RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 HAP1P54257 671 aaPredicted RBP15.45■□□□□ 0.06
LINC00343-208ENST00000599264 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
LINC00343-208ENST00000599264 ARHGEF1Q92888 912 aaKnown RBP15.44■□□□□ 0.06
LINC00343-208ENST00000599264 VPS9D1Q9Y2B5 631 aa15.43■□□□□ 0.06
LINC00343-208ENST00000599264 PPP1R3GB7ZBB8 358 aa15.42■□□□□ 0.06
LINC00343-208ENST00000599264 NBR1Q14596 966 aa15.42■□□□□ 0.06
LINC00343-208ENST00000599264 ZBED2Q9BTP6 218 aa15.41■□□□□ 0.06
LINC00343-208ENST00000599264 HRO43593 1189 aa15.4■□□□□ 0.06
LINC00343-208ENST00000599264 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
LINC00343-208ENST00000599264 C6orf132Q5T0Z8 1188 aa15.39■□□□□ 0.05
LINC00343-208ENST00000599264 GRXCR2A6NFK2 248 aa15.38■□□□□ 0.05
LINC00343-208ENST00000599264 KCNV2Q8TDN2 545 aa15.38■□□□□ 0.05
LINC00343-208ENST00000599264 MAP3K7O43318 606 aa15.37■□□□□ 0.05
LINC00343-208ENST00000599264 EN1Q05925 392 aaPredicted RBP15.36■□□□□ 0.05
LINC00343-208ENST00000599264 NBPF3Q9H094 633 aa15.34■□□□□ 0.05
LINC00343-208ENST00000599264 COL9A1P20849 921 aa15.32■□□□□ 0.04
LINC00343-208ENST00000599264 GOLGA8CPA6NN73 597 aa15.3■□□□□ 0.04
LINC00343-208ENST00000599264 MRPL50Q8N5N7 158 aaKnown RBP15.3■□□□□ 0.04
LINC00343-208ENST00000599264 RABGEF1Q9UJ41 708 aa15.29■□□□□ 0.04
LINC00343-208ENST00000599264 BHMG1C9JSJ3 638 aaPredicted RBP15.28■□□□□ 0.04
LINC00343-208ENST00000599264 ONECUT3O60422 494 aaPredicted RBP15.28■□□□□ 0.04
LINC00343-208ENST00000599264 CERKQ8TCT0 537 aa15.27■□□□□ 0.04
LINC00343-208ENST00000599264 TSR1Q2NL82 804 aaKnown RBP15.26■□□□□ 0.03
LINC00343-208ENST00000599264 PROX2Q3B8N5 592 aa15.26■□□□□ 0.03
LINC00343-208ENST00000599264 OSBPP22059 807 aa15.25■□□□□ 0.03
LINC00343-208ENST00000599264 HCSTQ9UBK5 93 aa15.25■□□□□ 0.03
LINC00343-208ENST00000599264 KCTD12Q96CX2 325 aaKnown RBP15.24■□□□□ 0.03
LINC00343-208ENST00000599264 TRIM6-TRIM34B2RNG4 842 aa15.22■□□□□ 0.03
LINC00343-208ENST00000599264 VSIG10Q8N0Z9 540 aa15.21■□□□□ 0.03
LINC00343-208ENST00000599264 KIAA1468Q9P260 1216 aa15.21■□□□□ 0.03
LINC00343-208ENST00000599264 LAPTM4BQ86VI4 370 aa15.19■□□□□ 0.02
LINC00343-208ENST00000599264 PACS2Q86VP3 889 aa15.19■□□□□ 0.02
LINC00343-208ENST00000599264 MLLT3P42568 568 aaPredicted RBP15.17■□□□□ 0.02
LINC00343-208ENST00000599264 PRIM1P49642 420 aaKnown RBP15.17■□□□□ 0.02
LINC00343-208ENST00000599264 WNT2BQ93097 391 aa15.17■□□□□ 0.02
LINC00343-208ENST00000599264 PRSS12P56730 875 aa15.15■□□□□ 0.02
LINC00343-208ENST00000599264 CDCA7LQ96GN5 454 aa15.15■□□□□ 0.02
LINC00343-208ENST00000599264 KDM2AQ9Y2K7 1162 aa15.15■□□□□ 0.02
LINC00343-208ENST00000599264 ANKK1Q8NFD2 765 aa15.13■□□□□ 0.01
LINC00343-208ENST00000599264 SEMA3EO15041 775 aa15.11■□□□□ 0.01
LINC00343-208ENST00000599264 CDHR5Q9HBB8 845 aa15.11■□□□□ 0.01
LINC00343-208ENST00000599264 SMYD5Q6GMV2 418 aa15.1■□□□□ 0.01
LINC00343-208ENST00000599264 THSD4Q6ZMP0 1018 aa15.1■□□□□ 0.01
LINC00343-208ENST00000599264 RBM27Q9P2N5 1060 aaKnown RBP15.1■□□□□ 0.01
LINC00343-208ENST00000599264 TSKSQ9UJT2 592 aa15.1■□□□□ 0.01
LINC00343-208ENST00000599264 PTPN5P54829 565 aa15.09■□□□□ 0.01
LINC00343-208ENST00000599264 FAM98CQ17RN3 349 aaKnown RBP15.09■□□□□ 0.01
LINC00343-208ENST00000599264 SEPT9Q9UHD8 586 aaPredicted RBP15.09■□□□□ 0.01
LINC00343-208ENST00000599264 ZFRQ96KR1 1074 aaKnown RBP15.07■□□□□ 0
LINC00343-208ENST00000599264 NBPF26B4DH59 902 aa15.06■□□□□ 0
LINC00343-208ENST00000599264 NUTM2FA1L443 756 aa15.03■□□□□ -0
LINC00343-208ENST00000599264 NPDC1Q9NQX5 325 aaPredicted RBP15.03■□□□□ -0
LINC00343-208ENST00000599264 TESPA1A2RU30 521 aaPredicted RBP15.02■□□□□ -0
LINC00343-208ENST00000599264 TATDN2Q93075 761 aa15.01□□□□□ -0.01
LINC00343-208ENST00000599264 PNMA3Q9UL41 463 aa15.01□□□□□ -0.01
LINC00343-208ENST00000599264 SOWAHBA6NEL2 793 aa15□□□□□ -0.01
LINC00343-208ENST00000599264 LRCH3Q96II8 777 aa14.99□□□□□ -0.01
LINC00343-208ENST00000599264 FAM198AQ9UFP1 575 aa14.99□□□□□ -0.01
LINC00343-208ENST00000599264 PADI6Q6TGC4 694 aa14.98□□□□□ -0.01
LINC00343-208ENST00000599264 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.98□□□□□ -0.01
LINC00343-208ENST00000599264 HDGFP51858 240 aaKnown RBP14.97□□□□□ -0.01
LINC00343-208ENST00000599264 PTGDRQ13258 359 aa14.97□□□□□ -0.01
LINC00343-208ENST00000599264 SMAPO00193 183 aa14.96□□□□□ -0.01
LINC00343-208ENST00000599264 BCAMP50895 628 aa14.96□□□□□ -0.01
LINC00343-208ENST00000599264 NUDT18Q6ZVK8 323 aa14.96□□□□□ -0.01
LINC00343-208ENST00000599264 TTC13Q8NBP0 860 aa14.96□□□□□ -0.01
LINC00343-208ENST00000599264 PLA2G2EQ9NZK7 142 aa14.96□□□□□ -0.01
LINC00343-208ENST00000599264 FCHSD2O94868 740 aa14.95□□□□□ -0.02
LINC00343-208ENST00000599264 NYAP1Q6ZVC0 841 aa14.94□□□□□ -0.02
LINC00343-208ENST00000599264 TULP1O00294 542 aaPredicted RBP14.93□□□□□ -0.02
LINC00343-208ENST00000599264 TSR3Q9UJK0 312 aaKnown RBP14.91□□□□□ -0.02
LINC00343-208ENST00000599264 RBM26Q5T8P6 1007 aaKnown RBP14.88□□□□□ -0.03
LINC00343-208ENST00000599264 SAMD7Q7Z3H4 446 aa14.88□□□□□ -0.03
LINC00343-208ENST00000599264 HPS5Q9UPZ3 1129 aa14.88□□□□□ -0.03
LINC00343-208ENST00000599264 C3orf80F5H4A9 247 aa14.87□□□□□ -0.03
LINC00343-208ENST00000599264 SLC4A3P48751 1232 aa14.86□□□□□ -0.03
LINC00343-208ENST00000599264 PPP4CP60510 307 aa14.86□□□□□ -0.03
LINC00343-208ENST00000599264 HIC1Q14526 733 aa14.86□□□□□ -0.03
LINC00343-208ENST00000599264 WBP1LQ9NX94 342 aa14.86□□□□□ -0.03
LINC00343-208ENST00000599264 RBM46Q8TBY0 533 aaKnown RBP14.85□□□□□ -0.03
LINC00343-208ENST00000599264 NECTIN2Q92692 538 aa14.83□□□□□ -0.04
LINC00343-208ENST00000599264 EYA1Q99502 592 aa14.82□□□□□ -0.04
LINC00343-208ENST00000599264 RNF40O75150 1001 aa14.8□□□□□ -0.04
LINC00343-208ENST00000599264 SLF2Q8IX21 1173 aa14.8□□□□□ -0.04
LINC00343-208ENST00000599264 ADGRG1Q9Y653 693 aa14.8□□□□□ -0.04
LINC00343-208ENST00000599264 GNPATO15228 680 aa14.78□□□□□ -0.04
LINC00343-208ENST00000599264 DNAJB2P25686 324 aa14.78□□□□□ -0.04
LINC00343-208ENST00000599264 GPIHBP1Q8IV16 184 aa14.78□□□□□ -0.04
LINC00343-208ENST00000599264 OATP04181 439 aa14.77□□□□□ -0.05
LINC00343-208ENST00000599264 SWT1Q5T5J6 900 aaKnown RBP14.77□□□□□ -0.05
LINC00343-208ENST00000599264 IFFO2Q5TF58 517 aa14.77□□□□□ -0.05
LINC00343-208ENST00000599264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.71□□□□□ -0.05
LINC00343-208ENST00000599264 RCCD1A6NED2 376 aa14.71□□□□□ -0.05
LINC00343-208ENST00000599264 ITGBL1O95965 494 aaPredicted RBP14.71□□□□□ -0.05
LINC00343-208ENST00000599264 FAM161AQ3B820 660 aa14.71□□□□□ -0.05
LINC00343-208ENST00000599264 TMEM134Q9H6X4 195 aa14.7□□□□□ -0.06
LINC00343-208ENST00000599264 GPR37O15354 613 aa14.69□□□□□ -0.06
LINC00343-208ENST00000599264 KCNC4Q03721 635 aa14.68□□□□□ -0.06
LINC00343-208ENST00000599264 PXYLP1Q8TE99 480 aa14.67□□□□□ -0.06
LINC00343-208ENST00000599264 PRR14Q9BWN1 585 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms