RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 STK26Q9P289 416 aa26.2■■□□□ 1.78
SH3D19-211ENST00000604030 GSE1Q14687 1217 aa26.2■■□□□ 1.78
SH3D19-211ENST00000604030 FHOD3Q2V2M9 1422 aa26.18■■□□□ 1.78
SH3D19-211ENST00000604030 ATP6V1DQ9Y5K8 247 aa26.17■■□□□ 1.78
SH3D19-211ENST00000604030 CCDC144AA2RUR9 1427 aa26.15■■□□□ 1.78
SH3D19-211ENST00000604030 TRIM6-TRIM34B2RNG4 842 aa26.15■■□□□ 1.78
SH3D19-211ENST00000604030 SOX12O15370 315 aa26.14■■□□□ 1.78
SH3D19-211ENST00000604030 AAMPQ13685 434 aa26.13■■□□□ 1.77
SH3D19-211ENST00000604030 KIF16BQ96L93 1317 aa26.13■■□□□ 1.77
SH3D19-211ENST00000604030 TULP1O00294 542 aaPredicted RBP26.12■■□□□ 1.77
SH3D19-211ENST00000604030 ZKSCAN2Q63HK3 967 aa26.12■■□□□ 1.77
SH3D19-211ENST00000604030 GOLGA6L1Q8N7Z2 621 aa26.11■■□□□ 1.77
SH3D19-211ENST00000604030 CLUAP1Q96AJ1 413 aa26.11■■□□□ 1.77
SH3D19-211ENST00000604030 TDRD9Q8NDG6 1382 aaKnown RBP26.11■■□□□ 1.77
SH3D19-211ENST00000604030 CCDC146Q8IYE0 955 aa26.1■■□□□ 1.77
SH3D19-211ENST00000604030 ST20-MTHFSA0A0A6YYL1 179 aa26.08■■□□□ 1.77
SH3D19-211ENST00000604030 HSP90AA2PQ14568 343 aaPredicted RBP26.08■■□□□ 1.77
SH3D19-211ENST00000604030 USP47Q96K76 1375 aa26.08■■□□□ 1.76
SH3D19-211ENST00000604030 WIZO95785 1651 aa26.07■■□□□ 1.76
SH3D19-211ENST00000604030 KIF3BO15066 747 aa26.07■■□□□ 1.76
SH3D19-211ENST00000604030 CADPSQ9ULU8 1353 aa26.06■■□□□ 1.76
SH3D19-211ENST00000604030 HSP90B1P14625 803 aaKnown RBP26.06■■□□□ 1.76
SH3D19-211ENST00000604030 PANK3Q9H999 370 aa26.06■■□□□ 1.76
SH3D19-211ENST00000604030 GORABQ5T7V8 394 aa26.05■■□□□ 1.76
SH3D19-211ENST00000604030 TNNT3P45378 269 aaPredicted RBP26.05■■□□□ 1.76
SH3D19-211ENST00000604030 DDX49Q9Y6V7 483 aaKnown RBP26.05■■□□□ 1.76
SH3D19-211ENST00000604030 STAC3Q96MF2 364 aa26.04■■□□□ 1.76
SH3D19-211ENST00000604030 EXOC6Q8TAG9 804 aa26.03■■□□□ 1.76
SH3D19-211ENST00000604030 DDX19BQ9UMR2 479 aa26.01■■□□□ 1.75
SH3D19-211ENST00000604030 HNRNPMP52272 730 aaKnown RBP eCLIP26.01■■□□□ 1.754e-7■■■□□ 17.7
SH3D19-211ENST00000604030 CRBNQ96SW2 442 aa26.01■■□□□ 1.75
SH3D19-211ENST00000604030 CHMP5Q9NZZ3 219 aa26■■□□□ 1.75
SH3D19-211ENST00000604030 REC8O95072 547 aa25.99■■□□□ 1.75
SH3D19-211ENST00000604030 MLECQ14165 292 aa25.99■■□□□ 1.75
SH3D19-211ENST00000604030 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.99■■□□□ 1.75
SH3D19-211ENST00000604030 SLC4A10Q6U841 1118 aa25.98■■□□□ 1.75
SH3D19-211ENST00000604030 TPM3P06753 285 aa25.98■■□□□ 1.75
SH3D19-211ENST00000604030 NOC3LQ8WTT2 800 aaKnown RBP25.98■■□□□ 1.75
SH3D19-211ENST00000604030 ROCK1Q13464 1354 aa25.96■■□□□ 1.75
SH3D19-211ENST00000604030 EVC2Q86UK5 1308 aa25.95■■□□□ 1.74
SH3D19-211ENST00000604030 PAK3O75914 559 aaPredicted RBP25.95■■□□□ 1.74
SH3D19-211ENST00000604030 SF3A1Q15459 793 aaKnown RBP25.94■■□□□ 1.74
SH3D19-211ENST00000604030 CSB-PGBD3P0DP91 1061 aa25.94■■□□□ 1.74
SH3D19-211ENST00000604030 TAF7LQ5H9L4 462 aa25.94■■□□□ 1.74
SH3D19-211ENST00000604030 ANKRD45Q5TZF3 282 aa25.94■■□□□ 1.74
SH3D19-211ENST00000604030 FOXD4L1Q9NU39 408 aa25.93■■□□□ 1.74
SH3D19-211ENST00000604030 RUFY2Q8WXA3 655 aa25.92■■□□□ 1.74
SH3D19-211ENST00000604030 API5Q9BZZ5 524 aaKnown RBP25.92■■□□□ 1.74
SH3D19-211ENST00000604030 WASHC2CQ9Y4E1 1318 aa25.92■■□□□ 1.74
SH3D19-211ENST00000604030 GOLGA6L19H0YKK7 550 aa25.92■■□□□ 1.74
SH3D19-211ENST00000604030 CUX1P39880 1505 aa25.91■■□□□ 1.74
SH3D19-211ENST00000604030 MIA2Q96PC5 1412 aa25.91■■□□□ 1.74
SH3D19-211ENST00000604030 LRRFIP1Q32MZ4 808 aaKnown RBP25.91■■□□□ 1.74
SH3D19-211ENST00000604030 CNTLNQ9NXG0 1405 aa25.9■■□□□ 1.74
SH3D19-211ENST00000604030 AMPHP49418 695 aa25.9■■□□□ 1.74
SH3D19-211ENST00000604030 VGFO15240 615 aaPredicted RBP25.9■■□□□ 1.74
SH3D19-211ENST00000604030 ISY1Q9ULR0 285 aaKnown RBP25.9■■□□□ 1.74
SH3D19-211ENST00000604030 MYOM3Q5VTT5 1437 aa25.9■■□□□ 1.74
SH3D19-211ENST00000604030 EID1Q9Y6B2 187 aa25.9■■□□□ 1.74
SH3D19-211ENST00000604030 CCDC7Q96M83 1385 aa25.89■■□□□ 1.74
SH3D19-211ENST00000604030 H3BQV1 296 aa25.88■■□□□ 1.73
SH3D19-211ENST00000604030 NUCB2P80303 420 aa25.88■■□□□ 1.73
SH3D19-211ENST00000604030 IFFO2Q5TF58 517 aa25.88■■□□□ 1.73
SH3D19-211ENST00000604030 CLSTN1O94985 981 aa25.87■■□□□ 1.73
SH3D19-211ENST00000604030 COG6Q9Y2V7 657 aa25.87■■□□□ 1.73
SH3D19-211ENST00000604030 GPS2Q13227 327 aa25.87■■□□□ 1.73
SH3D19-211ENST00000604030 DZIP1LQ8IYY4 767 aaKnown RBP25.86■■□□□ 1.73
SH3D19-211ENST00000604030 BECN2A8MW95 431 aa25.86■■□□□ 1.73
SH3D19-211ENST00000604030 NOL8Q76FK4 1167 aaKnown RBP25.86■■□□□ 1.73
SH3D19-211ENST00000604030 FAM184AQ8NB25 1140 aa25.86■■□□□ 1.73
SH3D19-211ENST00000604030 NGDNQ8NEJ9 315 aaKnown RBP25.86■■□□□ 1.73
SH3D19-211ENST00000604030 CHMP3Q9Y3E7 222 aa25.86■■□□□ 1.73
SH3D19-211ENST00000604030 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
SH3D19-211ENST00000604030 PLIN1O60240 522 aa25.85■■□□□ 1.73
SH3D19-211ENST00000604030 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.85■■□□□ 1.73
SH3D19-211ENST00000604030 TRAK1Q9UPV9 953 aa25.85■■□□□ 1.73
SH3D19-211ENST00000604030 RASSF8Q8NHQ8 419 aa25.84■■□□□ 1.73
SH3D19-211ENST00000604030 SMARCA4P51532 1647 aa25.84■■□□□ 1.73
SH3D19-211ENST00000604030 RRP7AQ9Y3A4 280 aaKnown RBP25.84■■□□□ 1.73
SH3D19-211ENST00000604030 ARID3AQ99856 593 aa25.83■■□□□ 1.73
SH3D19-211ENST00000604030 BRD4O60885 1362 aaPredicted RBP25.83■■□□□ 1.73
SH3D19-211ENST00000604030 APAF1O14727 1248 aa25.83■■□□□ 1.73
SH3D19-211ENST00000604030 TPM1P09493 284 aa25.83■■□□□ 1.73
SH3D19-211ENST00000604030 COG3Q96JB2 828 aa25.83■■□□□ 1.73
SH3D19-211ENST00000604030 ZKSCAN1P17029 563 aaPredicted RBP25.82■■□□□ 1.72
SH3D19-211ENST00000604030 CPLX2Q6PUV4 134 aaKnown RBP25.82■■□□□ 1.72
SH3D19-211ENST00000604030 TSR1Q2NL82 804 aaKnown RBP25.81■■□□□ 1.72
SH3D19-211ENST00000604030 RILPL2Q969X0 211 aa25.81■■□□□ 1.72
SH3D19-211ENST00000604030 JPH4Q96JJ6 628 aa25.81■■□□□ 1.72
SH3D19-211ENST00000604030 DIAPH3Q9NSV4 1193 aa25.81■■□□□ 1.72
SH3D19-211ENST00000604030 FGD6Q6ZV73 1430 aa25.81■■□□□ 1.72
SH3D19-211ENST00000604030 RUNDC1Q96C34 613 aa25.81■■□□□ 1.72
SH3D19-211ENST00000604030 SLC4A3P48751 1232 aa25.79■■□□□ 1.72
SH3D19-211ENST00000604030 A0A0U1RQG5 324 aaPredicted RBP25.78■■□□□ 1.72
SH3D19-211ENST00000604030 INTS3Q68E01 1043 aaKnown RBP25.78■■□□□ 1.72
SH3D19-211ENST00000604030 CCDC70Q6NSX1 233 aa25.78■■□□□ 1.72
SH3D19-211ENST00000604030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.77■■□□□ 1.726e-19■□□□□ 9.8
SH3D19-211ENST00000604030 TMX4Q9H1E5 349 aaPredicted RBP25.77■■□□□ 1.72
SH3D19-211ENST00000604030 DIAPH1O60610 1272 aaKnown RBP25.76■■□□□ 1.71
SH3D19-211ENST00000604030 BCL2L13Q9BXK5 485 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms