RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 ERICH6BQ5W0A0 696 aa17.71■□□□□ 0.42
SRGAP2-209ENST00000604247 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.42
SRGAP2-209ENST00000604247 ZCCHC11Q5TAX3 1644 aaKnown RBP17.7■□□□□ 0.42
SRGAP2-209ENST00000604247 SENP3-EIF4A1A0A087X0R7 540 aa17.69■□□□□ 0.42
SRGAP2-209ENST00000604247 UHRF1BP1LA0JNW5 1464 aa17.68■□□□□ 0.42
SRGAP2-209ENST00000604247 RSPH4AQ5TD94 716 aa17.66■□□□□ 0.42
SRGAP2-209ENST00000604247 FAM135AQ9P2D6 1515 aa17.66■□□□□ 0.42
SRGAP2-209ENST00000604247 B4GALNT3Q6L9W6 998 aa17.65■□□□□ 0.42
SRGAP2-209ENST00000604247 PLCH2O75038 1416 aa17.65■□□□□ 0.42
SRGAP2-209ENST00000604247 ROCK2O75116 1388 aaKnown RBP17.65■□□□□ 0.42
SRGAP2-209ENST00000604247 MYO5CQ9NQX4 1742 aa17.64■□□□□ 0.42
SRGAP2-209ENST00000604247 RGL3Q3MIN7 710 aa17.64■□□□□ 0.42
SRGAP2-209ENST00000604247 PNISRQ8TF01 805 aaKnown RBP17.64■□□□□ 0.42
SRGAP2-209ENST00000604247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.424e-8■□□□□ 10.5
SRGAP2-209ENST00000604247 MAST1Q9Y2H9 1570 aa17.64■□□□□ 0.41
SRGAP2-209ENST00000604247 TMC1Q8TDI8 760 aa17.63■□□□□ 0.41
SRGAP2-209ENST00000604247 PLEKHH2Q8IVE3 1493 aa17.63■□□□□ 0.41
SRGAP2-209ENST00000604247 TRAPPC8Q9Y2L5 1435 aa17.61■□□□□ 0.41
SRGAP2-209ENST00000604247 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
SRGAP2-209ENST00000604247 SMG6Q86US8 1419 aaKnown RBP17.61■□□□□ 0.41
SRGAP2-209ENST00000604247 CCDC144AA2RUR9 1427 aa17.6■□□□□ 0.41
SRGAP2-209ENST00000604247 NBPF1Q3BBV0 1214 aa17.6■□□□□ 0.41
SRGAP2-209ENST00000604247 NUDCQ9Y266 331 aa17.59■□□□□ 0.41
SRGAP2-209ENST00000604247 PLXNC1O60486 1568 aa17.58■□□□□ 0.41
SRGAP2-209ENST00000604247 UNC13BO14795 1591 aa17.58■□□□□ 0.4
SRGAP2-209ENST00000604247 MSH5O43196 834 aa17.58■□□□□ 0.4
SRGAP2-209ENST00000604247 EFCAB2Q5VUJ9 269 aa17.57■□□□□ 0.4
SRGAP2-209ENST00000604247 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
SRGAP2-209ENST00000604247 ABCC1P33527 1531 aa17.57■□□□□ 0.4
SRGAP2-209ENST00000604247 TRPM1Q7Z4N2 1603 aa17.55■□□□□ 0.4
SRGAP2-209ENST00000604247 AFAP1Q8N556 730 aa17.55■□□□□ 0.4
SRGAP2-209ENST00000604247 MYBBP1AQ9BQG0 1328 aaKnown RBP17.54■□□□□ 0.4
SRGAP2-209ENST00000604247 RALBP1Q15311 655 aa17.54■□□□□ 0.4
SRGAP2-209ENST00000604247 E9PCH4 1651 aa17.53■□□□□ 0.4
SRGAP2-209ENST00000604247 DUOX2Q9NRD8 1548 aa17.53■□□□□ 0.4
SRGAP2-209ENST00000604247 A2MP01023 1474 aa17.52■□□□□ 0.4
SRGAP2-209ENST00000604247 LRPPRCP42704 1394 aaKnown RBP17.52■□□□□ 0.4
SRGAP2-209ENST00000604247 RNF123Q5XPI4 1314 aa17.52■□□□□ 0.39
SRGAP2-209ENST00000604247 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.39
SRGAP2-209ENST00000604247 BRD4O60885 1362 aaPredicted RBP17.52■□□□□ 0.39
SRGAP2-209ENST00000604247 MAGI2Q86UL8 1455 aa17.51■□□□□ 0.39
SRGAP2-209ENST00000604247 WDR7Q9Y4E6 1490 aa17.51■□□□□ 0.39
SRGAP2-209ENST00000604247 IQGAP3Q86VI3 1631 aa17.51■□□□□ 0.39
SRGAP2-209ENST00000604247 KTN1Q86UP2 1357 aaKnown RBP17.5■□□□□ 0.39
SRGAP2-209ENST00000604247 ERBINQ96RT1 1412 aa17.5■□□□□ 0.39
SRGAP2-209ENST00000604247 PER1O15534 1290 aaPredicted RBP17.49■□□□□ 0.39
SRGAP2-209ENST00000604247 TESK2Q96S53 571 aa17.48■□□□□ 0.39
SRGAP2-209ENST00000604247 GPRASP1Q5JY77 1395 aa17.48■□□□□ 0.39
SRGAP2-209ENST00000604247 SPAG9O60271 1321 aaKnown RBP17.47■□□□□ 0.39
SRGAP2-209ENST00000604247 SALL2Q9Y467 1007 aaPredicted RBP17.47■□□□□ 0.39
SRGAP2-209ENST00000604247 ZFYVE16Q7Z3T8 1539 aa17.46■□□□□ 0.39
SRGAP2-209ENST00000604247 DISP3Q9P2K9 1392 aa17.46■□□□□ 0.39
SRGAP2-209ENST00000604247 ARAP3Q8WWN8 1544 aa17.46■□□□□ 0.39
SRGAP2-209ENST00000604247 PARD3Q8TEW0 1356 aa17.45■□□□□ 0.38
SRGAP2-209ENST00000604247 NLRP13Q86W25 1043 aa17.45■□□□□ 0.38
SRGAP2-209ENST00000604247 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
SRGAP2-209ENST00000604247 FANCAO15360 1455 aa17.44■□□□□ 0.38
SRGAP2-209ENST00000604247 ASXL2Q76L83 1435 aa17.44■□□□□ 0.38
SRGAP2-209ENST00000604247 CC2D1BQ5T0F9 858 aaKnown RBP17.44■□□□□ 0.38
SRGAP2-209ENST00000604247 PRDM15P57071 1507 aaPredicted RBP17.43■□□□□ 0.38
SRGAP2-209ENST00000604247 ATP10AO60312 1499 aa17.43■□□□□ 0.38
SRGAP2-209ENST00000604247 ABCA9Q8IUA7 1624 aa17.43■□□□□ 0.38
SRGAP2-209ENST00000604247 PANK3Q9H999 370 aa17.43■□□□□ 0.38
SRGAP2-209ENST00000604247 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
SRGAP2-209ENST00000604247 RTEL1-TNFRSF6BF6WH68 1400 aa17.42■□□□□ 0.38
SRGAP2-209ENST00000604247 LAMC1P11047 1609 aa17.4■□□□□ 0.38
SRGAP2-209ENST00000604247 TMF1P82094 1093 aa17.39■□□□□ 0.37
SRGAP2-209ENST00000604247 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
SRGAP2-209ENST00000604247 SCAPERQ9BY12 1400 aa17.39■□□□□ 0.37
SRGAP2-209ENST00000604247 EIF2AK4Q9P2K8 1649 aaKnown RBP17.38■□□□□ 0.37
SRGAP2-209ENST00000604247 INO80Q9ULG1 1556 aaPredicted RBP17.37■□□□□ 0.37
SRGAP2-209ENST00000604247 ADGRL1O94910 1474 aa17.37■□□□□ 0.37
SRGAP2-209ENST00000604247 ATP7AQ04656 1500 aa17.37■□□□□ 0.37
SRGAP2-209ENST00000604247 WASHC2CQ9Y4E1 1318 aa17.36■□□□□ 0.37
SRGAP2-209ENST00000604247 CDCA7LQ96GN5 454 aa17.36■□□□□ 0.37
SRGAP2-209ENST00000604247 RCAN3Q9UKA8 241 aa17.36■□□□□ 0.37
SRGAP2-209ENST00000604247 RRP1P56182 461 aaKnown RBP17.35■□□□□ 0.37
SRGAP2-209ENST00000604247 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
SRGAP2-209ENST00000604247 DEPDC5O75140 1603 aa17.34■□□□□ 0.37
SRGAP2-209ENST00000604247 EXOC6Q8TAG9 804 aa17.32■□□□□ 0.36
SRGAP2-209ENST00000604247 PTPRTO14522 1441 aa17.32■□□□□ 0.36
SRGAP2-209ENST00000604247 KIF3BO15066 747 aa17.32■□□□□ 0.36
SRGAP2-209ENST00000604247 PDE3BQ13370 1112 aa17.32■□□□□ 0.36
SRGAP2-209ENST00000604247 VWDEQ8N2E2 1590 aa17.31■□□□□ 0.36
SRGAP2-209ENST00000604247 MROH1Q8NDA8 1641 aa17.31■□□□□ 0.36
SRGAP2-209ENST00000604247 RNF17Q9BXT8 1623 aaKnown RBP17.31■□□□□ 0.36
SRGAP2-209ENST00000604247 TRPM2O94759 1503 aa17.29■□□□□ 0.36
SRGAP2-209ENST00000604247 MADDQ8WXG6 1647 aa17.29■□□□□ 0.36
SRGAP2-209ENST00000604247 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
SRGAP2-209ENST00000604247 MYT1LQ9UL68 1186 aa17.28■□□□□ 0.36
SRGAP2-209ENST00000604247 KIDINS220Q9ULH0 1771 aa17.27■□□□□ 0.36
SRGAP2-209ENST00000604247 ADAMTS8Q9UP79 889 aa17.27■□□□□ 0.35
SRGAP2-209ENST00000604247 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
SRGAP2-209ENST00000604247 KNSTRNQ9Y448 316 aa17.26■□□□□ 0.35
SRGAP2-209ENST00000604247 UGGT1Q9NYU2 1555 aa17.26■□□□□ 0.35
SRGAP2-209ENST00000604247 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
SRGAP2-209ENST00000604247 TET3O43151 1660 aa17.25■□□□□ 0.35
SRGAP2-209ENST00000604247 IQGAP1P46940 1657 aa17.25■□□□□ 0.35
SRGAP2-209ENST00000604247 CEP152O94986 1710 aa17.25■□□□□ 0.35
SRGAP2-209ENST00000604247 PLIN1O60240 522 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms