRPF3Q9ULD4 1205 aa13.23□□□□□ -0.29
CTCFL-216ENST00000608263 RPRD2Q5VT52 1461 aaKnown RBP13.22□□□□□ -0.29
CTCFL-216ENST00000608263 ITPRIPQ8IWB1 547 aa13.22□□□□□ -0.29
CTCFL-216ENST00000608263 PPP2R1AP30153 589 aa13.22□□□□□ -0.29
CTCFL-216ENST00000608263 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-216ENST00000608263 APBB1O00213 710 aa13.21□□□□□ -0.3
CTCFL-216ENST00000608263 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.3
CTCFL-216ENST00000608263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTCFL-216ENST00000608263 ANP32BQ92688 251 aaKnown RBP13.2□□□□□ -0.3
CTCFL-216ENST00000608263 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
CTCFL-216ENST00000608263 CFAP70Q5T0N1 1121 aa13.2□□□□□ -0.3
CTCFL-216ENST00000608263 TROQ12816 1431 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-216ENST00000608263 C9orf84Q5VXU9 1444 aa13.2□□□□□ -0.3
CTCFL-216ENST00000608263 FRAT2O75474 233 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-216ENST00000608263 SMC4Q9NTJ3 1288 aa13.19□□□□□ -0.3
CTCFL-216ENST00000608263 THOC2Q8NI27 1593 aaKnown RBP13.19□□□□□ -0.3
CTCFL-216ENST00000608263 NAP1L5Q96NT1 182 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-216ENST00000608263 MYH16Q9H6N6 1097 aa13.18□□□□□ -0.3
CTCFL-216ENST00000608263 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
CTCFL-216ENST00000608263 ELL2O00472 640 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-216ENST00000608263 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
CTCFL-216ENST00000608263 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-216ENST00000608263 NGDNQ8NEJ9 315 aaKnown RBP13.17□□□□□ -0.3
CTCFL-216ENST00000608263 HSP90AB1P08238 724 aaKnown RBP13.17□□□□□ -0.3
CTCFL-216ENST00000608263 TMEM132EQ6IEE7 984 aa13.17□□□□□ -0.3
CTCFL-216ENST00000608263 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-216ENST00000608263 TRIM44Q96DX7 344 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-216ENST00000608263 ROCK1Q13464 1354 aa13.17□□□□□ -0.3
CTCFL-216ENST00000608263 E9PSI1 815 aa13.16□□□□□ -0.3
CTCFL-216ENST00000608263 RWDD1Q9H446 243 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-216ENST00000608263 SCAPERQ9BY12 1400 aa13.15□□□□□ -0.3
CTCFL-216ENST00000608263 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
CTCFL-216ENST00000608263 WDR62O43379 1518 aa13.14□□□□□ -0.31
CTCFL-216ENST00000608263 IQGAP2Q13576 1575 aa13.14□□□□□ -0.31
CTCFL-216ENST00000608263 HDGFL2Q7Z4V5 671 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-216ENST00000608263 UGGT2Q9NYU1 1516 aa13.14□□□□□ -0.31
CTCFL-216ENST00000608263 ARHGEF11O15085 1522 aa13.13□□□□□ -0.31
CTCFL-216ENST00000608263 CSB-PGBD3P0DP91 1061 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms