RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 PLXNC1O60486 1568 aa14.68□□□□□ -0.06
ZNF544-215ENST00000599953 KTN1Q86UP2 1357 aaKnown RBP14.68□□□□□ -0.06
ZNF544-215ENST00000599953 MYO5CQ9NQX4 1742 aa14.68□□□□□ -0.06
ZNF544-215ENST00000599953 KDM2AQ9Y2K7 1162 aa14.67□□□□□ -0.06
ZNF544-215ENST00000599953 PPP4R2Q9NY27 417 aa14.67□□□□□ -0.06
ZNF544-215ENST00000599953 RBM19Q9Y4C8 960 aaKnown RBP14.65□□□□□ -0.06
ZNF544-215ENST00000599953 IRX6P78412 446 aaPredicted RBP14.64□□□□□ -0.07
ZNF544-215ENST00000599953 ST20-MTHFSA0A0A6YYL1 179 aa14.64□□□□□ -0.07
ZNF544-215ENST00000599953 IQGAP3Q86VI3 1631 aa14.64□□□□□ -0.07
ZNF544-215ENST00000599953 DUOX2Q9NRD8 1548 aa14.64□□□□□ -0.07
ZNF544-215ENST00000599953 PRAG1Q86YV5 1406 aa14.64□□□□□ -0.07
ZNF544-215ENST00000599953 SMG6Q86US8 1419 aaKnown RBP14.63□□□□□ -0.07
ZNF544-215ENST00000599953 ERBINQ96RT1 1412 aa14.63□□□□□ -0.07
ZNF544-215ENST00000599953 TRPM1Q7Z4N2 1603 aa14.63□□□□□ -0.07
ZNF544-215ENST00000599953 RALBP1Q15311 655 aa14.62□□□□□ -0.07
ZNF544-215ENST00000599953 TMC1Q8TDI8 760 aa14.62□□□□□ -0.07
ZNF544-215ENST00000599953 LAMC1P11047 1609 aa14.6□□□□□ -0.07
ZNF544-215ENST00000599953 EIF2AK4Q9P2K8 1649 aaKnown RBP14.6□□□□□ -0.07
ZNF544-215ENST00000599953 E9PCH4 1651 aa14.6□□□□□ -0.07
ZNF544-215ENST00000599953 PLCH2O75038 1416 aa14.6□□□□□ -0.07
ZNF544-215ENST00000599953 BRD4O60885 1362 aaPredicted RBP14.6□□□□□ -0.07
ZNF544-215ENST00000599953 GPRASP1Q5JY77 1395 aa14.6□□□□□ -0.07
ZNF544-215ENST00000599953 UHRF1BP1LA0JNW5 1464 aa14.6□□□□□ -0.07
ZNF544-215ENST00000599953 MAGI2Q86UL8 1455 aa14.6□□□□□ -0.07
ZNF544-215ENST00000599953 MYBBP1AQ9BQG0 1328 aaKnown RBP14.59□□□□□ -0.07
ZNF544-215ENST00000599953 ATP10AO60312 1499 aa14.59□□□□□ -0.07
ZNF544-215ENST00000599953 EFCAB2Q5VUJ9 269 aa14.59□□□□□ -0.07
ZNF544-215ENST00000599953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.59□□□□□ -0.07
ZNF544-215ENST00000599953 ANP32EQ9BTT0 268 aa14.59□□□□□ -0.07
ZNF544-215ENST00000599953 NUDCQ9Y266 331 aa14.59□□□□□ -0.07
ZNF544-215ENST00000599953 PNISRQ8TF01 805 aaKnown RBP14.58□□□□□ -0.08
ZNF544-215ENST00000599953 PLA2R1Q13018 1463 aa14.58□□□□□ -0.08
ZNF544-215ENST00000599953 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.08
ZNF544-215ENST00000599953 ERCC6L2Q5T890 1561 aa14.58□□□□□ -0.08
ZNF544-215ENST00000599953 A2MP01023 1474 aa14.57□□□□□ -0.08
ZNF544-215ENST00000599953 ZCCHC11Q5TAX3 1644 aaKnown RBP14.57□□□□□ -0.08
ZNF544-215ENST00000599953 RGL3Q3MIN7 710 aa14.55□□□□□ -0.08
ZNF544-215ENST00000599953 ABCC1P33527 1531 aa14.55□□□□□ -0.08
ZNF544-215ENST00000599953 PRDM15P57071 1507 aaPredicted RBP14.55□□□□□ -0.08
ZNF544-215ENST00000599953 CLASP1Q7Z460 1538 aa14.55□□□□□ -0.08
ZNF544-215ENST00000599953 LRPPRCP42704 1394 aaKnown RBP14.55□□□□□ -0.08
ZNF544-215ENST00000599953 ARAP3Q8WWN8 1544 aa14.53□□□□□ -0.08
ZNF544-215ENST00000599953 COL17A1Q9UMD9 1497 aaPredicted RBP14.53□□□□□ -0.08
ZNF544-215ENST00000599953 WASHC2CQ9Y4E1 1318 aa14.53□□□□□ -0.08
ZNF544-215ENST00000599953 NLRP13Q86W25 1043 aa14.52□□□□□ -0.08
ZNF544-215ENST00000599953 RNF123Q5XPI4 1314 aa14.52□□□□□ -0.09
ZNF544-215ENST00000599953 RTEL1-TNFRSF6BF6WH68 1400 aa14.52□□□□□ -0.09
ZNF544-215ENST00000599953 PARD3Q8TEW0 1356 aa14.51□□□□□ -0.09
ZNF544-215ENST00000599953 FANCIQ9NVI1 1328 aa14.51□□□□□ -0.09
ZNF544-215ENST00000599953 NBPF1Q3BBV0 1214 aa14.5□□□□□ -0.09
ZNF544-215ENST00000599953 TMF1P82094 1093 aa14.49□□□□□ -0.09
ZNF544-215ENST00000599953 B4GALNT3Q6L9W6 998 aa14.49□□□□□ -0.09
ZNF544-215ENST00000599953 STAC3Q96MF2 364 aa14.49□□□□□ -0.09
ZNF544-215ENST00000599953 TRAPPC8Q9Y2L5 1435 aa14.49□□□□□ -0.09
ZNF544-215ENST00000599953 SPAG9O60271 1321 aaKnown RBP14.49□□□□□ -0.09
ZNF544-215ENST00000599953 RNF17Q9BXT8 1623 aaKnown RBP14.48□□□□□ -0.09
ZNF544-215ENST00000599953 TESK2Q96S53 571 aa14.47□□□□□ -0.09
ZNF544-215ENST00000599953 INSRP06213 1382 aa14.46□□□□□ -0.09
ZNF544-215ENST00000599953 ZFYVE16Q7Z3T8 1539 aa14.46□□□□□ -0.09
ZNF544-215ENST00000599953 TRPM2O94759 1503 aa14.46□□□□□ -0.1
ZNF544-215ENST00000599953 PER1O15534 1290 aaPredicted RBP14.45□□□□□ -0.1
ZNF544-215ENST00000599953 PDE3BQ13370 1112 aa14.45□□□□□ -0.1
ZNF544-215ENST00000599953 DISP3Q9P2K9 1392 aa14.45□□□□□ -0.1
ZNF544-215ENST00000599953 ZMYM4Q5VZL5 1548 aa14.45□□□□□ -0.1
ZNF544-215ENST00000599953 KANK1Q14678 1352 aa14.44□□□□□ -0.1
ZNF544-215ENST00000599953 DEPDC5O75140 1603 aa14.43□□□□□ -0.1
ZNF544-215ENST00000599953 WDR7Q9Y4E6 1490 aa14.43□□□□□ -0.1
ZNF544-215ENST00000599953 CCDC136Q96JN2 1154 aa14.43□□□□□ -0.1
ZNF544-215ENST00000599953 MADDQ8WXG6 1647 aa14.42□□□□□ -0.1
ZNF544-215ENST00000599953 PTPRTO14522 1441 aa14.42□□□□□ -0.1
ZNF544-215ENST00000599953 CEP152O94986 1710 aa14.42□□□□□ -0.1
ZNF544-215ENST00000599953 SPHKAPQ2M3C7 1700 aa14.42□□□□□ -0.1
ZNF544-215ENST00000599953 CDCA8Q53HL2 280 aa14.41□□□□□ -0.1
ZNF544-215ENST00000599953 PANK3Q9H999 370 aa14.41□□□□□ -0.1
ZNF544-215ENST00000599953 TET3O43151 1660 aa14.41□□□□□ -0.1
ZNF544-215ENST00000599953 ATP7AQ04656 1500 aa14.4□□□□□ -0.1
ZNF544-215ENST00000599953 SCAPERQ9BY12 1400 aa14.4□□□□□ -0.1
ZNF544-215ENST00000599953 ABCA9Q8IUA7 1624 aa14.4□□□□□ -0.1
ZNF544-215ENST00000599953 FANCAO15360 1455 aa14.4□□□□□ -0.1
ZNF544-215ENST00000599953 AFAP1Q8N556 730 aa14.4□□□□□ -0.1
ZNF544-215ENST00000599953 IQGAP1P46940 1657 aa14.39□□□□□ -0.11
ZNF544-215ENST00000599953 INO80Q9ULG1 1556 aaPredicted RBP14.39□□□□□ -0.11
ZNF544-215ENST00000599953 CC2D1BQ5T0F9 858 aaKnown RBP14.39□□□□□ -0.11
ZNF544-215ENST00000599953 ERICH6Q7L0X2 663 aa14.39□□□□□ -0.11
ZNF544-215ENST00000599953 SCAF11Q99590 1463 aaKnown RBP14.38□□□□□ -0.11
ZNF544-215ENST00000599953 NEURL4Q96JN8 1562 aa14.38□□□□□ -0.11
ZNF544-215ENST00000599953 EIF3AQ14152 1382 aaKnown RBP14.38□□□□□ -0.11
ZNF544-215ENST00000599953 BLMP54132 1417 aaPredicted RBP14.38□□□□□ -0.11
ZNF544-215ENST00000599953 CLTCL1P53675 1640 aa14.37□□□□□ -0.11
ZNF544-215ENST00000599953 RRP1P56182 461 aaKnown RBP14.37□□□□□ -0.11
ZNF544-215ENST00000599953 RCAN3Q9UKA8 241 aa14.37□□□□□ -0.11
ZNF544-215ENST00000599953 VWDEQ8N2E2 1590 aa14.37□□□□□ -0.11
ZNF544-215ENST00000599953 SLC24A1O60721 1099 aa14.36□□□□□ -0.11
ZNF544-215ENST00000599953 SYNMO15061 1565 aa14.35□□□□□ -0.11
ZNF544-215ENST00000599953 ADGRL1O94910 1474 aa14.35□□□□□ -0.11
ZNF544-215ENST00000599953 MSH5O43196 834 aa14.35□□□□□ -0.11
ZNF544-215ENST00000599953 KNSTRNQ9Y448 316 aa14.35□□□□□ -0.11
ZNF544-215ENST00000599953 KIAA1210Q9ULL0 1709 aa14.35□□□□□ -0.11
ZNF544-215ENST00000599953 SENP3-EIF4A1A0A087X0R7 540 aa14.35□□□□□ -0.11
ZNF544-215ENST00000599953 MYT1LQ9UL68 1186 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms