RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 PSDA5PKW4 1024 aaPredicted RBP9.21□□□□□ -0.94
VRK3-222ENST00000601324 FCHSD2O94868 740 aa9.21□□□□□ -0.94
VRK3-222ENST00000601324 ZDHHC16Q969W1 377 aa9.21□□□□□ -0.94
VRK3-222ENST00000601324 RBM33Q96EV2 1170 aaKnown RBP9.21□□□□□ -0.94
VRK3-222ENST00000601324 PTGDRQ13258 359 aa9.19□□□□□ -0.94
VRK3-222ENST00000601324 HIC1Q14526 733 aa9.18□□□□□ -0.94
VRK3-222ENST00000601324 PPP4R3BQ5MIZ7 849 aa9.18□□□□□ -0.94
VRK3-222ENST00000601324 CDHR5Q9HBB8 845 aa9.18□□□□□ -0.94
VRK3-222ENST00000601324 SLC24A3Q9HC58 644 aa9.18□□□□□ -0.94
VRK3-222ENST00000601324 DCAF1Q9Y4B6 1507 aa9.18□□□□□ -0.94
VRK3-222ENST00000601324 GNPATO15228 680 aa9.17□□□□□ -0.94
VRK3-222ENST00000601324 TSR1Q2NL82 804 aaKnown RBP9.17□□□□□ -0.94
VRK3-222ENST00000601324 ADAM33Q9BZ11 813 aa9.17□□□□□ -0.94
VRK3-222ENST00000601324 KRI1Q8N9T8 703 aaKnown RBP9.16□□□□□ -0.94
VRK3-222ENST00000601324 C6orf132Q5T0Z8 1188 aa9.15□□□□□ -0.94
VRK3-222ENST00000601324 NPDC1Q9NQX5 325 aaPredicted RBP9.15□□□□□ -0.94
VRK3-222ENST00000601324 ST18O60284 1047 aa9.14□□□□□ -0.95
VRK3-222ENST00000601324 MAP2K5Q13163 448 aa9.14□□□□□ -0.95
VRK3-222ENST00000601324 CERKQ8TCT0 537 aa9.14□□□□□ -0.95
VRK3-222ENST00000601324 AK7Q96M32 723 aa9.14□□□□□ -0.95
VRK3-222ENST00000601324 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
VRK3-222ENST00000601324 BCL2L12Q9HB09 334 aa9.13□□□□□ -0.95
VRK3-222ENST00000601324 ZCCHC6Q5VYS8 1495 aaKnown RBP9.13□□□□□ -0.95
VRK3-222ENST00000601324 SCRIBQ14160 1630 aa9.13□□□□□ -0.95
VRK3-222ENST00000601324 FECHP22830 423 aa9.11□□□□□ -0.95
VRK3-222ENST00000601324 ERBB3P21860 1342 aa9.09□□□□□ -0.95
VRK3-222ENST00000601324 IRF6O14896 467 aa9.09□□□□□ -0.95
VRK3-222ENST00000601324 PTPREP23469 700 aa9.09□□□□□ -0.95
VRK3-222ENST00000601324 EMP3P54852 163 aa9.09□□□□□ -0.95
VRK3-222ENST00000601324 RBM27Q9P2N5 1060 aaKnown RBP9.09□□□□□ -0.95
VRK3-222ENST00000601324 CCDC102AQ96A19 550 aa9.08□□□□□ -0.96
VRK3-222ENST00000601324 FAM163AQ96GL9 167 aaPredicted RBP9.08□□□□□ -0.96
VRK3-222ENST00000601324 TRIM66O15016 1216 aa9.07□□□□□ -0.96
VRK3-222ENST00000601324 VARS2Q5ST30 1063 aaKnown RBP9.07□□□□□ -0.96
VRK3-222ENST00000601324 MARVELD3Q96A59 401 aa9.07□□□□□ -0.96
VRK3-222ENST00000601324 PPP1R3GB7ZBB8 358 aa9.06□□□□□ -0.96
VRK3-222ENST00000601324 COL9A1P20849 921 aa9.06□□□□□ -0.96
VRK3-222ENST00000601324 BRPF1P55201 1214 aaPredicted RBP9.06□□□□□ -0.96
VRK3-222ENST00000601324 PRSS12P56730 875 aa9.06□□□□□ -0.96
VRK3-222ENST00000601324 PADI6Q6TGC4 694 aa9.06□□□□□ -0.96
VRK3-222ENST00000601324 NEUROD2Q15784 382 aa9.04□□□□□ -0.96
VRK3-222ENST00000601324 TTC13Q8NBP0 860 aa9.04□□□□□ -0.96
VRK3-222ENST00000601324 CDCA7LQ96GN5 454 aa9.04□□□□□ -0.96
VRK3-222ENST00000601324 KCNH8Q96L42 1107 aa9.04□□□□□ -0.96
VRK3-222ENST00000601324 KCNK17Q96T54 332 aa9.04□□□□□ -0.96
VRK3-222ENST00000601324 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
VRK3-222ENST00000601324 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
VRK3-222ENST00000601324 PDE4DQ08499 809 aa9.02□□□□□ -0.97
VRK3-222ENST00000601324 AMHR2Q16671 573 aa9.02□□□□□ -0.97
VRK3-222ENST00000601324 ADGRG1Q9Y653 693 aa9.01□□□□□ -0.97
VRK3-222ENST00000601324 ARHGAP33O14559 1287 aa9□□□□□ -0.97
VRK3-222ENST00000601324 OATP04181 439 aa9□□□□□ -0.97
VRK3-222ENST00000601324 PBX2P40425 430 aa9□□□□□ -0.97
VRK3-222ENST00000601324 ZNF687Q8N1G0 1237 aa9□□□□□ -0.97
VRK3-222ENST00000601324 TRIM6-TRIM34B2RNG4 842 aa8.99□□□□□ -0.97
VRK3-222ENST00000601324 PSEN2P49810 448 aa8.99□□□□□ -0.97
VRK3-222ENST00000601324 POTEEQ6S8J3 1075 aa8.99□□□□□ -0.97
VRK3-222ENST00000601324 HS3ST6Q96QI5 342 aa8.99□□□□□ -0.97
VRK3-222ENST00000601324 FAM198AQ9UFP1 575 aa8.99□□□□□ -0.97
VRK3-222ENST00000601324 TSKSQ9UJT2 592 aa8.99□□□□□ -0.97
VRK3-222ENST00000601324 ERCC6Q03468 1493 aa8.99□□□□□ -0.97
VRK3-222ENST00000601324 POTEB3A0JP26 581 aa8.98□□□□□ -0.97
VRK3-222ENST00000601324 FAM161AQ3B820 660 aa8.98□□□□□ -0.97
VRK3-222ENST00000601324 POTEBQ6S5H4 581 aa8.98□□□□□ -0.97
VRK3-222ENST00000601324 METTL3Q86U44 580 aaKnown RBP8.98□□□□□ -0.97
VRK3-222ENST00000601324 ZBED2Q9BTP6 218 aa8.98□□□□□ -0.97
VRK3-222ENST00000601324 NCAPD3P42695 1498 aa8.97□□□□□ -0.97
VRK3-222ENST00000601324 ONECUT3O60422 494 aaPredicted RBP8.97□□□□□ -0.97
VRK3-222ENST00000601324 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
VRK3-222ENST00000601324 NBPF26B4DH59 902 aa8.96□□□□□ -0.98
VRK3-222ENST00000601324 PROX2Q3B8N5 592 aa8.96□□□□□ -0.98
VRK3-222ENST00000601324 PACS2Q86VP3 889 aa8.96□□□□□ -0.98
VRK3-222ENST00000601324 RBM46Q8TBY0 533 aaKnown RBP8.96□□□□□ -0.98
VRK3-222ENST00000601324 PXYLP1Q8TE99 480 aa8.96□□□□□ -0.98
VRK3-222ENST00000601324 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
VRK3-222ENST00000601324 KDM4CQ9H3R0 1056 aa8.96□□□□□ -0.98
VRK3-222ENST00000601324 GPBP1L1Q9HC44 474 aaPredicted RBP8.96□□□□□ -0.98
VRK3-222ENST00000601324 TTLL12Q14166 644 aaPredicted RBP8.95□□□□□ -0.98
VRK3-222ENST00000601324 DMRTA1Q5VZB9 504 aa8.95□□□□□ -0.98
VRK3-222ENST00000601324 PARP9Q8IXQ6 854 aa8.95□□□□□ -0.98
VRK3-222ENST00000601324 SLC4A5Q9BY07 1137 aa8.95□□□□□ -0.98
VRK3-222ENST00000601324 CLCN1P35523 988 aa8.93□□□□□ -0.98
VRK3-222ENST00000601324 NUDT18Q6ZVK8 323 aa8.93□□□□□ -0.98
VRK3-222ENST00000601324 TATDN2Q93075 761 aa8.93□□□□□ -0.98
VRK3-222ENST00000601324 EYA1Q99502 592 aa8.93□□□□□ -0.98
VRK3-222ENST00000601324 MDM2Q00987 491 aaPredicted RBP8.92□□□□□ -0.98
VRK3-222ENST00000601324 TMEM132AQ24JP5 1023 aa8.92□□□□□ -0.98
VRK3-222ENST00000601324 TMUB1Q9BVT8 246 aa8.92□□□□□ -0.98
VRK3-222ENST00000601324 GPCPD1Q9NPB8 672 aa8.92□□□□□ -0.98
VRK3-222ENST00000601324 KIAA1468Q9P260 1216 aa8.92□□□□□ -0.98
VRK3-222ENST00000601324 PNMA3Q9UL41 463 aa8.92□□□□□ -0.98
VRK3-222ENST00000601324 NESP48681 1621 aa8.91□□□□□ -0.98
VRK3-222ENST00000601324 THOC2Q8NI27 1593 aaKnown RBP8.91□□□□□ -0.98
VRK3-222ENST00000601324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.91□□□□□ -0.98
VRK3-222ENST00000601324 C3orf80F5H4A9 247 aa8.91□□□□□ -0.98
VRK3-222ENST00000601324 GIGYF2Q6Y7W6 1299 aaKnown RBP8.91□□□□□ -0.98
VRK3-222ENST00000601324 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
VRK3-222ENST00000601324 REPIN1Q9BWE0 567 aaKnown RBP8.9□□□□□ -0.98
VRK3-222ENST00000601324 VPS9D1Q9Y2B5 631 aa8.9□□□□□ -0.98
VRK3-222ENST00000601324 RCCD1A6NED2 376 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms