RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 SENP3-EIF4A1A0A087X0R7 540 aa15.11■□□□□ 0.01
SCN1B-205ENST00000602150 ADGRL2O95490 1459 aa15.11■□□□□ 0.01
SCN1B-205ENST00000602150 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
SCN1B-205ENST00000602150 CROCC2H7BZ55 1655 aa15.11■□□□□ 0.01
SCN1B-205ENST00000602150 ADGBQ8N7X0 1667 aa15.1■□□□□ 0.01
SCN1B-205ENST00000602150 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
SCN1B-205ENST00000602150 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
SCN1B-205ENST00000602150 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
SCN1B-205ENST00000602150 EIF4G2P78344 907 aaKnown RBP eCLIP15.08■□□□□ 0.01
SCN1B-205ENST00000602150 ABCC1P33527 1531 aa15.08■□□□□ 0
SCN1B-205ENST00000602150 C11orf95C9JLR9 678 aaPredicted RBP15.07■□□□□ 0
SCN1B-205ENST00000602150 TSPOAP1O95153 1857 aa15.07■□□□□ 0
SCN1B-205ENST00000602150 SHANK2Q9UPX8 1470 aa15.07■□□□□ 0
SCN1B-205ENST00000602150 CARD11Q9BXL7 1154 aa15.06■□□□□ 0
SCN1B-205ENST00000602150 CFAP65Q6ZU64 1925 aaKnown RBP15.05■□□□□ 0
SCN1B-205ENST00000602150 TIMELESSQ9UNS1 1208 aa15.05■□□□□ -0
SCN1B-205ENST00000602150 ARHGEF5Q12774 1597 aa15.05■□□□□ -0
SCN1B-205ENST00000602150 NBPF1Q3BBV0 1214 aa15.05■□□□□ -0
SCN1B-205ENST00000602150 FAM135AQ9P2D6 1515 aa15.05■□□□□ -0
SCN1B-205ENST00000602150 RPRD2Q5VT52 1461 aaKnown RBP15.04■□□□□ -0
SCN1B-205ENST00000602150 CCDC144AA2RUR9 1427 aa15.04■□□□□ -0
SCN1B-205ENST00000602150 PRKCSHP14314 528 aaPredicted RBP15.02□□□□□ -0.01
SCN1B-205ENST00000602150 ANP32CO43423 234 aa15.01□□□□□ -0.01
SCN1B-205ENST00000602150 WASHC2CQ9Y4E1 1318 aa15.01□□□□□ -0.01
SCN1B-205ENST00000602150 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
SCN1B-205ENST00000602150 ARID4BQ4LE39 1312 aaPredicted RBP14.99□□□□□ -0.01
SCN1B-205ENST00000602150 ATP7AQ04656 1500 aa14.99□□□□□ -0.01
SCN1B-205ENST00000602150 ABCA9Q8IUA7 1624 aa14.99□□□□□ -0.01
SCN1B-205ENST00000602150 YEATS2Q9ULM3 1422 aa14.98□□□□□ -0.01
SCN1B-205ENST00000602150 TEX14Q8IWB6 1497 aa14.98□□□□□ -0.01
SCN1B-205ENST00000602150 ZFYVE16Q7Z3T8 1539 aa14.98□□□□□ -0.01
SCN1B-205ENST00000602150 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
SCN1B-205ENST00000602150 DUOX2Q9NRD8 1548 aa14.97□□□□□ -0.01
SCN1B-205ENST00000602150 KANK1Q14678 1352 aa14.97□□□□□ -0.01
SCN1B-205ENST00000602150 ERICH6BQ5W0A0 696 aa14.96□□□□□ -0.02
SCN1B-205ENST00000602150 ROCK2O75116 1388 aaKnown RBP14.95□□□□□ -0.02
SCN1B-205ENST00000602150 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
SCN1B-205ENST00000602150 UGGT1Q9NYU2 1555 aa14.94□□□□□ -0.02
SCN1B-205ENST00000602150 DHX29Q7Z478 1369 aaKnown RBP14.94□□□□□ -0.02
SCN1B-205ENST00000602150 USP47Q96K76 1375 aa14.94□□□□□ -0.02
SCN1B-205ENST00000602150 ERICH6Q7L0X2 663 aa14.94□□□□□ -0.02
SCN1B-205ENST00000602150 DEKP35659 375 aaKnown RBP14.94□□□□□ -0.02
SCN1B-205ENST00000602150 ZNF518AQ6AHZ1 1483 aa14.93□□□□□ -0.02
SCN1B-205ENST00000602150 FBXO31Q5XUX0 539 aaPredicted RBP14.93□□□□□ -0.02
SCN1B-205ENST00000602150 POGZQ7Z3K3 1410 aa14.93□□□□□ -0.02
SCN1B-205ENST00000602150 ERBINQ96RT1 1412 aa14.91□□□□□ -0.02
SCN1B-205ENST00000602150 A2MP01023 1474 aa14.91□□□□□ -0.02
SCN1B-205ENST00000602150 KIF7Q2M1P5 1343 aa14.91□□□□□ -0.02
SCN1B-205ENST00000602150 SAFB2Q14151 953 aaKnown RBP eCLIP14.9□□□□□ -0.02
SCN1B-205ENST00000602150 CFAP70Q5T0N1 1121 aa14.88□□□□□ -0.03
SCN1B-205ENST00000602150 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
SCN1B-205ENST00000602150 PLXNC1O60486 1568 aa14.87□□□□□ -0.03
SCN1B-205ENST00000602150 CCDC184Q52MB2 194 aa14.87□□□□□ -0.03
SCN1B-205ENST00000602150 MAST1Q9Y2H9 1570 aa14.87□□□□□ -0.03
SCN1B-205ENST00000602150 IRX6P78412 446 aaPredicted RBP14.87□□□□□ -0.03
SCN1B-205ENST00000602150 TMEM132EQ6IEE7 984 aa14.87□□□□□ -0.03
SCN1B-205ENST00000602150 PPP4R2Q9NY27 417 aa14.87□□□□□ -0.03
SCN1B-205ENST00000602150 KIDINS220Q9ULH0 1771 aa14.87□□□□□ -0.03
SCN1B-205ENST00000602150 RTEL1-TNFRSF6BF6WH68 1400 aa14.86□□□□□ -0.03
SCN1B-205ENST00000602150 FAM9BQ8IZU0 186 aa14.86□□□□□ -0.03
SCN1B-205ENST00000602150 ADGRF5Q8IZF2 1346 aa14.85□□□□□ -0.03
SCN1B-205ENST00000602150 HNRNPUQ00839 825 aaKnown RBP eCLIP14.85□□□□□ -0.03
SCN1B-205ENST00000602150 ESF1Q9H501 851 aaKnown RBP14.85□□□□□ -0.03
SCN1B-205ENST00000602150 CCDC7Q96M83 1385 aa14.84□□□□□ -0.03
SCN1B-205ENST00000602150 STK26Q9P289 416 aa14.84□□□□□ -0.03
SCN1B-205ENST00000602150 INO80Q9ULG1 1556 aaPredicted RBP14.83□□□□□ -0.03
SCN1B-205ENST00000602150 ATP10AO60312 1499 aa14.83□□□□□ -0.04
SCN1B-205ENST00000602150 COL17A1Q9UMD9 1497 aaPredicted RBP14.83□□□□□ -0.04
SCN1B-205ENST00000602150 ARAP3Q8WWN8 1544 aa14.82□□□□□ -0.04
SCN1B-205ENST00000602150 TRAK1Q9UPV9 953 aa14.82□□□□□ -0.04
SCN1B-205ENST00000602150 UNC13BO14795 1591 aa14.82□□□□□ -0.04
SCN1B-205ENST00000602150 CEBPAP49715 358 aaPredicted RBP14.82□□□□□ -0.04
SCN1B-205ENST00000602150 KDM5DQ9BY66 1539 aa14.81□□□□□ -0.04
SCN1B-205ENST00000602150 ABCA6Q8N139 1617 aa14.81□□□□□ -0.04
SCN1B-205ENST00000602150 DIP2BQ9P265 1576 aa14.8□□□□□ -0.04
SCN1B-205ENST00000602150 E9PCH4 1651 aa14.8□□□□□ -0.04
SCN1B-205ENST00000602150 IQGAP3Q86VI3 1631 aa14.79□□□□□ -0.04
SCN1B-205ENST00000602150 IDI1Q13907 227 aa14.79□□□□□ -0.04
SCN1B-205ENST00000602150 HECW2Q9P2P5 1572 aa14.79□□□□□ -0.04
SCN1B-205ENST00000602150 CC2D1BQ5T0F9 858 aaKnown RBP14.79□□□□□ -0.04
SCN1B-205ENST00000602150 NOP58Q9Y2X3 529 aaKnown RBP14.79□□□□□ -0.04
SCN1B-205ENST00000602150 CEP152O94986 1710 aa14.78□□□□□ -0.04
SCN1B-205ENST00000602150 PRDM15P57071 1507 aaPredicted RBP14.78□□□□□ -0.04
SCN1B-205ENST00000602150 NPATQ14207 1427 aa14.78□□□□□ -0.04
SCN1B-205ENST00000602150 NEO1Q92859 1461 aa14.78□□□□□ -0.04
SCN1B-205ENST00000602150 PRAG1Q86YV5 1406 aa14.78□□□□□ -0.04
SCN1B-205ENST00000602150 FRMPD1Q5SYB0 1578 aa14.78□□□□□ -0.04
SCN1B-205ENST00000602150 MRS2Q9HD23 443 aa14.78□□□□□ -0.04
SCN1B-205ENST00000602150 SALL2Q9Y467 1007 aaPredicted RBP14.77□□□□□ -0.04
SCN1B-205ENST00000602150 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
SCN1B-205ENST00000602150 MLH3Q9UHC1 1453 aa14.75□□□□□ -0.05
SCN1B-205ENST00000602150 NOS1P29475 1434 aa14.75□□□□□ -0.05
SCN1B-205ENST00000602150 CLTCL1P53675 1640 aa14.74□□□□□ -0.05
SCN1B-205ENST00000602150 B4GALNT3Q6L9W6 998 aa14.74□□□□□ -0.05
SCN1B-205ENST00000602150 ANO8Q9HCE9 1232 aaPredicted RBP14.74□□□□□ -0.05
SCN1B-205ENST00000602150 MAGI2Q86UL8 1455 aa14.73□□□□□ -0.05
SCN1B-205ENST00000602150 DISP3Q9P2K9 1392 aa14.73□□□□□ -0.05
SCN1B-205ENST00000602150 MAP3K4Q9Y6R4 1608 aa14.73□□□□□ -0.05
SCN1B-205ENST00000602150 SPATA31E1Q6ZUB1 1445 aa14.73□□□□□ -0.05
SCN1B-205ENST00000602150 DIP2CQ9Y2E4 1556 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms