RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 TERF2IPQ9NYB0 399 aa14.37□□□□□ -0.11
ZNF558-207ENST00000601372 KIF14Q15058 1648 aa14.37□□□□□ -0.11
ZNF558-207ENST00000601372 MINK1Q8N4C8 1332 aaPredicted RBP14.36□□□□□ -0.11
ZNF558-207ENST00000601372 ARHGEF11O15085 1522 aa14.36□□□□□ -0.11
ZNF558-207ENST00000601372 EVA1CP58658 441 aa14.36□□□□□ -0.11
ZNF558-207ENST00000601372 LTV1Q96GA3 475 aaPredicted RBP14.36□□□□□ -0.11
ZNF558-207ENST00000601372 RGS3P49796 1198 aa14.35□□□□□ -0.11
ZNF558-207ENST00000601372 WDR62O43379 1518 aa14.35□□□□□ -0.11
ZNF558-207ENST00000601372 RTF1Q92541 710 aaKnown RBP14.35□□□□□ -0.11
ZNF558-207ENST00000601372 TXNDC2Q86VQ3 553 aa14.34□□□□□ -0.11
ZNF558-207ENST00000601372 EPRSP07814 1512 aaKnown RBP14.34□□□□□ -0.11
ZNF558-207ENST00000601372 ANKRD50Q9ULJ7 1429 aa14.34□□□□□ -0.11
ZNF558-207ENST00000601372 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
ZNF558-207ENST00000601372 DDRGK1Q96HY6 314 aa14.33□□□□□ -0.11
ZNF558-207ENST00000601372 AMPHP49418 695 aa14.33□□□□□ -0.12
ZNF558-207ENST00000601372 PSME1Q06323 249 aa14.33□□□□□ -0.12
ZNF558-207ENST00000601372 C9orf84Q5VXU9 1444 aa14.33□□□□□ -0.12
ZNF558-207ENST00000601372 FRAT1Q92837 279 aaPredicted RBP14.32□□□□□ -0.12
ZNF558-207ENST00000601372 PCF11O94913 1555 aaKnown RBP14.31□□□□□ -0.12
ZNF558-207ENST00000601372 THEMISQ8N1K5 641 aaPredicted RBP14.3□□□□□ -0.12
ZNF558-207ENST00000601372 ZNF330Q9Y3S2 320 aaPredicted RBP14.3□□□□□ -0.12
ZNF558-207ENST00000601372 ADGRL1O94910 1474 aa14.29□□□□□ -0.12
ZNF558-207ENST00000601372 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
ZNF558-207ENST00000601372 RTN4Q9NQC3 1192 aaKnown RBP14.29□□□□□ -0.12
ZNF558-207ENST00000601372 CTTNBP2Q8WZ74 1663 aa14.28□□□□□ -0.12
ZNF558-207ENST00000601372 KTN1Q86UP2 1357 aaKnown RBP14.28□□□□□ -0.12
ZNF558-207ENST00000601372 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
ZNF558-207ENST00000601372 PROSER2Q86WR7 435 aaPredicted RBP14.28□□□□□ -0.12
ZNF558-207ENST00000601372 EVC2Q86UK5 1308 aa14.28□□□□□ -0.12
ZNF558-207ENST00000601372 ADAMTS12P58397 1594 aa14.27□□□□□ -0.13
ZNF558-207ENST00000601372 FTSJ3Q8IY81 847 aaKnown RBP14.26□□□□□ -0.13
ZNF558-207ENST00000601372 TIAM1Q13009 1591 aa14.26□□□□□ -0.13
ZNF558-207ENST00000601372 RRBP1Q9P2E9 1410 aaKnown RBP14.25□□□□□ -0.13
ZNF558-207ENST00000601372 ANKLE2Q86XL3 938 aa14.25□□□□□ -0.13
ZNF558-207ENST00000601372 U2AF1L5P0DN76 240 aaPredicted RBP14.24□□□□□ -0.13
ZNF558-207ENST00000601372 U2AF1Q01081 240 aaKnown RBP eCLIP14.24□□□□□ -0.13
ZNF558-207ENST00000601372 ASXL2Q76L83 1435 aa14.24□□□□□ -0.13
ZNF558-207ENST00000601372 RCAN3Q9UKA8 241 aa14.23□□□□□ -0.13
ZNF558-207ENST00000601372 TMEM132EQ6IEE7 984 aa14.23□□□□□ -0.13
ZNF558-207ENST00000601372 RAPGEF6Q8TEU7 1601 aa14.23□□□□□ -0.13
ZNF558-207ENST00000601372 DEKP35659 375 aaKnown RBP14.23□□□□□ -0.13
ZNF558-207ENST00000601372 FANCAO15360 1455 aa14.22□□□□□ -0.13
ZNF558-207ENST00000601372 BECN1Q14457 450 aa14.22□□□□□ -0.13
ZNF558-207ENST00000601372 COG3Q96JB2 828 aa14.22□□□□□ -0.13
ZNF558-207ENST00000601372 DENND4BO75064 1496 aaPredicted RBP14.21□□□□□ -0.14
ZNF558-207ENST00000601372 ST20-MTHFSA0A0A6YYL1 179 aa14.21□□□□□ -0.14
ZNF558-207ENST00000601372 ANP32BQ92688 251 aaKnown RBP14.2□□□□□ -0.14
ZNF558-207ENST00000601372 ESCO1Q5FWF5 840 aa14.2□□□□□ -0.14
ZNF558-207ENST00000601372 CCDC146Q8IYE0 955 aa14.2□□□□□ -0.14
ZNF558-207ENST00000601372 TEX14Q8IWB6 1497 aa14.2□□□□□ -0.14
ZNF558-207ENST00000601372 MIA2Q96PC5 1412 aa14.19□□□□□ -0.14
ZNF558-207ENST00000601372 DAPK1P53355 1430 aa14.19□□□□□ -0.14
ZNF558-207ENST00000601372 RALBP1Q15311 655 aa14.19□□□□□ -0.14
ZNF558-207ENST00000601372 PRKRIP1Q9H875 184 aaPredicted RBP14.19□□□□□ -0.14
ZNF558-207ENST00000601372 CEBPAP49715 358 aaPredicted RBP14.19□□□□□ -0.14
ZNF558-207ENST00000601372 NUTM2GQ5VZR2 741 aa14.19□□□□□ -0.14
ZNF558-207ENST00000601372 CAMSAP2Q08AD1 1489 aa14.19□□□□□ -0.14
ZNF558-207ENST00000601372 AKNAQ7Z591 1439 aa14.18□□□□□ -0.14
ZNF558-207ENST00000601372 CCDC141Q6ZP82 1450 aa14.18□□□□□ -0.14
ZNF558-207ENST00000601372 SPRYD3Q8NCJ5 442 aa14.17□□□□□ -0.14
ZNF558-207ENST00000601372 NUTM2BA6NNL0 878 aaPredicted RBP14.17□□□□□ -0.14
ZNF558-207ENST00000601372 NUTM2EB1AL46 878 aaPredicted RBP14.17□□□□□ -0.14
ZNF558-207ENST00000601372 OS9Q13438 667 aaPredicted RBP14.17□□□□□ -0.14
ZNF558-207ENST00000601372 NUTM2AQ8IVF1 878 aaPredicted RBP14.17□□□□□ -0.14
ZNF558-207ENST00000601372 SLC26A8Q96RN1 970 aa14.17□□□□□ -0.14
ZNF558-207ENST00000601372 WDR97A6NE52 1622 aa14.17□□□□□ -0.14
ZNF558-207ENST00000601372 GOLGA2Q08379 1002 aa14.16□□□□□ -0.14
ZNF558-207ENST00000601372 USP47Q96K76 1375 aa14.16□□□□□ -0.14
ZNF558-207ENST00000601372 MSH5O43196 834 aa14.15□□□□□ -0.14
ZNF558-207ENST00000601372 PLIN1O60240 522 aa14.15□□□□□ -0.14
ZNF558-207ENST00000601372 CABP2Q9NPB3 220 aa14.14□□□□□ -0.15
ZNF558-207ENST00000601372 ERICH6BQ5W0A0 696 aa14.14□□□□□ -0.15
ZNF558-207ENST00000601372 SYTL4Q96C24 671 aaPredicted RBP14.14□□□□□ -0.15
ZNF558-207ENST00000601372 PANK3Q9H999 370 aa14.14□□□□□ -0.15
ZNF558-207ENST00000601372 PTPN23Q9H3S7 1636 aa14.14□□□□□ -0.15
ZNF558-207ENST00000601372 WDR7Q9Y4E6 1490 aa14.14□□□□□ -0.15
ZNF558-207ENST00000601372 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
ZNF558-207ENST00000601372 WASHC2AQ641Q2 1341 aa14.13□□□□□ -0.15
ZNF558-207ENST00000601372 SLC52A1Q9NWF4 448 aa14.13□□□□□ -0.15
ZNF558-207ENST00000601372 CENPJQ9HC77 1338 aaPredicted RBP14.13□□□□□ -0.15
ZNF558-207ENST00000601372 KIAA0556O60303 1618 aa14.13□□□□□ -0.15
ZNF558-207ENST00000601372 CGNL1Q0VF96 1302 aa14.12□□□□□ -0.15
ZNF558-207ENST00000601372 C1orf141Q5JVX7 400 aa14.12□□□□□ -0.15
ZNF558-207ENST00000601372 TPRNQ4KMQ1 711 aa14.12□□□□□ -0.15
ZNF558-207ENST00000601372 PMFBP1Q8TBY8 1022 aa14.12□□□□□ -0.15
ZNF558-207ENST00000601372 TMX4Q9H1E5 349 aaPredicted RBP14.11□□□□□ -0.15
ZNF558-207ENST00000601372 ERBINQ96RT1 1412 aa14.11□□□□□ -0.15
ZNF558-207ENST00000601372 MYBBP1AQ9BQG0 1328 aaKnown RBP14.11□□□□□ -0.15
ZNF558-207ENST00000601372 PRAM1Q96QH2 718 aa14.11□□□□□ -0.15
ZNF558-207ENST00000601372 CFAP70Q5T0N1 1121 aa14.11□□□□□ -0.15
ZNF558-207ENST00000601372 GPRASP1Q5JY77 1395 aa14.1□□□□□ -0.15
ZNF558-207ENST00000601372 KIF7Q2M1P5 1343 aa14.1□□□□□ -0.15
ZNF558-207ENST00000601372 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
ZNF558-207ENST00000601372 ZBED9Q6R2W3 1325 aa14.1□□□□□ -0.15
ZNF558-207ENST00000601372 ATP10BO94823 1461 aa14.09□□□□□ -0.15
ZNF558-207ENST00000601372 CALD1Q05682 793 aaKnown RBP14.09□□□□□ -0.15
ZNF558-207ENST00000601372 NCLP19338 710 aaKnown RBP14.09□□□□□ -0.15
ZNF558-207ENST00000601372 EXOC6Q8TAG9 804 aa14.09□□□□□ -0.15
ZNF558-207ENST00000601372 CNTLNQ9NXG0 1405 aa14.09□□□□□ -0.15
ZNF558-207ENST00000601372 FBXO31Q5XUX0 539 aaPredicted RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms