RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 USP47Q96K76 1375 aa19.9■□□□□ 0.78
PDE4C-211ENST00000597360 MYBBP1AQ9BQG0 1328 aaKnown RBP19.9■□□□□ 0.78
PDE4C-211ENST00000597360 NCOA2Q15596 1464 aa19.89■□□□□ 0.77
PDE4C-211ENST00000597360 ST20-MTHFSA0A0A6YYL1 179 aa19.88■□□□□ 0.77
PDE4C-211ENST00000597360 KIAA0556O60303 1618 aa19.88■□□□□ 0.77
PDE4C-211ENST00000597360 PDE3BQ13370 1112 aa19.88■□□□□ 0.77
PDE4C-211ENST00000597360 KTN1Q86UP2 1357 aaKnown RBP19.87■□□□□ 0.77
PDE4C-211ENST00000597360 CASKIN1Q8WXD9 1431 aa19.87■□□□□ 0.77
PDE4C-211ENST00000597360 MYH16Q9H6N6 1097 aa19.86■□□□□ 0.77
PDE4C-211ENST00000597360 RRP9O43818 475 aaKnown RBP19.86■□□□□ 0.77
PDE4C-211ENST00000597360 NLRP13Q86W25 1043 aa19.86■□□□□ 0.77
PDE4C-211ENST00000597360 MAP3K1Q13233 1512 aa19.86■□□□□ 0.77
PDE4C-211ENST00000597360 WDR43Q15061 677 aaKnown RBP eCLIP19.85■□□□□ 0.77
PDE4C-211ENST00000597360 RALBP1Q15311 655 aa19.85■□□□□ 0.77
PDE4C-211ENST00000597360 C8orf34Q49A92 452 aa19.84■□□□□ 0.77
PDE4C-211ENST00000597360 FYCO1Q9BQS8 1478 aa19.84■□□□□ 0.77
PDE4C-211ENST00000597360 KIF15Q9NS87 1388 aa19.83■□□□□ 0.76
PDE4C-211ENST00000597360 XRCC6P12956 609 aaKnown RBP eCLIP19.82■□□□□ 0.76
PDE4C-211ENST00000597360 PRG4Q92954 1404 aaPredicted RBP19.82■□□□□ 0.76
PDE4C-211ENST00000597360 CARMIL2Q6F5E8 1435 aa19.8■□□□□ 0.76
PDE4C-211ENST00000597360 RGL3Q3MIN7 710 aa19.79■□□□□ 0.76
PDE4C-211ENST00000597360 RBM10P98175 930 aaKnown RBP19.79■□□□□ 0.76
PDE4C-211ENST00000597360 DHX29Q7Z478 1369 aaKnown RBP19.78■□□□□ 0.76
PDE4C-211ENST00000597360 LRRIQ1Q96JM4 1722 aa19.77■□□□□ 0.76
PDE4C-211ENST00000597360 ZBTB7CA1YPR0 619 aa19.77■□□□□ 0.75
PDE4C-211ENST00000597360 PKD2Q13563 968 aa19.77■□□□□ 0.75
PDE4C-211ENST00000597360 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
PDE4C-211ENST00000597360 PTPN23Q9H3S7 1636 aa19.76■□□□□ 0.75
PDE4C-211ENST00000597360 ERCC6L2Q5T890 1561 aa19.75■□□□□ 0.75
PDE4C-211ENST00000597360 ANP32BQ92688 251 aaKnown RBP19.75■□□□□ 0.75
PDE4C-211ENST00000597360 BRD4O60885 1362 aaPredicted RBP19.74■□□□□ 0.75
PDE4C-211ENST00000597360 SEC24BO95487 1268 aa19.74■□□□□ 0.75
PDE4C-211ENST00000597360 SHROOM2Q13796 1616 aa19.74■□□□□ 0.75
PDE4C-211ENST00000597360 CCDC146Q8IYE0 955 aa19.73■□□□□ 0.75
PDE4C-211ENST00000597360 PLB1Q6P1J6 1458 aa19.73■□□□□ 0.75
PDE4C-211ENST00000597360 ESPNB1AK53 854 aa19.73■□□□□ 0.75
PDE4C-211ENST00000597360 FAM13BQ9NYF5 915 aa19.73■□□□□ 0.75
PDE4C-211ENST00000597360 CLCN1P35523 988 aa19.73■□□□□ 0.75
PDE4C-211ENST00000597360 MYOM3Q5VTT5 1437 aa19.73■□□□□ 0.75
PDE4C-211ENST00000597360 CFAP43Q8NDM7 1665 aa19.72■□□□□ 0.75
PDE4C-211ENST00000597360 TRAK2O60296 914 aa19.72■□□□□ 0.75
PDE4C-211ENST00000597360 NEUROD2Q15784 382 aa19.71■□□□□ 0.75
PDE4C-211ENST00000597360 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
PDE4C-211ENST00000597360 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
PDE4C-211ENST00000597360 CDK13Q14004 1512 aaKnown RBP19.69■□□□□ 0.74
PDE4C-211ENST00000597360 SLC24A1O60721 1099 aa19.69■□□□□ 0.74
PDE4C-211ENST00000597360 MFAP1P55081 439 aaKnown RBP19.69■□□□□ 0.74
PDE4C-211ENST00000597360 FOXD4L1Q9NU39 408 aa19.69■□□□□ 0.74
PDE4C-211ENST00000597360 ADAMTS8Q9UP79 889 aa19.69■□□□□ 0.74
PDE4C-211ENST00000597360 COG6Q9Y2V7 657 aa19.69■□□□□ 0.74
PDE4C-211ENST00000597360 GOLGA2Q08379 1002 aa19.68■□□□□ 0.74
PDE4C-211ENST00000597360 EPRSP07814 1512 aaKnown RBP19.68■□□□□ 0.74
PDE4C-211ENST00000597360 HECW1Q76N89 1606 aa19.68■□□□□ 0.74
PDE4C-211ENST00000597360 NUP153P49790 1475 aaKnown RBP19.68■□□□□ 0.74
PDE4C-211ENST00000597360 PTPRGP23470 1445 aa19.67■□□□□ 0.74
PDE4C-211ENST00000597360 RAPGEF6Q8TEU7 1601 aa19.67■□□□□ 0.74
PDE4C-211ENST00000597360 MCM4P33991 863 aa19.67■□□□□ 0.74
PDE4C-211ENST00000597360 BCAR3O75815 825 aa19.67■□□□□ 0.74
PDE4C-211ENST00000597360 NCLP19338 710 aaKnown RBP19.67■□□□□ 0.74
PDE4C-211ENST00000597360 ZNF644Q9H582 1327 aaPredicted RBP19.67■□□□□ 0.74
PDE4C-211ENST00000597360 ROCK2O75116 1388 aaKnown RBP19.66■□□□□ 0.74
PDE4C-211ENST00000597360 MRE11P49959 708 aa19.66■□□□□ 0.74
PDE4C-211ENST00000597360 KIAA1211Q6ZU35 1233 aa19.65■□□□□ 0.74
PDE4C-211ENST00000597360 MSNP26038 577 aaKnown RBP19.64■□□□□ 0.74
PDE4C-211ENST00000597360 GRPEL1Q9HAV7 217 aa19.64■□□□□ 0.74
PDE4C-211ENST00000597360 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.73
PDE4C-211ENST00000597360 KDM5BQ9UGL1 1544 aa19.64■□□□□ 0.73
PDE4C-211ENST00000597360 PANK3Q9H999 370 aa19.64■□□□□ 0.73
PDE4C-211ENST00000597360 CLUAP1Q96AJ1 413 aa19.63■□□□□ 0.73
PDE4C-211ENST00000597360 ANKRD30BQ9BXX2 1392 aa19.63■□□□□ 0.73
PDE4C-211ENST00000597360 PANK1Q8TE04 598 aa19.63■□□□□ 0.73
PDE4C-211ENST00000597360 TBC1D2Q9BYX2 928 aa19.62■□□□□ 0.73
PDE4C-211ENST00000597360 KDM2BQ8NHM5 1336 aa19.62■□□□□ 0.73
PDE4C-211ENST00000597360 IGHDP01880 384 aa19.62■□□□□ 0.73
PDE4C-211ENST00000597360 HSCBQ8IWL3 235 aa19.6■□□□□ 0.73
PDE4C-211ENST00000597360 ABCA8O94911 1581 aa19.6■□□□□ 0.73
PDE4C-211ENST00000597360 BCL2L13Q9BXK5 485 aa19.59■□□□□ 0.73
PDE4C-211ENST00000597360 R3HCC1Q9Y3T6 440 aaKnown RBP19.58■□□□□ 0.73
PDE4C-211ENST00000597360 LRPPRCP42704 1394 aaKnown RBP19.58■□□□□ 0.73
PDE4C-211ENST00000597360 KNSTRNQ9Y448 316 aa19.58■□□□□ 0.72
PDE4C-211ENST00000597360 CHMP5Q9NZZ3 219 aa19.58■□□□□ 0.72
PDE4C-211ENST00000597360 PRDM10Q9NQV6 1147 aa19.57■□□□□ 0.72
PDE4C-211ENST00000597360 HSP90AB1P08238 724 aaKnown RBP19.56■□□□□ 0.72
PDE4C-211ENST00000597360 SPATA31E1Q6ZUB1 1445 aa19.56■□□□□ 0.72
PDE4C-211ENST00000597360 APAF1O14727 1248 aa19.55■□□□□ 0.72
PDE4C-211ENST00000597360 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
PDE4C-211ENST00000597360 PDCL3Q9H2J4 239 aa19.55■□□□□ 0.72
PDE4C-211ENST00000597360 TPM2P07951 284 aa19.55■□□□□ 0.72
PDE4C-211ENST00000597360 MAPK8IP3Q9UPT6 1336 aa19.54■□□□□ 0.72
PDE4C-211ENST00000597360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.72
PDE4C-211ENST00000597360 RPRD2Q5VT52 1461 aaKnown RBP19.54■□□□□ 0.72
PDE4C-211ENST00000597360 MIA2Q96PC5 1412 aa19.54■□□□□ 0.72
PDE4C-211ENST00000597360 ATP10BO94823 1461 aa19.53■□□□□ 0.72
PDE4C-211ENST00000597360 EHBP1L1Q8N3D4 1523 aa19.53■□□□□ 0.72
PDE4C-211ENST00000597360 DUSP27Q5VZP5 1158 aa19.52■□□□□ 0.72
PDE4C-211ENST00000597360 ZHX1Q9UKY1 873 aaPredicted RBP19.52■□□□□ 0.71
PDE4C-211ENST00000597360 ERBB4Q15303 1308 aa19.52■□□□□ 0.71
PDE4C-211ENST00000597360 CFDP1Q9UEE9 299 aaPredicted RBP19.51■□□□□ 0.71
PDE4C-211ENST00000597360 DDX11L8A8MPP1 907 aa19.5■□□□□ 0.71
PDE4C-211ENST00000597360 DNTTIP2Q5QJE6 756 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms