RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ADCY10Q96PN6 1610 aa15.62■□□□□ 0.09
ARHGEF1-220ENST00000600274 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
ARHGEF1-220ENST00000600274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.6■□□□□ 0.09
ARHGEF1-220ENST00000600274 TRAPPC8Q9Y2L5 1435 aa15.6■□□□□ 0.09
ARHGEF1-220ENST00000600274 FAM135AQ9P2D6 1515 aa15.6■□□□□ 0.09
ARHGEF1-220ENST00000600274 SHANK2Q9UPX8 1470 aa15.59■□□□□ 0.09
ARHGEF1-220ENST00000600274 GGT6Q6P531 493 aa15.57■□□□□ 0.08
ARHGEF1-220ENST00000600274 ABCC2Q92887 1545 aa15.57■□□□□ 0.08
ARHGEF1-220ENST00000600274 CROCC2H7BZ55 1655 aa15.57■□□□□ 0.08
ARHGEF1-220ENST00000600274 ARHGEF12Q9NZN5 1544 aa15.56■□□□□ 0.08
ARHGEF1-220ENST00000600274 CDC42BPBQ9Y5S2 1711 aa15.56■□□□□ 0.08
ARHGEF1-220ENST00000600274 RBM19Q9Y4C8 960 aaKnown RBP15.56■□□□□ 0.08
ARHGEF1-220ENST00000600274 ZBED9Q6R2W3 1325 aa15.55■□□□□ 0.08
ARHGEF1-220ENST00000600274 PANK3Q9H999 370 aa15.55■□□□□ 0.08
ARHGEF1-220ENST00000600274 DHX29Q7Z478 1369 aaKnown RBP15.55■□□□□ 0.08
ARHGEF1-220ENST00000600274 SCAPERQ9BY12 1400 aa15.55■□□□□ 0.08
ARHGEF1-220ENST00000600274 NUTM2DQ5VT03 806 aaPredicted RBP15.53■□□□□ 0.08
ARHGEF1-220ENST00000600274 PLCH2O75038 1416 aa15.53■□□□□ 0.08
ARHGEF1-220ENST00000600274 BCORL1Q5H9F3 1711 aa15.53■□□□□ 0.08
ARHGEF1-220ENST00000600274 TMF1P82094 1093 aa15.52■□□□□ 0.07
ARHGEF1-220ENST00000600274 PREX2Q70Z35 1606 aa15.52■□□□□ 0.07
ARHGEF1-220ENST00000600274 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.07
ARHGEF1-220ENST00000600274 PNISRQ8TF01 805 aaKnown RBP15.51■□□□□ 0.07
ARHGEF1-220ENST00000600274 PLA2R1Q13018 1463 aa15.5■□□□□ 0.07
ARHGEF1-220ENST00000600274 ARHGEF5Q12774 1597 aa15.5■□□□□ 0.07
ARHGEF1-220ENST00000600274 DISP3Q9P2K9 1392 aa15.49■□□□□ 0.07
ARHGEF1-220ENST00000600274 KTN1Q86UP2 1357 aaKnown RBP15.49■□□□□ 0.07
ARHGEF1-220ENST00000600274 PRAG1Q86YV5 1406 aa15.48■□□□□ 0.07
ARHGEF1-220ENST00000600274 MYBBP1AQ9BQG0 1328 aaKnown RBP15.48■□□□□ 0.07
ARHGEF1-220ENST00000600274 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
ARHGEF1-220ENST00000600274 PPP4R2Q9NY27 417 aa15.48■□□□□ 0.07
ARHGEF1-220ENST00000600274 A2MP01023 1474 aa15.47■□□□□ 0.07
ARHGEF1-220ENST00000600274 UHRF1BP1Q6BDS2 1440 aa15.47■□□□□ 0.07
ARHGEF1-220ENST00000600274 CFAP70Q5T0N1 1121 aa15.46■□□□□ 0.07
ARHGEF1-220ENST00000600274 KDM5CP41229 1560 aa15.46■□□□□ 0.07
ARHGEF1-220ENST00000600274 KANK1Q14678 1352 aa15.46■□□□□ 0.07
ARHGEF1-220ENST00000600274 NUDCQ9Y266 331 aa15.46■□□□□ 0.07
ARHGEF1-220ENST00000600274 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
ARHGEF1-220ENST00000600274 RALBP1Q15311 655 aa15.46■□□□□ 0.06
ARHGEF1-220ENST00000600274 CCDC136Q96JN2 1154 aa15.45■□□□□ 0.06
ARHGEF1-220ENST00000600274 ZCCHC11Q5TAX3 1644 aaKnown RBP15.45■□□□□ 0.06
ARHGEF1-220ENST00000600274 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
ARHGEF1-220ENST00000600274 NLRP13Q86W25 1043 aa15.45■□□□□ 0.06
ARHGEF1-220ENST00000600274 MYO5CQ9NQX4 1742 aa15.44■□□□□ 0.06
ARHGEF1-220ENST00000600274 ARID4BQ4LE39 1312 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF1-220ENST00000600274 FANCAO15360 1455 aa15.44■□□□□ 0.06
ARHGEF1-220ENST00000600274 RAPGEF3O95398 923 aa15.44■□□□□ 0.06
ARHGEF1-220ENST00000600274 TNNT2P45379 298 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF1-220ENST00000600274 TESK2Q96S53 571 aa15.44■□□□□ 0.06
ARHGEF1-220ENST00000600274 SAFB2Q14151 953 aaKnown RBP eCLIP15.43■□□□□ 0.06
ARHGEF1-220ENST00000600274 CDCA7LQ96GN5 454 aa15.42■□□□□ 0.06
ARHGEF1-220ENST00000600274 DUOX2Q9NRD8 1548 aa15.42■□□□□ 0.06
ARHGEF1-220ENST00000600274 ADGRL1O94910 1474 aa15.41■□□□□ 0.06
ARHGEF1-220ENST00000600274 CYB5RLQ6IPT4 315 aa15.41■□□□□ 0.06
ARHGEF1-220ENST00000600274 TRAK1Q9UPV9 953 aa15.4■□□□□ 0.06
ARHGEF1-220ENST00000600274 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
ARHGEF1-220ENST00000600274 ASXL2Q76L83 1435 aa15.4■□□□□ 0.06
ARHGEF1-220ENST00000600274 ERBINQ96RT1 1412 aa15.4■□□□□ 0.06
ARHGEF1-220ENST00000600274 KDM5DQ9BY66 1539 aa15.4■□□□□ 0.06
ARHGEF1-220ENST00000600274 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
ARHGEF1-220ENST00000600274 NBR1Q14596 966 aa15.39■□□□□ 0.05
ARHGEF1-220ENST00000600274 WDR43Q15061 677 aaKnown RBP eCLIP15.39■□□□□ 0.05
ARHGEF1-220ENST00000600274 TMEM132EQ6IEE7 984 aa15.39■□□□□ 0.05
ARHGEF1-220ENST00000600274 PLIN1O60240 522 aa15.38■□□□□ 0.05
ARHGEF1-220ENST00000600274 ADGRF5Q8IZF2 1346 aa15.38■□□□□ 0.05
ARHGEF1-220ENST00000600274 WASHC2CQ9Y4E1 1318 aa15.38■□□□□ 0.05
ARHGEF1-220ENST00000600274 PER1O15534 1290 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF1-220ENST00000600274 CCDC146Q8IYE0 955 aa15.37■□□□□ 0.05
ARHGEF1-220ENST00000600274 ABCC1P33527 1531 aa15.36■□□□□ 0.05
ARHGEF1-220ENST00000600274 BRD4O60885 1362 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF1-220ENST00000600274 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
ARHGEF1-220ENST00000600274 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
ARHGEF1-220ENST00000600274 STK26Q9P289 416 aa15.34■□□□□ 0.05
ARHGEF1-220ENST00000600274 RCAN3Q9UKA8 241 aa15.33■□□□□ 0.05
ARHGEF1-220ENST00000600274 UGGT1Q9NYU2 1555 aa15.33■□□□□ 0.04
ARHGEF1-220ENST00000600274 MAST1Q9Y2H9 1570 aa15.32■□□□□ 0.04
ARHGEF1-220ENST00000600274 CFAP65Q6ZU64 1925 aaKnown RBP15.32■□□□□ 0.04
ARHGEF1-220ENST00000600274 MLECQ14165 292 aa15.32■□□□□ 0.04
ARHGEF1-220ENST00000600274 NEUROD2Q15784 382 aa15.32■□□□□ 0.04
ARHGEF1-220ENST00000600274 EXOC6Q8TAG9 804 aa15.32■□□□□ 0.04
ARHGEF1-220ENST00000600274 UHRF1BP1LA0JNW5 1464 aa15.31■□□□□ 0.04
ARHGEF1-220ENST00000600274 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
ARHGEF1-220ENST00000600274 CDCA8Q53HL2 280 aa15.31■□□□□ 0.04
ARHGEF1-220ENST00000600274 SMG6Q86US8 1419 aaKnown RBP15.3■□□□□ 0.04
ARHGEF1-220ENST00000600274 ATP10AO60312 1499 aa15.3■□□□□ 0.04
ARHGEF1-220ENST00000600274 UNC13BO14795 1591 aa15.3■□□□□ 0.04
ARHGEF1-220ENST00000600274 PPP2R1AP30153 589 aa15.29■□□□□ 0.04
ARHGEF1-220ENST00000600274 ATP7AQ04656 1500 aa15.28■□□□□ 0.04
ARHGEF1-220ENST00000600274 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
ARHGEF1-220ENST00000600274 COL17A1Q9UMD9 1497 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF1-220ENST00000600274 GPRASP1Q5JY77 1395 aa15.28■□□□□ 0.04
ARHGEF1-220ENST00000600274 NPM2Q86SE8 214 aaKnown RBP15.28■□□□□ 0.04
ARHGEF1-220ENST00000600274 IQGAP3Q86VI3 1631 aa15.28■□□□□ 0.04
ARHGEF1-220ENST00000600274 PARD3Q8TEW0 1356 aa15.28■□□□□ 0.04
ARHGEF1-220ENST00000600274 TRPM1Q7Z4N2 1603 aa15.28■□□□□ 0.04
ARHGEF1-220ENST00000600274 ZFYVE16Q7Z3T8 1539 aa15.28■□□□□ 0.04
ARHGEF1-220ENST00000600274 PLPPR3Q6T4P5 718 aa15.27■□□□□ 0.04
ARHGEF1-220ENST00000600274 STAG3Q9UJ98 1225 aa15.27■□□□□ 0.04
ARHGEF1-220ENST00000600274 RRP1P56182 461 aaKnown RBP15.27■□□□□ 0.04
ARHGEF1-220ENST00000600274 RTN4Q9NQC3 1192 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms