RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 EPAS1Q99814 870 aa13.79□□□□□ -0.2
TUBE1-205ENST00000603651 KCNV2Q8TDN2 545 aa13.78□□□□□ -0.2
TUBE1-205ENST00000603651 TK2O00142 265 aa13.76□□□□□ -0.21
TUBE1-205ENST00000603651 VPS9D1Q9Y2B5 631 aa13.75□□□□□ -0.21
TUBE1-205ENST00000603651 COL9A1P20849 921 aa13.74□□□□□ -0.21
TUBE1-205ENST00000603651 ARIH1Q9Y4X5 557 aaPredicted RBP13.74□□□□□ -0.21
TUBE1-205ENST00000603651 MAP3K7O43318 606 aa13.73□□□□□ -0.21
TUBE1-205ENST00000603651 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
TUBE1-205ENST00000603651 C6orf132Q5T0Z8 1188 aa13.72□□□□□ -0.21
TUBE1-205ENST00000603651 HRO43593 1189 aa13.71□□□□□ -0.21
TUBE1-205ENST00000603651 PPP1R3GB7ZBB8 358 aa13.7□□□□□ -0.22
TUBE1-205ENST00000603651 PROX2Q3B8N5 592 aa13.7□□□□□ -0.22
TUBE1-205ENST00000603651 ARHGEF1Q92888 912 aaKnown RBP13.7□□□□□ -0.22
TUBE1-205ENST00000603651 TSR1Q2NL82 804 aaKnown RBP13.69□□□□□ -0.22
TUBE1-205ENST00000603651 EN1Q05925 392 aaPredicted RBP13.68□□□□□ -0.22
TUBE1-205ENST00000603651 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
TUBE1-205ENST00000603651 P3H3Q8IVL6 736 aa13.66□□□□□ -0.22
TUBE1-205ENST00000603651 KCTD12Q96CX2 325 aaKnown RBP13.66□□□□□ -0.22
TUBE1-205ENST00000603651 SLC4A5Q9BY07 1137 aa13.65□□□□□ -0.22
TUBE1-205ENST00000603651 GOLGA8CPA6NN73 597 aa13.64□□□□□ -0.23
TUBE1-205ENST00000603651 MLLT3P42568 568 aaPredicted RBP13.63□□□□□ -0.23
TUBE1-205ENST00000603651 KDM2AQ9Y2K7 1162 aa13.63□□□□□ -0.23
TUBE1-205ENST00000603651 MRPL50Q8N5N7 158 aaKnown RBP13.62□□□□□ -0.23
TUBE1-205ENST00000603651 OSBPP22059 807 aa13.61□□□□□ -0.23
TUBE1-205ENST00000603651 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
TUBE1-205ENST00000603651 CDHR5Q9HBB8 845 aa13.59□□□□□ -0.23
TUBE1-205ENST00000603651 KIAA1468Q9P260 1216 aa13.59□□□□□ -0.23
TUBE1-205ENST00000603651 BHMG1C9JSJ3 638 aaPredicted RBP13.57□□□□□ -0.24
TUBE1-205ENST00000603651 RABGEF1Q9UJ41 708 aa13.57□□□□□ -0.24
TUBE1-205ENST00000603651 SEMA3EO15041 775 aa13.56□□□□□ -0.24
TUBE1-205ENST00000603651 TRIM6-TRIM34B2RNG4 842 aa13.55□□□□□ -0.24
TUBE1-205ENST00000603651 SEPT9Q9UHD8 586 aaPredicted RBP13.55□□□□□ -0.24
TUBE1-205ENST00000603651 PTPN5P54829 565 aa13.54□□□□□ -0.24
TUBE1-205ENST00000603651 WNT2BQ93097 391 aa13.54□□□□□ -0.24
TUBE1-205ENST00000603651 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
TUBE1-205ENST00000603651 HCSTQ9UBK5 93 aa13.51□□□□□ -0.25
TUBE1-205ENST00000603651 TSKSQ9UJT2 592 aa13.51□□□□□ -0.25
TUBE1-205ENST00000603651 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
TUBE1-205ENST00000603651 PRSS12P56730 875 aa13.49□□□□□ -0.25
TUBE1-205ENST00000603651 PACS2Q86VP3 889 aa13.49□□□□□ -0.25
TUBE1-205ENST00000603651 SMAPO00193 183 aa13.48□□□□□ -0.25
TUBE1-205ENST00000603651 NUTM2FA1L443 756 aa13.47□□□□□ -0.25
TUBE1-205ENST00000603651 ONECUT3O60422 494 aaPredicted RBP13.46□□□□□ -0.25
TUBE1-205ENST00000603651 ANKK1Q8NFD2 765 aa13.46□□□□□ -0.25
TUBE1-205ENST00000603651 CERKQ8TCT0 537 aa13.46□□□□□ -0.25
TUBE1-205ENST00000603651 FAM198AQ9UFP1 575 aa13.46□□□□□ -0.25
TUBE1-205ENST00000603651 THSD4Q6ZMP0 1018 aa13.45□□□□□ -0.26
TUBE1-205ENST00000603651 BCAMP50895 628 aa13.43□□□□□ -0.26
TUBE1-205ENST00000603651 PADI6Q6TGC4 694 aa13.43□□□□□ -0.26
TUBE1-205ENST00000603651 ZFRQ96KR1 1074 aaKnown RBP13.43□□□□□ -0.26
TUBE1-205ENST00000603651 PNMA3Q9UL41 463 aa13.43□□□□□ -0.26
TUBE1-205ENST00000603651 LAPTM4BQ86VI4 370 aa13.42□□□□□ -0.26
TUBE1-205ENST00000603651 NPDC1Q9NQX5 325 aaPredicted RBP13.41□□□□□ -0.26
TUBE1-205ENST00000603651 C3orf80F5H4A9 247 aa13.4□□□□□ -0.26
TUBE1-205ENST00000603651 FAM98CQ17RN3 349 aaKnown RBP13.4□□□□□ -0.26
TUBE1-205ENST00000603651 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
TUBE1-205ENST00000603651 TESPA1A2RU30 521 aaPredicted RBP13.38□□□□□ -0.27
TUBE1-205ENST00000603651 NUDT18Q6ZVK8 323 aa13.38□□□□□ -0.27
TUBE1-205ENST00000603651 TATDN2Q93075 761 aa13.38□□□□□ -0.27
TUBE1-205ENST00000603651 RBM26Q5T8P6 1007 aaKnown RBP13.37□□□□□ -0.27
TUBE1-205ENST00000603651 SMYD5Q6GMV2 418 aa13.36□□□□□ -0.27
TUBE1-205ENST00000603651 LRCH3Q96II8 777 aa13.35□□□□□ -0.27
TUBE1-205ENST00000603651 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.35□□□□□ -0.27
TUBE1-205ENST00000603651 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
TUBE1-205ENST00000603651 SOWAHBA6NEL2 793 aa13.34□□□□□ -0.27
TUBE1-205ENST00000603651 PTGDRQ13258 359 aa13.34□□□□□ -0.27
TUBE1-205ENST00000603651 RNF40O75150 1001 aa13.32□□□□□ -0.28
TUBE1-205ENST00000603651 SAMD7Q7Z3H4 446 aa13.32□□□□□ -0.28
TUBE1-205ENST00000603651 RBM27Q9P2N5 1060 aaKnown RBP13.32□□□□□ -0.28
TUBE1-205ENST00000603651 HPS5Q9UPZ3 1129 aa13.32□□□□□ -0.28
TUBE1-205ENST00000603651 FCHSD2O94868 740 aa13.3□□□□□ -0.28
TUBE1-205ENST00000603651 WBP1LQ9NX94 342 aa13.3□□□□□ -0.28
TUBE1-205ENST00000603651 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
TUBE1-205ENST00000603651 TTC13Q8NBP0 860 aa13.28□□□□□ -0.28
TUBE1-205ENST00000603651 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
TUBE1-205ENST00000603651 TSR3Q9UJK0 312 aaKnown RBP13.25□□□□□ -0.29
TUBE1-205ENST00000603651 PPP4CP60510 307 aa13.23□□□□□ -0.29
TUBE1-205ENST00000603651 SWT1Q5T5J6 900 aaKnown RBP13.22□□□□□ -0.29
TUBE1-205ENST00000603651 TULP1O00294 542 aaPredicted RBP13.21□□□□□ -0.29
TUBE1-205ENST00000603651 GPIHBP1Q8IV16 184 aa13.21□□□□□ -0.29
TUBE1-205ENST00000603651 RBM46Q8TBY0 533 aaKnown RBP13.2□□□□□ -0.3
TUBE1-205ENST00000603651 EYA1Q99502 592 aa13.2□□□□□ -0.3
TUBE1-205ENST00000603651 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
TUBE1-205ENST00000603651 HIC1Q14526 733 aa13.19□□□□□ -0.3
TUBE1-205ENST00000603651 FECHP22830 423 aa13.18□□□□□ -0.3
TUBE1-205ENST00000603651 GNPATO15228 680 aa13.15□□□□□ -0.3
TUBE1-205ENST00000603651 DNAJB2P25686 324 aa13.14□□□□□ -0.31
TUBE1-205ENST00000603651 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
TUBE1-205ENST00000603651 RCCD1A6NED2 376 aa13.13□□□□□ -0.31
TUBE1-205ENST00000603651 GPR37O15354 613 aa13.13□□□□□ -0.31
TUBE1-205ENST00000603651 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
TUBE1-205ENST00000603651 SLF2Q8IX21 1173 aa13.13□□□□□ -0.31
TUBE1-205ENST00000603651 OATP04181 439 aa13.09□□□□□ -0.31
TUBE1-205ENST00000603651 APLP1P51693 650 aa13.08□□□□□ -0.32
TUBE1-205ENST00000603651 PXYLP1Q8TE99 480 aa13.08□□□□□ -0.32
TUBE1-205ENST00000603651 NLRP7Q8WX94 980 aa13.08□□□□□ -0.32
TUBE1-205ENST00000603651 TMEM134Q9H6X4 195 aa13.07□□□□□ -0.32
TUBE1-205ENST00000603651 KCNC4Q03721 635 aa13.06□□□□□ -0.32
TUBE1-205ENST00000603651 METTL3Q86U44 580 aaKnown RBP13.06□□□□□ -0.32
TUBE1-205ENST00000603651 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms