RNA–Protein interactions for RNA: ENST00000595519.5

TRPM4-205, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,702 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-205ENST00000595519 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
TRPM4-205ENST00000595519 ANKRD30AQ9BXX3 1397 aa19.65■□□□□ 0.74
TRPM4-205ENST00000595519 FRAT1Q92837 279 aaPredicted RBP19.65■□□□□ 0.74
TRPM4-205ENST00000595519 CLASP1Q7Z460 1538 aa19.64■□□□□ 0.74
TRPM4-205ENST00000595519 C9orf84Q5VXU9 1444 aa19.64■□□□□ 0.73
TRPM4-205ENST00000595519 VSIG10Q8N0Z9 540 aa19.64■□□□□ 0.73
TRPM4-205ENST00000595519 EXOC6Q8TAG9 804 aa19.64■□□□□ 0.73
TRPM4-205ENST00000595519 ZBED9Q6R2W3 1325 aa19.63■□□□□ 0.73
TRPM4-205ENST00000595519 PKNOX2Q96KN3 472 aa19.63■□□□□ 0.73
TRPM4-205ENST00000595519 ANKRD50Q9ULJ7 1429 aa19.63■□□□□ 0.73
TRPM4-205ENST00000595519 KIAA1107Q9UPP5 1409 aa19.63■□□□□ 0.73
TRPM4-205ENST00000595519 TTC37Q6PGP7 1564 aa19.62■□□□□ 0.73
TRPM4-205ENST00000595519 ABCC2Q92887 1545 aa19.62■□□□□ 0.73
TRPM4-205ENST00000595519 SPATA31E1Q6ZUB1 1445 aa19.61■□□□□ 0.73
TRPM4-205ENST00000595519 GLIPR1L2Q4G1C9 344 aa19.61■□□□□ 0.73
TRPM4-205ENST00000595519 NUDCQ9Y266 331 aa19.61■□□□□ 0.73
TRPM4-205ENST00000595519 MAST1Q9Y2H9 1570 aa19.6■□□□□ 0.73
TRPM4-205ENST00000595519 SLC4A1APQ9BWU0 796 aaKnown RBP19.6■□□□□ 0.73
TRPM4-205ENST00000595519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.6■□□□□ 0.73
TRPM4-205ENST00000595519 NFKBIBQ15653 356 aa19.59■□□□□ 0.73
TRPM4-205ENST00000595519 NAP1L5Q96NT1 182 aaPredicted RBP19.59■□□□□ 0.73
TRPM4-205ENST00000595519 NBPF8Q3BBV2 869 aa19.59■□□□□ 0.73
TRPM4-205ENST00000595519 ZNF777Q9ULD5 760 aaPredicted RBP19.58■□□□□ 0.73
TRPM4-205ENST00000595519 USP35Q9P2H5 1018 aa19.58■□□□□ 0.72
TRPM4-205ENST00000595519 MYO5CQ9NQX4 1742 aa19.57■□□□□ 0.72
TRPM4-205ENST00000595519 CCDC141Q6ZP82 1450 aa19.56■□□□□ 0.72
TRPM4-205ENST00000595519 PLIN1O60240 522 aa19.55■□□□□ 0.72
TRPM4-205ENST00000595519 C11orf95C9JLR9 678 aaPredicted RBP19.53■□□□□ 0.72
TRPM4-205ENST00000595519 ZCCHC11Q5TAX3 1644 aaKnown RBP19.53■□□□□ 0.72
TRPM4-205ENST00000595519 RGS3P49796 1198 aa19.53■□□□□ 0.72
TRPM4-205ENST00000595519 UHRF1BP1LA0JNW5 1464 aa19.52■□□□□ 0.72
TRPM4-205ENST00000595519 DDRGK1Q96HY6 314 aa19.52■□□□□ 0.72
TRPM4-205ENST00000595519 TCERG1O14776 1098 aaKnown RBP19.52■□□□□ 0.72
TRPM4-205ENST00000595519 PLXNC1O60486 1568 aa19.52■□□□□ 0.72
TRPM4-205ENST00000595519 UNC13BO14795 1591 aa19.52■□□□□ 0.71
TRPM4-205ENST00000595519 SYCP2Q9BX26 1530 aa19.51■□□□□ 0.71
TRPM4-205ENST00000595519 KIF15Q9NS87 1388 aa19.5■□□□□ 0.71
TRPM4-205ENST00000595519 UHRF1BP1Q6BDS2 1440 aa19.49■□□□□ 0.71
TRPM4-205ENST00000595519 ARHGEF12Q9NZN5 1544 aa19.49■□□□□ 0.71
TRPM4-205ENST00000595519 CNTLNQ9NXG0 1405 aa19.49■□□□□ 0.71
TRPM4-205ENST00000595519 FRAT2O75474 233 aaPredicted RBP19.49■□□□□ 0.71
TRPM4-205ENST00000595519 HNRNPMP52272 730 aaKnown RBP eCLIP19.48■□□□□ 0.71
TRPM4-205ENST00000595519 KDM5CP41229 1560 aa19.48■□□□□ 0.71
TRPM4-205ENST00000595519 CCDC7Q96M83 1385 aa19.48■□□□□ 0.71
TRPM4-205ENST00000595519 PKD2Q13563 968 aa19.48■□□□□ 0.71
TRPM4-205ENST00000595519 BCORL1Q5H9F3 1711 aa19.47■□□□□ 0.71
TRPM4-205ENST00000595519 RSPH6AQ9H0K4 717 aa19.47■□□□□ 0.71
TRPM4-205ENST00000595519 RSPH4AQ5TD94 716 aa19.46■□□□□ 0.71
TRPM4-205ENST00000595519 ARHGAP5Q13017 1502 aa19.46■□□□□ 0.71
TRPM4-205ENST00000595519 FAM135AQ9P2D6 1515 aa19.46■□□□□ 0.71
TRPM4-205ENST00000595519 NUP155O75694 1391 aa19.45■□□□□ 0.7
TRPM4-205ENST00000595519 TSPY4P0CV99 314 aa19.45■□□□□ 0.7
TRPM4-205ENST00000595519 TSPY10P0CW01 314 aa19.45■□□□□ 0.7
TRPM4-205ENST00000595519 BACH2Q9BYV9 841 aa19.43■□□□□ 0.7
TRPM4-205ENST00000595519 RCAN3Q9UKA8 241 aa19.43■□□□□ 0.7
TRPM4-205ENST00000595519 SLKQ9H2G2 1235 aaPredicted RBP19.43■□□□□ 0.7
TRPM4-205ENST00000595519 IQGAP3Q86VI3 1631 aa19.43■□□□□ 0.7
TRPM4-205ENST00000595519 PLEKHH2Q8IVE3 1493 aa19.42■□□□□ 0.7
TRPM4-205ENST00000595519 MAGI2Q86UL8 1455 aa19.42■□□□□ 0.7
TRPM4-205ENST00000595519 RALGAPBQ86X10 1494 aa19.42■□□□□ 0.7
TRPM4-205ENST00000595519 GZF1Q9H116 711 aaPredicted RBP19.41■□□□□ 0.7
TRPM4-205ENST00000595519 PLCH2O75038 1416 aa19.4■□□□□ 0.7
TRPM4-205ENST00000595519 ABCC1P33527 1531 aa19.39■□□□□ 0.7
TRPM4-205ENST00000595519 SPRYD3Q8NCJ5 442 aa19.39■□□□□ 0.7
TRPM4-205ENST00000595519 RRP1P56182 461 aaKnown RBP19.39■□□□□ 0.69
TRPM4-205ENST00000595519 ARAP3Q8WWN8 1544 aa19.38■□□□□ 0.69
TRPM4-205ENST00000595519 KIF7Q2M1P5 1343 aa19.38■□□□□ 0.69
TRPM4-205ENST00000595519 DUOX2Q9NRD8 1548 aa19.36■□□□□ 0.69
TRPM4-205ENST00000595519 WASHC2CQ9Y4E1 1318 aa19.35■□□□□ 0.69
TRPM4-205ENST00000595519 PLA2R1Q13018 1463 aa19.35■□□□□ 0.69
TRPM4-205ENST00000595519 TRPM1Q7Z4N2 1603 aa19.34■□□□□ 0.69
TRPM4-205ENST00000595519 HSP90AA2PQ14568 343 aaPredicted RBP19.34■□□□□ 0.69
TRPM4-205ENST00000595519 ZMYND15Q9H091 742 aa19.34■□□□□ 0.69
TRPM4-205ENST00000595519 KDM2AQ9Y2K7 1162 aa19.34■□□□□ 0.69
TRPM4-205ENST00000595519 USP47Q96K76 1375 aa19.33■□□□□ 0.68
TRPM4-205ENST00000595519 PNNQ9H307 717 aaKnown RBP19.32■□□□□ 0.68
TRPM4-205ENST00000595519 ERBINQ96RT1 1412 aa19.32■□□□□ 0.68
TRPM4-205ENST00000595519 ATP10AO60312 1499 aa19.32■□□□□ 0.68
TRPM4-205ENST00000595519 CRBNQ96SW2 442 aa19.32■□□□□ 0.68
TRPM4-205ENST00000595519 DCAF11Q8TEB1 546 aa19.31■□□□□ 0.68
TRPM4-205ENST00000595519 CDCA7LQ96GN5 454 aa19.31■□□□□ 0.68
TRPM4-205ENST00000595519 HSP90AA1P07900 732 aaKnown RBP19.3■□□□□ 0.68
TRPM4-205ENST00000595519 DHX29Q7Z478 1369 aaKnown RBP19.3■□□□□ 0.68
TRPM4-205ENST00000595519 ABCA9Q8IUA7 1624 aa19.3■□□□□ 0.68
TRPM4-205ENST00000595519 E9PCH4 1651 aa19.29■□□□□ 0.68
TRPM4-205ENST00000595519 LAMC1P11047 1609 aa19.28■□□□□ 0.68
TRPM4-205ENST00000595519 ARID3AQ99856 593 aa19.28■□□□□ 0.68
TRPM4-205ENST00000595519 POGKQ9P215 609 aa19.28■□□□□ 0.68
TRPM4-205ENST00000595519 DEPDC5O75140 1603 aa19.27■□□□□ 0.68
TRPM4-205ENST00000595519 FAM43AQ8N2R8 423 aa19.26■□□□□ 0.67
TRPM4-205ENST00000595519 TRAPPC8Q9Y2L5 1435 aa19.26■□□□□ 0.67
TRPM4-205ENST00000595519 ZFYVE16Q7Z3T8 1539 aa19.26■□□□□ 0.67
TRPM4-205ENST00000595519 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
TRPM4-205ENST00000595519 PRAG1Q86YV5 1406 aa19.24■□□□□ 0.67
TRPM4-205ENST00000595519 RTEL1-TNFRSF6BF6WH68 1400 aa19.24■□□□□ 0.67
TRPM4-205ENST00000595519 MS4A1P11836 297 aa19.23■□□□□ 0.67
TRPM4-205ENST00000595519 INO80Q9ULG1 1556 aaPredicted RBP19.23■□□□□ 0.67
TRPM4-205ENST00000595519 A2MP01023 1474 aa19.23■□□□□ 0.67
TRPM4-205ENST00000595519 WDR7Q9Y4E6 1490 aa19.23■□□□□ 0.67
TRPM4-205ENST00000595519 CCDC144AA2RUR9 1427 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms